Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is 22127446
Identifier: 22127446
GI number: 22127446
Start: 3955933
End: 3956469
Strand: Direct
Name: 22127446
Synonym: y3572
Alternate gene names: NA
Gene position: 3955933-3956469 (Clockwise)
Preceding gene: 22127445
Following gene: 22127447
Centisome position: 85.98
GC content: 46.93
Gene sequence:
>537_bases TTGAGTTACGGTGCCGAATTGGGTTACGAGCGTTTTACTGATGCCAAAGATGCGCCAGAAAAGCAGATGTACCATATTCG CCCTGAGATCAATCTGGGATTTGGCCGTAATTTCCTGCATCTCAATGCCGAGTTGGGCTGGATAGACAGAACTGACCGCG GCGCTTATATCGAAACCGAACCACTGTATCTCTACCGCGTTACCGATAACTTTAACATTGGCGCAAAAGCCTATTACCAC GCTGAAGATAACGACTATCGCTGGCGCGAGACGGCAATTCGCCCGTTGATACAGTATCGCTTCGCCAACAGTACCTATCT GGAACTGCGCTGGGAGATCGGTGGTATTCGTACTCATGACGGCAGTGGTTATAACTACAACAATTACGGTTTATATACCG AAATCCCCTTCAACCCGACGATATCCTTTATGGCCGACCTGCAATATAAGGATCAAAAACAGCATCGGGGTAATGAATGG TCGTGGGGCGATAAAGAAGATATTTTCGCCAAAGTCGGCTTTATCCTTAATTTCTAA
Upstream 100 bases:
>100_bases CCCACGTAATAATGCATTTGCCGGCTCCGATAAATCGCGCCGTGACTCTTTTATGGAAATTCAGTTGCTGCCGAAATATA TCAACTGAGTTAACGAGAAT
Downstream 100 bases:
>100_bases GCGTCCACATCCTTTTACTAACGATAAAAAATATTGGGCTAATATTTAGGGAATGACCTATGAATAACCATAAGATCTGG CGTTTATCCGCCGTTGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSYGAELGYERFTDAKDAPEKQMYHIRPEINLGFGRNFLHLNAELGWIDRTDRGAYIETEPLYLYRVTDNFNIGAKAYYH AEDNDYRWRETAIRPLIQYRFANSTYLELRWEIGGIRTHDGSGYNYNNYGLYTEIPFNPTISFMADLQYKDQKQHRGNEW SWGDKEDIFAKVGFILNF
Sequences:
>Translated_178_residues MSYGAELGYERFTDAKDAPEKQMYHIRPEINLGFGRNFLHLNAELGWIDRTDRGAYIETEPLYLYRVTDNFNIGAKAYYH AEDNDYRWRETAIRPLIQYRFANSTYLELRWEIGGIRTHDGSGYNYNNYGLYTEIPFNPTISFMADLQYKDQKQHRGNEW SWGDKEDIFAKVGFILNF >Mature_177_residues SYGAELGYERFTDAKDAPEKQMYHIRPEINLGFGRNFLHLNAELGWIDRTDRGAYIETEPLYLYRVTDNFNIGAKAYYHA EDNDYRWRETAIRPLIQYRFANSTYLELRWEIGGIRTHDGSGYNYNNYGLYTEIPFNPTISFMADLQYKDQKQHRGNEWS WGDKEDIFAKVGFILNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21129; Mature: 20997
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYGAELGYERFTDAKDAPEKQMYHIRPEINLGFGRNFLHLNAELGWIDRTDRGAYIETE CCCCCCCCHHHCCCCCCCCCCCEEEECCCEEECCCCCEEEEECEECEEEECCCCCEEECC PLYLYRVTDNFNIGAKAYYHAEDNDYRWRETAIRPLIQYRFANSTYLELRWEIGGIRTHD CEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHEEECCCEEEEEEEEECCEEECC GSGYNYNNYGLYTEIPFNPTISFMADLQYKDQKQHRGNEWSWGDKEDIFAKVGFILNF CCCCCCCCCCEEEECCCCCCEEEEEECCCCCHHHHCCCCCCCCCHHHHHEEEEEEECC >Mature Secondary Structure SYGAELGYERFTDAKDAPEKQMYHIRPEINLGFGRNFLHLNAELGWIDRTDRGAYIETE CCCCCCCHHHCCCCCCCCCCCEEEECCCEEECCCCCEEEEECEECEEEECCCCCEEECC PLYLYRVTDNFNIGAKAYYHAEDNDYRWRETAIRPLIQYRFANSTYLELRWEIGGIRTHD CEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHEEECCCEEEEEEEEECCEEECC GSGYNYNNYGLYTEIPFNPTISFMADLQYKDQKQHRGNEWSWGDKEDIFAKVGFILNF CCCCCCCCCCEEEECCCCCCEEEEEECCCCCHHHHCCCCCCCCCHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA