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The map label for this gene is ygiC [H]

Identifier: 22127392

GI number: 22127392

Start: 3900969

End: 3902129

Strand: Direct

Name: ygiC [H]

Synonym: y3518

Alternate gene names: 22127392

Gene position: 3900969-3902129 (Clockwise)

Preceding gene: 22127391

Following gene: 22127395

Centisome position: 84.79

GC content: 46.43

Gene sequence:

>1161_bases
ATGAAACGTTTAGCGATTAGCGAACGCCCGGACTGGCGTGAAAAAGCCACTGAGTTTGGTTTTCGTTTTCACACCATGCA
TGGCGAGCCATACTGGTGTGAGGATGCTTACTACGAATTCACACTGGCGCAAATTGAAGAGCTGGAAGAAACCACCGCAG
AATTACACCAAATGTGCCTGCAAGTGGTTGAAAAAGTCATTAACAGCGATCAGTTACTGACCAAGTGCCGTATCCCGAAG
CATTGTTGGGAGTTTGTCCGTCATTCATGGCGTAGCAATCAGCCTTCTCTCTATTCACGTCTTGATCTGGCCTATGACGG
TAAAAACCCGGCGAAGCTGCTGGAAAACAATGCAGATACCCCAACCTCATTGTATGAAGCGGCTTTTTTCCAATGGCTAT
GGTTGGAAGACCAGATTAGCGCTGGCAATTTGAGTACCGATTCTGATCAGTACAATAGCCTACAAGAAAAGCTGATTGAG
CGCTTTGTCGAGCTACGTGATAACCATGGTTTTAGCTTGCTGCATCTGGCCTGCTGTCAGGACAGTGAGGAAGATCGTGG
CACCGTACAATATTTGCAAGATTGCGCACTGGAAGCGGGTCTACCGACTGAATTCATGTTTATGGAAGAGATCGGTTTAG
GGGAAAAAGGGCAATTTACTGACCTAGATAATCAGGTGATCAGTAATTTATTTAAGCTCTATCCGTGGGAGTTTATGTTC
CGCGAAATATTCTCCACCAAACTGGAAGATGCTGGCGTACGCTGGCTGGAGCCAGCCTGGAAGAGCATTATCTCCAATAA
GGCCTTGTTACCGCTGTTGTGGGAAATGTTCCCAAATCACCCTAATTTACTGCCCGCTTACTTCGCGGAAGATGACCATC
CACCGCTGGATCATTACGTCATCAAACCGTTGTTCTCACGGGAAGGTGCCAATATTCAGATCGTAGAAAATGGCAAAGAA
GTCGCTAAGGTTGATGGGCCTTACGGCGAAGAAGGGATGATTATCCAGCAATTCCACCCATTACCAAAATTCGGTGATAG
CTATACCTTGATTGGTAGTTGGCTGGTCAATGATCAGCCGTGTGGTATTGGTTTACGTGAAGACCGTGAACTGATCACTC
AAGACCTGTCGCGGTTTTATCCACATATTATTTTGGGATAA

Upstream 100 bases:

>100_bases
TGGCTTTGGTGAGTCCGTGGCAAAACAGTCCTCTATGCAGCGTAGCGCCGCAACATCATCCAAAACCACCACACGTAGCA
TGGGTGGCTAAGGCTGATTA

Downstream 100 bases:

>100_bases
TTATAGTAAGGGAAGGCAATGCACCTTCCTTTACCATACCCAAAGTCATTGCCGTTGCAGCCAGGCAGCAAGTAAGTGAA
TCCCGATGAGCTTACTCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKRLAISERPDWREKATEFGFRFHTMHGEPYWCEDAYYEFTLAQIEELEETTAELHQMCLQVVEKVINSDQLLTKCRIPK
HCWEFVRHSWRSNQPSLYSRLDLAYDGKNPAKLLENNADTPTSLYEAAFFQWLWLEDQISAGNLSTDSDQYNSLQEKLIE
RFVELRDNHGFSLLHLACCQDSEEDRGTVQYLQDCALEAGLPTEFMFMEEIGLGEKGQFTDLDNQVISNLFKLYPWEFMF
REIFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPPLDHYVIKPLFSREGANIQIVENGKE
VAKVDGPYGEEGMIIQQFHPLPKFGDSYTLIGSWLVNDQPCGIGLREDRELITQDLSRFYPHIILG

Sequences:

>Translated_386_residues
MKRLAISERPDWREKATEFGFRFHTMHGEPYWCEDAYYEFTLAQIEELEETTAELHQMCLQVVEKVINSDQLLTKCRIPK
HCWEFVRHSWRSNQPSLYSRLDLAYDGKNPAKLLENNADTPTSLYEAAFFQWLWLEDQISAGNLSTDSDQYNSLQEKLIE
RFVELRDNHGFSLLHLACCQDSEEDRGTVQYLQDCALEAGLPTEFMFMEEIGLGEKGQFTDLDNQVISNLFKLYPWEFMF
REIFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPPLDHYVIKPLFSREGANIQIVENGKE
VAKVDGPYGEEGMIIQQFHPLPKFGDSYTLIGSWLVNDQPCGIGLREDRELITQDLSRFYPHIILG
>Mature_386_residues
MKRLAISERPDWREKATEFGFRFHTMHGEPYWCEDAYYEFTLAQIEELEETTAELHQMCLQVVEKVINSDQLLTKCRIPK
HCWEFVRHSWRSNQPSLYSRLDLAYDGKNPAKLLENNADTPTSLYEAAFFQWLWLEDQISAGNLSTDSDQYNSLQEKLIE
RFVELRDNHGFSLLHLACCQDSEEDRGTVQYLQDCALEAGLPTEFMFMEEIGLGEKGQFTDLDNQVISNLFKLYPWEFMF
REIFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPPLDHYVIKPLFSREGANIQIVENGKE
VAKVDGPYGEEGMIIQQFHPLPKFGDSYTLIGSWLVNDQPCGIGLREDRELITQDLSRFYPHIILG

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=385, Percent_Identity=78.7012987012987, Blast_Score=662, Evalue=0.0,
Organism=Escherichia coli, GI1790629, Length=391, Percent_Identity=51.6624040920716, Blast_Score=406, Evalue=1e-115,
Organism=Escherichia coli, GI1789361, Length=375, Percent_Identity=28.8, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 44947; Mature: 44947

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLAISERPDWREKATEFGFRFHTMHGEPYWCEDAYYEFTLAQIEELEETTAELHQMCL
CCCCCCCCCCCHHHHHHHHCCEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QVVEKVINSDQLLTKCRIPKHCWEFVRHSWRSNQPSLYSRLDLAYDGKNPAKLLENNADT
HHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHEECCCCHHHHHCCCCCC
PTSLYEAAFFQWLWLEDQISAGNLSTDSDQYNSLQEKLIERFVELRDNHGFSLLHLACCQ
HHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCC
DSEEDRGTVQYLQDCALEAGLPTEFMFMEEIGLGEKGQFTDLDNQVISNLFKLYPWEFMF
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
REIFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPPLDHYV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHH
IKPLFSREGANIQIVENGKEVAKVDGPYGEEGMIIQQFHPLPKFGDSYTLIGSWLVNDQP
HHHHHCCCCCEEEEEECCCHHEECCCCCCCCCEEHHCCCCCCCCCCCEEEEEEEEECCCC
CGIGLREDRELITQDLSRFYPHIILG
CCCCCHHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MKRLAISERPDWREKATEFGFRFHTMHGEPYWCEDAYYEFTLAQIEELEETTAELHQMCL
CCCCCCCCCCCHHHHHHHHCCEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QVVEKVINSDQLLTKCRIPKHCWEFVRHSWRSNQPSLYSRLDLAYDGKNPAKLLENNADT
HHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHEECCCCHHHHHCCCCCC
PTSLYEAAFFQWLWLEDQISAGNLSTDSDQYNSLQEKLIERFVELRDNHGFSLLHLACCQ
HHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCC
DSEEDRGTVQYLQDCALEAGLPTEFMFMEEIGLGEKGQFTDLDNQVISNLFKLYPWEFMF
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
REIFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPPLDHYV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHH
IKPLFSREGANIQIVENGKEVAKVDGPYGEEGMIIQQFHPLPKFGDSYTLIGSWLVNDQP
HHHHHCCCCCEEEEEECCCHHEECCCCCCCCCEEHHCCCCCCCCCCCEEEEEEEEECCCC
CGIGLREDRELITQDLSRFYPHIILG
CCCCCHHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]