Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is yqjK [H]
Identifier: 22127485
GI number: 22127485
Start: 4004443
End: 4004727
Strand: Direct
Name: yqjK [H]
Synonym: y3611
Alternate gene names: 22127485
Gene position: 4004443-4004727 (Clockwise)
Preceding gene: 22127484
Following gene: 22127486
Centisome position: 87.04
GC content: 52.28
Gene sequence:
>285_bases TTGAGCCGCCACCAGCTAGCATTGGAAAAAGAAGCATTACTGCGTGAGATCCAGCAACAACGTCTGGATCTCGCGGACAG TGCTGCTCGTTGGGTTGAAGTTACCGCGCCCTTCGATCGTGGCTGGGCACAGATTGTCAGTATGCGAAAATATTTGATAG CAGGCGGTAGCTTGGTGGCCTTATACAGTGTTCGCCACCCCAGTAAGTTGCTCCGCTGGTCACGACGTGCAGTTAGCACC TGGAGTACCCTTCAACTGTTTCGCCGCACTTTTTTATCACGCTAA
Upstream 100 bases:
>100_bases TCGGTGTTATCTGGACACTCACTAAAGTGCGTCATTCTACGTTGCTGGGTTCAACCCGTAAGCAGTTGGAAACTGACCGC GAGTTACTGGAGAAAGACCA
Downstream 100 bases:
>100_bases TCCCTTCCCCACATCCTTACCCTATAGGTATAGGTCTTATTGTTCATCAACTTAAGATGTTTCTGTTGGCTTCCCCCCAC TGCTAATTCAGTTTTTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSRHQLALEKEALLREIQQQRLDLADSAARWVEVTAPFDRGWAQIVSMRKYLIAGGSLVALYSVRHPSKLLRWSRRAVST WSTLQLFRRTFLSR
Sequences:
>Translated_94_residues MSRHQLALEKEALLREIQQQRLDLADSAARWVEVTAPFDRGWAQIVSMRKYLIAGGSLVALYSVRHPSKLLRWSRRAVST WSTLQLFRRTFLSR >Mature_93_residues SRHQLALEKEALLREIQQQRLDLADSAARWVEVTAPFDRGWAQIVSMRKYLIAGGSLVALYSVRHPSKLLRWSRRAVSTW STLQLFRRTFLSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789487, Length=82, Percent_Identity=42.6829268292683, Blast_Score=80, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10983; Mature: 10852
Theoretical pI: Translated: 12.01; Mature: 12.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHQLALEKEALLREIQQQRLDLADSAARWVEVTAPFDRGWAQIVSMRKYLIAGGSLVA CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCHHH LYSVRHPSKLLRWSRRAVSTWSTLQLFRRTFLSR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRHQLALEKEALLREIQQQRLDLADSAARWVEVTAPFDRGWAQIVSMRKYLIAGGSLVA CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCHHH LYSVRHPSKLLRWSRRAVSTWSTLQLFRRTFLSR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]