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The map label for this gene is yqjF [H]

Identifier: 22127486

GI number: 22127486

Start: 4005016

End: 4005426

Strand: Direct

Name: yqjF [H]

Synonym: y3612

Alternate gene names: 22127486

Gene position: 4005016-4005426 (Clockwise)

Preceding gene: 22127485

Following gene: 22127487

Centisome position: 87.05

GC content: 49.39

Gene sequence:

>411_bases
TTGGAGAAGTTATCGATGAACAAATTACAAGATACTGGCCTGTTGGTCGCTCGCATTCTCATGCCAATCATCTTTATTGT
GGCCGGTTACGGCAAAATGGGCGATGCCTATGCCGGGACCCAACAATATATGCAAGCGATGGGCGTTCCTGGCTTTTTCC
TGCCACTGACCATTTTATTGGAATTTGGTGGTGGCCTGGCCATTCTGTTTGGTTTCCTGACCCGCACCACCTCGCTGTTC
ATTGCCGGGTTCACTCTCCTGACAGCGTTTATCTTCCACACTGACTTTACGGATAGCACTAACCAACTGATGTTCATGAA
GAACCTGAGCATCGCAGGGGGTTTCTTGGTATTGGCGATGGCTGGCCCAGGTGGTTTTAGCATCGACCGCTTACTGGGTA
AAAAGTGGTAA

Upstream 100 bases:

>100_bases
CCTGCGGGCCACCACACATGTCGCTTGAAGTCTGACGGGTATAAAACTCTGTTGTTAACAGTTAATGCTCATAAATGTTA
GTCATTAATCAACACCGTCT

Downstream 100 bases:

>100_bases
TCAGGGTTTAATCGCGATAATGCATGATAGTTAATATCAGCGATACCCTATCCATCCGGTAGGGTATTTTTTTAAGGGGG
ATTTCATGGGGCAACTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MEKLSMNKLQDTGLLVARILMPIIFIVAGYGKMGDAYAGTQQYMQAMGVPGFFLPLTILLEFGGGLAILFGFLTRTTSLF
IAGFTLLTAFIFHTDFTDSTNQLMFMKNLSIAGGFLVLAMAGPGGFSIDRLLGKKW

Sequences:

>Translated_136_residues
MEKLSMNKLQDTGLLVARILMPIIFIVAGYGKMGDAYAGTQQYMQAMGVPGFFLPLTILLEFGGGLAILFGFLTRTTSLF
IAGFTLLTAFIFHTDFTDSTNQLMFMKNLSIAGGFLVLAMAGPGGFSIDRLLGKKW
>Mature_136_residues
MEKLSMNKLQDTGLLVARILMPIIFIVAGYGKMGDAYAGTQQYMQAMGVPGFFLPLTILLEFGGGLAILFGFLTRTTSLF
IAGFTLLTAFIFHTDFTDSTNQLMFMKNLSIAGGFLVLAMAGPGGFSIDRLLGKKW

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI87082210, Length=131, Percent_Identity=75.5725190839695, Blast_Score=201, Evalue=1e-53,
Organism=Escherichia coli, GI145693171, Length=125, Percent_Identity=40.8, Blast_Score=76, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14776; Mature: 14776

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLSMNKLQDTGLLVARILMPIIFIVAGYGKMGDAYAGTQQYMQAMGVPGFFLPLTILL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
EFGGGLAILFGFLTRTTSLFIAGFTLLTAFIFHTDFTDSTNQLMFMKNLSIAGGFLVLAM
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEE
AGPGGFSIDRLLGKKW
ECCCCCHHHHHHCCCC
>Mature Secondary Structure
MEKLSMNKLQDTGLLVARILMPIIFIVAGYGKMGDAYAGTQQYMQAMGVPGFFLPLTILL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
EFGGGLAILFGFLTRTTSLFIAGFTLLTAFIFHTDFTDSTNQLMFMKNLSIAGGFLVLAM
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEE
AGPGGFSIDRLLGKKW
ECCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]