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The map label for this gene is nrdD [C]

Identifier: 21910387

GI number: 21910387

Start: 907392

End: 907730

Strand: Reverse

Name: nrdD [C]

Synonym: SpyM3_0851

Alternate gene names: 21910387

Gene position: 907730-907392 (Counterclockwise)

Preceding gene: 21910388

Following gene: 21910385

Centisome position: 47.76

GC content: 35.99

Gene sequence:

>339_bases
ATGCAAATTATTAAGCGTGATGGCCACGTTGCTGATTTTGATCCAGATAAAATTTATCAAGCAATTATTAAAGCAGCAAG
GACGGTCTATGTTATTGATGACACGTGGCGACAAAACTTAACACATGTCACTAAAAAAGTAGTTATTGATTTAGAAGAAG
CACATGTAGAACGTCCTACTATCAATATGGTCCAATCCCTTGTGGAGAATCGTTTGATGGATGCTGGATATATTACCATT
GCAGAACATTACATTTCTTATCGTCTTCAGCGAGATTTAGAGCGTAATGGCTATGGTGATAAGATTGTGGTTCACTTGCG
TTTTGAACAAATAAAATAA

Upstream 100 bases:

>100_bases
AGAAAGTAGTTTTTTGGGTATGAGTGCTATGACTTGACAAATGCTAATAACATTTGCATAATGTAATTAGAGATGAAAAC
TTATGAAAAGAGATGATCTT

Downstream 100 bases:

>100_bases
AAACGCTTCCAATGGCATTTTAGTGTCTTTGAGGGGATAAGGTTTAAATACCTAACAGATAAAAATCTGTTAGGTATTTT
TTTTGCTACTATTAGGTGTA

Product: putative anaerobic ribonucleotide reductase

Products: dUTP; H2O; Oxidized thioredoxin [C]

Alternate protein names: ATP Cone Domain-Containing Protein; Ribonucleotide Reductase; Oxygen-Sensitive Ribonucleoside-Triphosphate Reductase

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MQIIKRDGHVADFDPDKIYQAIIKAARTVYVIDDTWRQNLTHVTKKVVIDLEEAHVERPTINMVQSLVENRLMDAGYITI
AEHYISYRLQRDLERNGYGDKIVVHLRFEQIK

Sequences:

>Translated_112_residues
MQIIKRDGHVADFDPDKIYQAIIKAARTVYVIDDTWRQNLTHVTKKVVIDLEEAHVERPTINMVQSLVENRLMDAGYITI
AEHYISYRLQRDLERNGYGDKIVVHLRFEQIK
>Mature_112_residues
MQIIKRDGHVADFDPDKIYQAIIKAARTVYVIDDTWRQNLTHVTKKVVIDLEEAHVERPTINMVQSLVENRLMDAGYITI
AEHYISYRLQRDLERNGYGDKIVVHLRFEQIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.17.4.2 [C]

Molecular weight: Translated: 13194; Mature: 13194

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIKRDGHVADFDPDKIYQAIIKAARTVYVIDDTWRQNLTHVTKKVVIDLEEAHVERPT
CCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCH
INMVQSLVENRLMDAGYITIAEHYISYRLQRDLERNGYGDKIVVHLRFEQIK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MQIIKRDGHVADFDPDKIYQAIIKAARTVYVIDDTWRQNLTHVTKKVVIDLEEAHVERPT
CCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCH
INMVQSLVENRLMDAGYITIAEHYISYRLQRDLERNGYGDKIVVHLRFEQIK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Ca2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced thioredoxin; UTP [C]

Specific reaction: Reduced thioredoxin + UTP --> dUTP + H2O + Oxidized thioredoxin [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA