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The map label for this gene is ygiB [C]

Identifier: 22127391

GI number: 22127391

Start: 3900273

End: 3900959

Strand: Direct

Name: ygiB [C]

Synonym: y3517

Alternate gene names: 22127391

Gene position: 3900273-3900959 (Clockwise)

Preceding gene: 161484754

Following gene: 22127392

Centisome position: 84.77

GC content: 53.42

Gene sequence:

>687_bases
ATGATGAAACGGACTAAAAACATCAATCAAGAGACTTTCCGTAAATCCTGGCGTAGTTACCGCCTTGCGCCCGTAGCGTT
GGCTGTCAGTGCTGTGTTTATGCTGGCTGGCTGCGAAAAAACCGATGAAACCGTCTCTTTGTACCAAAATGCTGATGATT
GCTCACAGGCGAATCCGTCCCAGAGTGCAGAGTGCACCACCGCTTACAATACAGCCTTGCAAGAAGCGGTTAAAACTGCG
CCTAAATACGCGACCCGTGAAGATTGTGTGGCAGAATTTGGCGAGTCTCAGTGTACTCAAGCTCCTGCTCAGGCGGGTAT
GGTACCAACATCCTCGTCTGAAACCACGGCCGCAGCACCACAGCAAAGCGGCAGCATGTGGATGCCATTGATGGCTGGTT
ATATGATGGGCCGGATGATGGGCGGCGGAGCCAGCCAACCTTTGTTTACCTCAAAAGCACCGAACAGCCCGGCTAACGGC
AAATTTGTGGATGCGAGCGGCAAAAACTTTGGCGCTGCCACCACTGGCCGTACCATGACCGTGCCTAAAACCGCGCTGGC
ACCGAAGCCTGCGGTAACCAAAACTATCACTCGTGGTGGCTTTGGTGAGTCCGTGGCAAAACAGTCCTCTATGCAGCGTA
GCGCCGCAACATCATCCAAAACCACCACACGTAGCATGGGTGGCTAA

Upstream 100 bases:

>100_bases
CCACTCACACTCCCCTGTGCTTTAATTTCAAACATGTTTCCCCTATTCTTAGGGAACTTCCTGGGAAGGGCATTGAATGC
CCAGATTAAAGAGATAAATA

Downstream 100 bases:

>100_bases
GGCTGATTAATGAAACGTTTAGCGATTAGCGAACGCCCGGACTGGCGTGAAAAAGCCACTGAGTTTGGTTTTCGTTTTCA
CACCATGCATGGCGAGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MMKRTKNINQETFRKSWRSYRLAPVALAVSAVFMLAGCEKTDETVSLYQNADDCSQANPSQSAECTTAYNTALQEAVKTA
PKYATREDCVAEFGESQCTQAPAQAGMVPTSSSETTAAAPQQSGSMWMPLMAGYMMGRMMGGGASQPLFTSKAPNSPANG
KFVDASGKNFGAATTGRTMTVPKTALAPKPAVTKTITRGGFGESVAKQSSMQRSAATSSKTTTRSMGG

Sequences:

>Translated_228_residues
MMKRTKNINQETFRKSWRSYRLAPVALAVSAVFMLAGCEKTDETVSLYQNADDCSQANPSQSAECTTAYNTALQEAVKTA
PKYATREDCVAEFGESQCTQAPAQAGMVPTSSSETTAAAPQQSGSMWMPLMAGYMMGRMMGGGASQPLFTSKAPNSPANG
KFVDASGKNFGAATTGRTMTVPKTALAPKPAVTKTITRGGFGESVAKQSSMQRSAATSSKTTTRSMGG
>Mature_228_residues
MMKRTKNINQETFRKSWRSYRLAPVALAVSAVFMLAGCEKTDETVSLYQNADDCSQANPSQSAECTTAYNTALQEAVKTA
PKYATREDCVAEFGESQCTQAPAQAGMVPTSSSETTAAAPQQSGSMWMPLMAGYMMGRMMGGGASQPLFTSKAPNSPANG
KFVDASGKNFGAATTGRTMTVPKTALAPKPAVTKTITRGGFGESVAKQSSMQRSAATSSKTTTRSMGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0441 family [H]

Homologues:

Organism=Escherichia coli, GI145693179, Length=230, Percent_Identity=73.4782608695652, Blast_Score=338, Evalue=2e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009576 [H]

Pfam domain/function: PF06693 DUF1190 [H]

EC number: NA

Molecular weight: Translated: 23966; Mature: 23966

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRTKNINQETFRKSWRSYRLAPVALAVSAVFMLAGCEKTDETVSLYQNADDCSQANPS
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHCCCCC
QSAECTTAYNTALQEAVKTAPKYATREDCVAEFGESQCTQAPAQAGMVPTSSSETTAAAP
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCC
QQSGSMWMPLMAGYMMGRMMGGGASQPLFTSKAPNSPANGKFVDASGKNFGAATTGRTMT
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEE
VPKTALAPKPAVTKTITRGGFGESVAKQSSMQRSAATSSKTTTRSMGG
CCHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure
MMKRTKNINQETFRKSWRSYRLAPVALAVSAVFMLAGCEKTDETVSLYQNADDCSQANPS
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHCCCCC
QSAECTTAYNTALQEAVKTAPKYATREDCVAEFGESQCTQAPAQAGMVPTSSSETTAAAP
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCC
QQSGSMWMPLMAGYMMGRMMGGGASQPLFTSKAPNSPANGKFVDASGKNFGAATTGRTMT
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEE
VPKTALAPKPAVTKTITRGGFGESVAKQSSMQRSAATSSKTTTRSMGG
CCHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA