Click here to switch to the map view.

The map label for this gene is pdxK

Identifier: 21910385

GI number: 21910385

Start: 904697

End: 905563

Strand: Reverse

Name: pdxK

Synonym: SpyM3_0849

Alternate gene names: NA

Gene position: 905563-904697 (Counterclockwise)

Preceding gene: 21910387

Following gene: 21910384

Centisome position: 47.65

GC content: 33.91

Gene sequence:

>867_bases
ATGAAACGGATTATTGTGGCAAATGATCTGGTTGGTGTTGGTAAGGTAGCTTTGTCTGCTAGTATTCCTTTAATGGCTTC
TTGTTTGTTAGAGCAAGTTTTATTACCAACTTGCCTTTTATCAAGCCATACTGGCGGAGGACAGAACCCTGTGAAGCATA
CTACATCAAGTATATTAGACGTTTTTTTAACAGATTGGGACAACAAAAGAATTAAGTTTGACGGCATCTTTATAGGTTAT
TTTACGACAACAAGAGATGGGCAAAAGCTGCTAGAATGGCTTTCAAGAAAGCAACTTCCCTTAATTTTAGATCCAATTAT
GGCAGATAATGGAAAACTTTATCAAGGCTTCAGTCAAAAACATATAGAGATTATGATAAAACTTACTCAAAAAGCTGAGC
TTGTTTTACCTAATATTAGTGAGGCTTGTCTATTAACACAAACAGCTTATTTAGCAAAAAATTATGATGAAGAAGATATT
AGACAGGTGGCTAGAAAATTAGCTAAGCTTGGACCTAAACAGGTTGTCATTAGCGGAATCTCTTTTGAGGAGGGCAGCAT
TGGTTTTGCTTACTATCAGTCAGATTCAGATCAATTAACATTCCATTTTGGGAAGCAATTCCCTTACCATTTCTATGGTA
CAGGAGATATAGCATCAGCTATTATAACAGCAGGATTCTATTATCAGCTACCACTAACACAAATTCTAGATCTTGTTGTT
TCATTTCTTGAAAAAGTATTGCAAAATACCCTTACATTAAAAAGAGATTTAATCTTAGGTGTTGCTTATGAATCTCATTT
AAATTACTTAACTAAATCGTTTAAAAAGTTGTTGGAGGAAAAAAATGTCATCTCAAAAATTAGCTAA

Upstream 100 bases:

>100_bases
TTTGTTGTCATAAATTGTCCCCATACAGTTAAGTGTTATAACTATTGTATCTTATGCCTCTTTTTCTTACAATAGTTATT
ATAGAAAAGAGGTAATAGCT

Downstream 100 bases:

>100_bases
TTATATTGAATTGAGTATGTATGCCGCTTTAATTTTTATTTCAGTACAAGTGTTGCGTGTCCCTGTCGGTATGCAGTTTA
TTCATCTTGGCAATGCATTA

Product: pyridoxamine kinase

Products: NA

Alternate protein names: Pyridoxamine Kinase; Pyridoxine Kinase; Pyridoxal/Pyridoxine/Pyridoxamine Kinase; Pyridoxine Kinase Family Protein; Phosphomethylpyrimidine Kinase; Pyridoxal Kinase-Like Protein; Pyridoxamine Kinase PdxY; Pyridoxal Kinase Related Protein; Pyridoxal/Pyridoxine/Pyridoxamine Kinase-Like Protein

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKRIIVANDLVGVGKVALSASIPLMASCLLEQVLLPTCLLSSHTGGGQNPVKHTTSSILDVFLTDWDNKRIKFDGIFIGY
FTTTRDGQKLLEWLSRKQLPLILDPIMADNGKLYQGFSQKHIEIMIKLTQKAELVLPNISEACLLTQTAYLAKNYDEEDI
RQVARKLAKLGPKQVVISGISFEEGSIGFAYYQSDSDQLTFHFGKQFPYHFYGTGDIASAIITAGFYYQLPLTQILDLVV
SFLEKVLQNTLTLKRDLILGVAYESHLNYLTKSFKKLLEEKNVISKIS

Sequences:

>Translated_288_residues
MKRIIVANDLVGVGKVALSASIPLMASCLLEQVLLPTCLLSSHTGGGQNPVKHTTSSILDVFLTDWDNKRIKFDGIFIGY
FTTTRDGQKLLEWLSRKQLPLILDPIMADNGKLYQGFSQKHIEIMIKLTQKAELVLPNISEACLLTQTAYLAKNYDEEDI
RQVARKLAKLGPKQVVISGISFEEGSIGFAYYQSDSDQLTFHFGKQFPYHFYGTGDIASAIITAGFYYQLPLTQILDLVV
SFLEKVLQNTLTLKRDLILGVAYESHLNYLTKSFKKLLEEKNVISKIS
>Mature_288_residues
MKRIIVANDLVGVGKVALSASIPLMASCLLEQVLLPTCLLSSHTGGGQNPVKHTTSSILDVFLTDWDNKRIKFDGIFIGY
FTTTRDGQKLLEWLSRKQLPLILDPIMADNGKLYQGFSQKHIEIMIKLTQKAELVLPNISEACLLTQTAYLAKNYDEEDI
RQVARKLAKLGPKQVVISGISFEEGSIGFAYYQSDSDQLTFHFGKQFPYHFYGTGDIASAIITAGFYYQLPLTQILDLVV
SFLEKVLQNTLTLKRDLILGVAYESHLNYLTKSFKKLLEEKNVISKIS

Specific function: Unknown

COG id: COG2240

COG function: function code H; Pyridoxal/pyridoxine/pyridoxamine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32275; Mature: 32275

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIIVANDLVGVGKVALSASIPLMASCLLEQVLLPTCLLSSHTGGGQNPVKHTTSSILD
CCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
VFLTDWDNKRIKFDGIFIGYFTTTRDGQKLLEWLSRKQLPLILDPIMADNGKLYQGFSQK
HHHCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCCCEECCCCCC
HIEIMIKLTQKAELVLPNISEACLLTQTAYLAKNYDEEDIRQVARKLAKLGPKQVVISGI
EEEEEEEECCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECC
SFEEGSIGFAYYQSDSDQLTFHFGKQFPYHFYGTGDIASAIITAGFYYQLPLTQILDLVV
CCCCCCEEEEEEECCCCEEEEEECCCCCEEEECCHHHHHHHHHHCHHEECCHHHHHHHHH
SFLEKVLQNTLTLKRDLILGVAYESHLNYLTKSFKKLLEEKNVISKIS
HHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRIIVANDLVGVGKVALSASIPLMASCLLEQVLLPTCLLSSHTGGGQNPVKHTTSSILD
CCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
VFLTDWDNKRIKFDGIFIGYFTTTRDGQKLLEWLSRKQLPLILDPIMADNGKLYQGFSQK
HHHCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCCCEECCCCCC
HIEIMIKLTQKAELVLPNISEACLLTQTAYLAKNYDEEDIRQVARKLAKLGPKQVVISGI
EEEEEEEECCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECC
SFEEGSIGFAYYQSDSDQLTFHFGKQFPYHFYGTGDIASAIITAGFYYQLPLTQILDLVV
CCCCCCEEEEEEECCCCEEEEEECCCCCEEEECCHHHHHHHHHHCHHEECCHHHHHHHHH
SFLEKVLQNTLTLKRDLILGVAYESHLNYLTKSFKKLLEEKNVISKIS
HHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA