Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is 22127447
Identifier: 22127447
GI number: 22127447
Start: 3956529
End: 3958814
Strand: Direct
Name: 22127447
Synonym: y3573
Alternate gene names: NA
Gene position: 3956529-3958814 (Clockwise)
Preceding gene: 22127446
Following gene: 22127455
Centisome position: 86.0
GC content: 54.72
Gene sequence:
>2286_bases ATGAATAACCATAAGATCTGGCGTTTATCCGCCGTTGCTGTTGCTTTACTGATTAGCGGTAATAGCTATGCCGATCAGAC CCTCCACTTCGCTCAGCAACCGCATAACACGGGCGATCATACTGTGATCGCCGCACCAGAGGTCAATAACTTTTCATTGG CAGATCTGACCGCCAACGCAGAAGGGCAAGCAGTGGATGCGACCAACGCAGGCGCACTGTCGCTGCGGGTTGAACCCACT CAAGGTGACGCTCAGGCGAATGGCGTACTGGTCACCTCCGGCACCTTTACTAATCAGGCTCAGGGCTCGATCACCGTGAG TGCCAGCAGTCAGGATCAACATGCTGTTGCCAGCGGGTTGCAGGCAACGGATGCCTATTGGTCCACTCTGCGTAATCAGG GTAGCATCCGTGCCACGAGCAACAGCCTACACGGCAGTGCAGAGGTCTATGGTATCCAGGCTGGCCTGGCCTTTTCCGAT GCCGCCGGGGATCACTACGGTGACCACATGATGTTGAGCAACGAGGGTGTGATGCAGGTGAGTGCCACGGCCGAGCAGGA CGCCTTTGCCAGCGGTATCTATACCAATGCCGGTAATGGCGTGGTCAACAATGGCCGTCTGGATGTCAGTGCTCATGCCA GTGCTGGCGATGCACGGGCAACCGGCCTGCATACCCTCTCTGCCAACCCAGGCGTCGATCCCGATCCATGGAACCCCGCT AACCCCACTCATCTGATGAGCAACAATGGCTCGTTGTCAGTCACGGCCAGCGGTAACAATGCGACCGCAAGCGCGATCAG TACCGAGGGCGAAGGGGTCTACATCTACAACAACGGGACACTGATCGTTGATGCATTTAGCGAGAGTGCGCAGGGCGGTG CATCCGCCTATGGTATTCATGTGCTCAACGGCAGTGCCACGATCAACTCCAGCGGCAGAATTTTGGCGACAGCCACCGGC GGAAGCCAACAGCAAGCCTATGAAGTGATGGCCGACGGTTCGGTAGTTAATATTGAACGCTATACACTCGCCTTGGGCAA TGAGACACCGTGGGCGGTCAGTAATGGCGGTTCGATCGTGCTGGGTAACGGTACGCAAGGGGCCGATCTGGTGCTGATGG CTGGGCAGGCCAGTGAAGGTTTCGCCTATGGTAAAGAGTACAGCTTGGACAATCTGGCTTACGATACCACCTCCGGCCAG CAGAGTACGGTGGGGGGTTCTATTGCGGGGTTGTACGGTATTACGCCTGATATCAAGGTGATTCACAGCGGTAGCAGCAG TAGTTCGTTGGGATCTGCTGCACTGGTGTATGCACCGGATGTCTCTCATGCCGGAGTCTCCGCATTGGCACAGCGTTCTT CCATGGAGCAGGCATCCAATATCATCTCCTCGCAACTGCATAGTCAGCTGGTAAGTAACGCCGGTTGTAACCAGAAGTTG GAGAGTGCCGATAGCTGCGTCTTTATCACACCTTATGCTGGTGAGTACCGTCGTGATCCAGTGACCTCCGGTTACAGCGG TCAGCGCTATGGGGTATTGCTCGGTCAGAACCAACATTTTGGCGATTTCCAGCTTGGCTGGCACGGCGGTTATGAGAGTG CCAGCACCGATTTTAATGGTACCTCTGTAGGGCGTAAGGAGGAGATTAATACGCTGATGCTGGGGGTTCAGGGCGGAATG AAGCTCTCTGAGAGTCTGTTTATTGCAGCGACCAGTACGTGGTTCAGCAGTGACACCGATTACAGTGACAGCAATACCTA CTACGGCGTGGGCAGCCAGAGCGGCAGCTATGATAGCAGTGGCCTCTACACCGATGTCTCCGTGGGTAATAGCTGGCAGT TGAATCGCAACTATGCCATGACACCGATGGTCGGGCTGACGCATATCTGGCAGCAACGCGATGGCTATACTGTCTCATCC AATAACAAAAACTATGATCTTATCGACACCCGCTATAGCAGCTACAGCGACCATGCAGTCGCTCTCCATGCTGGAGTACG TCTCGATGGTCGCTATCCACTGACCAACGAGACACTGCTTAAGCCGTTCTTTAATGTCGGATTCCAGCAAATGTTGTATG GCGATGAGATCACCATCGATCAGAGTATCCCTAATTCGCCGGTAGTTGGCGTAAGCACCAAGGATAAAACCACTCAAGGA ACCTTCGATCTGGGGATGGCACTGGTAAGCGATAACGGTGTGTCTGCCAGCCTACAGCTATCGGGCATGGTCAATAGTGA TCGTCAGGATTTCACCGGCTGGGCAAATCTGGGCTGGGCGTTCTAG
Upstream 100 bases:
>100_bases AAGATATTTTCGCCAAAGTCGGCTTTATCCTTAATTTCTAAGCGTCCACATCCTTTTACTAACGATAAAAAATATTGGGC TAATATTTAGGGAATGACCT
Downstream 100 bases:
>100_bases AGGGGCAGTTGCGTTAAGATGCTGTCGTATAACATGCAGTTCAGCATCTTAGGCCGCTGACAGCATTCCTACCGCTGTAC TCCGAATGCAGCGGCGGGAG
Product: putative autotransporter protein
Products: NA
Alternate protein names: Outer Membrane Autotransporter
Number of amino acids: Translated: 761; Mature: 761
Protein sequence:
>761_residues MNNHKIWRLSAVAVALLISGNSYADQTLHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNAGALSLRVEPT QGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATSNSLHGSAEVYGIQAGLAFSD AAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGGASAYGIHVLNGSATINSSGRILATATG GSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQ QSTVGGSIAGLYGITPDIKVIHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYTVSS NNKNYDLIDTRYSSYSDHAVALHAGVRLDGRYPLTNETLLKPFFNVGFQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF
Sequences:
>Translated_761_residues MNNHKIWRLSAVAVALLISGNSYADQTLHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNAGALSLRVEPT QGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATSNSLHGSAEVYGIQAGLAFSD AAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGGASAYGIHVLNGSATINSSGRILATATG GSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQ QSTVGGSIAGLYGITPDIKVIHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYTVSS NNKNYDLIDTRYSSYSDHAVALHAGVRLDGRYPLTNETLLKPFFNVGFQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF >Mature_761_residues MNNHKIWRLSAVAVALLISGNSYADQTLHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNAGALSLRVEPT QGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATSNSLHGSAEVYGIQAGLAFSD AAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGGASAYGIHVLNGSATINSSGRILATATG GSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQ QSTVGGSIAGLYGITPDIKVIHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYTVSS NNKNYDLIDTRYSSYSDHAVALHAGVRLDGRYPLTNETLLKPFFNVGFQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79554; Mature: 79554
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNHKIWRLSAVAVALLISGNSYADQTLHFAQQPHNTGDHTVIAAPEVNNFSLADLTANA CCCCEEEEEHHEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCC EGQAVDATNAGALSLRVEPTQGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGL CCCEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHCC QATDAYWSTLRNQGSIRATSNSLHGSAEVYGIQAGLAFSDAAGDHYGDHMMLSNEGVMQV HHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEECCEEECCCCCCCCCEEEECCCCEEEE SATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA ECCCCCCHHHCCEEECCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCC NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGGASAYGIH CCCEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCEEEEE VLNGSATINSSGRILATATGGSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIV EEECCEEECCCCCEEEEECCCCHHHHHHEEECCCEEEEEEEEEEECCCCCEEEECCCEEE LGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQQSTVGGSIAGLYGITPDIKV ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEE IHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL EECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNG HCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC TSVGRKEEINTLMLGVQGGMKLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSS CCCCCHHCCEEEEEEECCCCEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC GLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYTVSSNNKNYDLIDTRYSSYSDHAV CCEEEEECCCEEEECCCEECCCHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCEE ALHAGVRLDGRYPLTNETLLKPFFNVGFQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG EEEECEEECCCCCCCCCHHHHHHHHCCHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCC TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF CCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNNHKIWRLSAVAVALLISGNSYADQTLHFAQQPHNTGDHTVIAAPEVNNFSLADLTANA CCCCEEEEEHHEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCC EGQAVDATNAGALSLRVEPTQGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGL CCCEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHCC QATDAYWSTLRNQGSIRATSNSLHGSAEVYGIQAGLAFSDAAGDHYGDHMMLSNEGVMQV HHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEECCEEECCCCCCCCCEEEECCCCEEEE SATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA ECCCCCCHHHCCEEECCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCC NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGGASAYGIH CCCEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCEEEEE VLNGSATINSSGRILATATGGSQQQAYEVMADGSVVNIERYTLALGNETPWAVSNGGSIV EEECCEEECCCCCEEEEECCCCHHHHHHEEECCCEEEEEEEEEEECCCCCEEEECCCEEE LGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQQSTVGGSIAGLYGITPDIKV ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEE IHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL EECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNG HCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC TSVGRKEEINTLMLGVQGGMKLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSS CCCCCHHCCEEEEEEECCCCEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC GLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYTVSSNNKNYDLIDTRYSSYSDHAV CCEEEEECCCEEEECCCEECCCHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCCEE ALHAGVRLDGRYPLTNETLLKPFFNVGFQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG EEEECEEECCCCCCCCCHHHHHHHHCCHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCC TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF CCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA