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The map label for this gene is yqjA [H]

Identifier: 22127479

GI number: 22127479

Start: 4001898

End: 4002596

Strand: Direct

Name: yqjA [H]

Synonym: y3605

Alternate gene names: 22127479

Gene position: 4001898-4002596 (Clockwise)

Preceding gene: 22127477

Following gene: 22127480

Centisome position: 86.98

GC content: 50.36

Gene sequence:

>699_bases
ATGGATATCATTAAAGAACTCTTACATGCTCTATGGGCTCAAGACTATGAGACACTGGCGGACCCATCGCTGGTGTGGGC
CATCTATCTACTGCTGTTTGTGATACTTTTTTTGGAGAATGGCCTGCTTCCTGCTGCCTTTTTACCGGGTGATAGCCTAC
TGATTCTGGTCGGGGTGCTGATCGCCAAAGGTGCGATGAGTTTTCCAGTGACCCTGGTGGTCTTGACCACGGCAGCAAGC
CTTGGGTGTTGGGTAAGTTATATTCAGGGCCGATGGCTGGGGAATACGAAAGTTGTACAGGGGTGGCTGTCCCATCTGCC
AGCCCATTACCATCAACGCGCTCACAATCTTTTTCACCGCCATGGGTTATCCGCCCTGCTGGTTGGCCGTTTTCTGGCAT
TCGTCCGGACCTTATTGCCAACCATTGCCGGTCTTTCAGGCCTGGACAACGCCCGCTTCCAATTCTTTAACTGGATGAGT
GGGTTACTCTGGGTATTGATCTTGACCACCATGGGCTTCGCCTTTGGCAAGACACCGGTATTCCTGAGATATGAAGATGA
AGTGATGTTCGTCCTAATGTTACTGCCACTGGCGCTGCTGGTGATCGGTTTGTTTGGTTCTTTGTACGTGCTGTGGCGTA
AAAAAAATGCGACGCCCGCTAAAGTCAGTCATGACAATAAGAAAGGTAAGTCAGAGTGA

Upstream 100 bases:

>100_bases
CTTAAACACGAAAAGCCATCAGATCTCTTCGCAAGATCGTGTTTATAAACTAACGTACTTACCCATACGTATACAAACAA
TGACGTTTTAGGAATACCAG

Downstream 100 bases:

>100_bases
TCAACTTTAGGGGCCGTTTTGGCCGCCCGCTCTGGCACTATCTGGTACTGCCAGTGGTCCTCTTACTGCTGGCCGTCATC
TTATTGACACCAATGATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDIIKELLHALWAQDYETLADPSLVWAIYLLLFVILFLENGLLPAAFLPGDSLLILVGVLIAKGAMSFPVTLVVLTTAAS
LGCWVSYIQGRWLGNTKVVQGWLSHLPAHYHQRAHNLFHRHGLSALLVGRFLAFVRTLLPTIAGLSGLDNARFQFFNWMS
GLLWVLILTTMGFAFGKTPVFLRYEDEVMFVLMLLPLALLVIGLFGSLYVLWRKKNATPAKVSHDNKKGKSE

Sequences:

>Translated_232_residues
MDIIKELLHALWAQDYETLADPSLVWAIYLLLFVILFLENGLLPAAFLPGDSLLILVGVLIAKGAMSFPVTLVVLTTAAS
LGCWVSYIQGRWLGNTKVVQGWLSHLPAHYHQRAHNLFHRHGLSALLVGRFLAFVRTLLPTIAGLSGLDNARFQFFNWMS
GLLWVLILTTMGFAFGKTPVFLRYEDEVMFVLMLLPLALLVIGLFGSLYVLWRKKNATPAKVSHDNKKGKSE
>Mature_232_residues
MDIIKELLHALWAQDYETLADPSLVWAIYLLLFVILFLENGLLPAAFLPGDSLLILVGVLIAKGAMSFPVTLVVLTTAAS
LGCWVSYIQGRWLGNTKVVQGWLSHLPAHYHQRAHNLFHRHGLSALLVGRFLAFVRTLLPTIAGLSGLDNARFQFFNWMS
GLLWVLILTTMGFAFGKTPVFLRYEDEVMFVLMLLPLALLVIGLFGSLYVLWRKKNATPAKVSHDNKKGKSE

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1789481, Length=215, Percent_Identity=78.6046511627907, Blast_Score=332, Evalue=1e-92,
Organism=Escherichia coli, GI1789384, Length=215, Percent_Identity=63.7209302325581, Blast_Score=272, Evalue=2e-74,
Organism=Escherichia coli, GI1788656, Length=158, Percent_Identity=34.1772151898734, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25933; Mature: 25933

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIKELLHALWAQDYETLADPSLVWAIYLLLFVILFLENGLLPAAFLPGDSLLILVGVL
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHH
IAKGAMSFPVTLVVLTTAASLGCWVSYIQGRWLGNTKVVQGWLSHLPAHYHQRAHNLFHR
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
HGLSALLVGRFLAFVRTLLPTIAGLSGLDNARFQFFNWMSGLLWVLILTTMGFAFGKTPV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
FLRYEDEVMFVLMLLPLALLVIGLFGSLYVLWRKKNATPAKVSHDNKKGKSE
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDIIKELLHALWAQDYETLADPSLVWAIYLLLFVILFLENGLLPAAFLPGDSLLILVGVL
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHH
IAKGAMSFPVTLVVLTTAASLGCWVSYIQGRWLGNTKVVQGWLSHLPAHYHQRAHNLFHR
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
HGLSALLVGRFLAFVRTLLPTIAGLSGLDNARFQFFNWMSGLLWVLILTTMGFAFGKTPV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
FLRYEDEVMFVLMLLPLALLVIGLFGSLYVLWRKKNATPAKVSHDNKKGKSE
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]