Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
---|---|
Accession | NC_004088 |
Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22127477
Identifier: 22127477
GI number: 22127477
Start: 4001039
End: 4001620
Strand: Direct
Name: 22127477
Synonym: y3603
Alternate gene names: NA
Gene position: 4001039-4001620 (Clockwise)
Preceding gene: 161484750
Following gene: 22127479
Centisome position: 86.96
GC content: 48.11
Gene sequence:
>582_bases GTGGCAACACTTTTTTATCTGGTTGCTTTGGGAGCGAAACGCAAATACATGCGCTGGTTGTTTGCTCTGTTTATTACCGT GTCTTGCTGGGCCAGTCTGGTCTCCGGCAATATGCTGTTGCCTCCCCATTCGACCCCATCTGGCGCAGCTTTATCCGCGT TGAGCACCGTTTATTCTGACAACCACTGCGCCAGTTATTCCCTCTCATCTTTTCACGCGCTTTCAGCCAAGCTACGTCTA CAAAATCAAGACGTATCCCCGCAATTGCGTTTGGTCGGGGTGTCGGTCAAAAAAACGGCGATTAAGAATAGACTGAGTGC GGCGCAATTTACGGGCTCTGCAAATCTTTCTTTACTGAATAACACTTGGCCAGCGGCTTATTTTGCTATCTCACGCAGCC ACCGGGCGGATGATATTTATAAACAACCACGGCAATCGCTGTCGCTGGTTAATTATTCCAACTGGATATTCCATGCAGCA ACACAGCAAAATCGTGTGGGCGGTTGGAAAGAGAGCAATACTCAATACAGCGGGATGCTTACCTATCACCATTATGACGC GATGGTTTTTATGCTTGCATAG
Upstream 100 bases:
>100_bases TCAACCAACGTCAGCATCACACCCGTTTTTAAACCATTGCTTAATTAATACTCAATGGATATCTATATTTCCCTGTTTCA TATCTCGCTATTTTGCTAAA
Downstream 100 bases:
>100_bases CATCAATGTAGCCATCATATCAATGTAGCCTGATATCATGACGGTTATAAATCATGACGGTTATAATCCGGTATTGCACA GTACCAACGCTGTCATCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MATLFYLVALGAKRKYMRWLFALFITVSCWASLVSGNMLLPPHSTPSGAALSALSTVYSDNHCASYSLSSFHALSAKLRL QNQDVSPQLRLVGVSVKKTAIKNRLSAAQFTGSANLSLLNNTWPAAYFAISRSHRADDIYKQPRQSLSLVNYSNWIFHAA TQQNRVGGWKESNTQYSGMLTYHHYDAMVFMLA
Sequences:
>Translated_193_residues MATLFYLVALGAKRKYMRWLFALFITVSCWASLVSGNMLLPPHSTPSGAALSALSTVYSDNHCASYSLSSFHALSAKLRL QNQDVSPQLRLVGVSVKKTAIKNRLSAAQFTGSANLSLLNNTWPAAYFAISRSHRADDIYKQPRQSLSLVNYSNWIFHAA TQQNRVGGWKESNTQYSGMLTYHHYDAMVFMLA >Mature_192_residues ATLFYLVALGAKRKYMRWLFALFITVSCWASLVSGNMLLPPHSTPSGAALSALSTVYSDNHCASYSLSSFHALSAKLRLQ NQDVSPQLRLVGVSVKKTAIKNRLSAAQFTGSANLSLLNNTWPAAYFAISRSHRADDIYKQPRQSLSLVNYSNWIFHAAT QQNRVGGWKESNTQYSGMLTYHHYDAMVFMLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21490; Mature: 21359
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLFYLVALGAKRKYMRWLFALFITVSCWASLVSGNMLLPPHSTPSGAALSALSTVYSD CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCC NHCASYSLSSFHALSAKLRLQNQDVSPQLRLVGVSVKKTAIKNRLSAAQFTGSANLSLLN CCCCCCCHHHHHHHHHEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEC NTWPAAYFAISRSHRADDIYKQPRQSLSLVNYSNWIFHAATQQNRVGGWKESNTQYSGML CCCCHHHEEECCCCCCHHHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCEEEEEE TYHHYDAMVFMLA EEEECCEEEEEEC >Mature Secondary Structure ATLFYLVALGAKRKYMRWLFALFITVSCWASLVSGNMLLPPHSTPSGAALSALSTVYSD HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCC NHCASYSLSSFHALSAKLRLQNQDVSPQLRLVGVSVKKTAIKNRLSAAQFTGSANLSLLN CCCCCCCHHHHHHHHHEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEC NTWPAAYFAISRSHRADDIYKQPRQSLSLVNYSNWIFHAATQQNRVGGWKESNTQYSGML CCCCHHHEEECCCCCCHHHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCEEEEEE TYHHYDAMVFMLA EEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA