Definition | Streptococcus pyogenes MGAS315 chromosome, complete genome. |
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Accession | NC_004070 |
Length | 1,900,521 |
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The map label for this gene is ffh [H]
Identifier: 21910377
GI number: 21910377
Start: 894904
End: 896466
Strand: Reverse
Name: ffh [H]
Synonym: SpyM3_0841
Alternate gene names: 21910377
Gene position: 896466-894904 (Counterclockwise)
Preceding gene: 21910378
Following gene: 21910375
Centisome position: 47.17
GC content: 40.5
Gene sequence:
>1563_bases ATGGCTTTTGAAAGCTTAACCCAACGTTTGCAAGATGTGTTTAAACACATTCGCGGTAAAAAGAAATTATCAGAATCAGA TGTTCAAGAAGTGACAAAAGAGATTCGTCTAGCTCTTTTAGAAGCCGATGTCGCTTTACCAGTTGTTAAAACCTTTATTA AGCGCGTACGTGAGCGCGCTATTGGCCATGAGATTATTGATACTCTTGATCCAACACAACAAATTCTTAAGATTGTTAAT GAAGAATTAACGAGTATTTTAGGCTCAGAAACCGCGGAGATTGATAAATCTCCAAAAATTCCAACTATTATCATGATGGT CGGTTTGCAAGGGACTGGTAAAACCACTTTTGCAGGAAAACTCGCTAATAAATTAATTAAAGAAGAAAACGCGCGACCAC TGATGATTGCTGCCGATATTTACCGTCCAGCGGCCATTGATCAGTTAAAAACACTGGGGCAACAAATCAATGTACCTGTT TTTGATATGGGGACAGACCACTCAGCAGTCGATATTGTCAGAAAAGGTTTGGAACAAGCTCGTGAAAACCGCAATGACTA TGTCTTGATTGATACTGCGGGTCGCTTGCAAATTGATGAAAAACTGATGGAAGAGCTGCGCGATGTCAAGGCTTTAGCAC AACCAAATGAAATTCTTTTGGTTGTAGATAGCATGATTGGTCAAGAAGCTGCCAATGTAGCCTACGAGTTTAATCATCAG TTGAGCATCACAGGGGTTGTGTTAACAAAGATTGATGGTGATACCCGTGGAGGTGCAGCACTATCTGTCCGTGAAATCAC TGGAAAACCAATTAAATTTACAGGTATTGGTGAAAAAATCACAGATATTGAAACATTTCACCCAGACCGCATGTCCAGTC GGATTTTGGGAATGGGTGACTTACTCACTCTTATTGAAAAAGCTAGCCAGGAATATGATGAGAAAAAATCCTTAGAGTTA GCTGAAAAAATGCGTGAGAACACCTTTGATTTCAATGATTTCATTGAACAGTTAGATCAAGTGCAAAATATGGGGCCTAT GGAAGACCTCTTGAAAATGATTCCAGGAATGGCTGGTAACCCAGCTTTGGCCAATATCAAAGTTGACGAAAACCAAATTG CTCGCAAACGTGCTATTGTCTCTTCGATGACCCCCGCTGAACGTGAAAACCCTGACTTACTAAACCCGAGTCGTCGCCGT CGTATTGCAGCTGGTTCCGGGAACAGCTTTGTGGAAGTTAATAAATTTATCAAAGACTTTAACCAAGCCAAAAGCATGAT GCAAGGGGTTATGTCGGGCGATATGTCTAAGATGATGAAAGATATGGGCATTAATCCCAATAATCTTCCTAAAAACATGC CTGCTGGTATGCCAGATATGTCTTCCTTAGAAGGGATGATGGGACAAGGTGGTATGCCTGATTTATCTGGCCTTGGTGGT GATATGGATATGAGTCAACTATTTGGTAAAGGGTTCAAGGGGAAAATTGGACAATTTGCCATGAAACAGGCCATGAAACG TCAAGCTAACAAACTAAAAAAAGCAAAGAAAAAACGAAAATAA
Upstream 100 bases:
>100_bases TTGACGACATGATTGCTCACTACCCTCATGATGAGTATTTGCAAGAAAAAATTTCCATTCTAACCAGTATTGACAATAGA GAGTAAGAGGAGTTTTGACT
Downstream 100 bases:
>100_bases AAGAGACGGAAATTTTCGTCTCTTTTTGATGTGAAATTCATTTATCTTGTATACAAGATTATTAAAATTATGGAAGACCG CGTTACATGCATGATGAGTT
Product: putative signal recognition particle -inhibited division protein
Products: NA
Alternate protein names: Fifty-four homolog [H]
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MAFESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVN EELTSILGSETAEIDKSPKIPTIIMMVGLQGTGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPV FDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQ LSITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLEL AEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPDLLNPSRRR RIAAGSGNSFVEVNKFIKDFNQAKSMMQGVMSGDMSKMMKDMGINPNNLPKNMPAGMPDMSSLEGMMGQGGMPDLSGLGG DMDMSQLFGKGFKGKIGQFAMKQAMKRQANKLKKAKKKRK
Sequences:
>Translated_520_residues MAFESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVN EELTSILGSETAEIDKSPKIPTIIMMVGLQGTGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPV FDMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQ LSITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLEL AEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPDLLNPSRRR RIAAGSGNSFVEVNKFIKDFNQAKSMMQGVMSGDMSKMMKDMGINPNNLPKNMPAGMPDMSSLEGMMGQGGMPDLSGLGG DMDMSQLFGKGFKGKIGQFAMKQAMKRQANKLKKAKKKRK >Mature_519_residues AFESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERAIGHEIIDTLDPTQQILKIVNE ELTSILGSETAEIDKSPKIPTIIMMVGLQGTGKTTFAGKLANKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVF DMGTDHSAVDIVRKGLEQARENRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQL SITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELA EKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGNPALANIKVDENQIARKRAIVSSMTPAERENPDLLNPSRRRR IAAGSGNSFVEVNKFIKDFNQAKSMMQGVMSGDMSKMMKDMGINPNNLPKNMPAGMPDMSSLEGMMGQGGMPDLSGLGGD MDMSQLFGKGFKGKIGQFAMKQAMKRQANKLKKAKKKRK
Specific function: Necessary for efficient export of extracytoplasmic proteins. Binds to the signal sequence when it emerges from the ribosomes [H]
COG id: COG0541
COG function: function code U; Signal recognition particle GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding SRP family [H]
Homologues:
Organism=Homo sapiens, GI4507215, Length=452, Percent_Identity=30.7522123893805, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI226371618, Length=389, Percent_Identity=31.8766066838046, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI295424842, Length=308, Percent_Identity=28.5714285714286, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI23308697, Length=308, Percent_Identity=28.5714285714286, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI89061728, Length=146, Percent_Identity=36.3013698630137, Blast_Score=101, Evalue=2e-21, Organism=Escherichia coli, GI1788963, Length=420, Percent_Identity=48.0952380952381, Blast_Score=411, Evalue=1e-116, Organism=Escherichia coli, GI1789874, Length=269, Percent_Identity=33.457249070632, Blast_Score=148, Evalue=9e-37, Organism=Caenorhabditis elegans, GI17539958, Length=494, Percent_Identity=27.3279352226721, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI193206261, Length=299, Percent_Identity=29.4314381270903, Blast_Score=113, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6325345, Length=467, Percent_Identity=30.406852248394, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6320498, Length=315, Percent_Identity=26.031746031746, Blast_Score=100, Evalue=5e-22, Organism=Drosophila melanogaster, GI17647949, Length=497, Percent_Identity=30.1810865191147, Blast_Score=196, Evalue=5e-50, Organism=Drosophila melanogaster, GI24641198, Length=311, Percent_Identity=30.5466237942122, Blast_Score=122, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR000897 - InterPro: IPR013822 - InterPro: IPR004780 - InterPro: IPR004125 [H]
Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N; PF02978 SRP_SPB [H]
EC number: NA
Molecular weight: Translated: 57651; Mature: 57520
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERA CCHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGHEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGTGKTTFAGK HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEEECCCCCCCHHHHH LANKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQA HHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHH RENRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQ HHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHEECCE LSITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGD EEEEEEEEEEECCCCCCCCEEEEHCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHCCHHH LLTLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC PALANIKVDENQIARKRAIVSSMTPAERENPDLLNPSRRRRIAAGSGNSFVEVNKFIKDF CCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCEEECCCCCCHHHHHHHHHHH NQAKSMMQGVMSGDMSKMMKDMGINPNNLPKNMPAGMPDMSSLEGMMGQGGMPDLSGLGG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC DMDMSQLFGKGFKGKIGQFAMKQAMKRQANKLKKAKKKRK CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFESLTQRLQDVFKHIRGKKKLSESDVQEVTKEIRLALLEADVALPVVKTFIKRVRERA CHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGHEIIDTLDPTQQILKIVNEELTSILGSETAEIDKSPKIPTIIMMVGLQGTGKTTFAGK HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEEECCCCCCCHHHHH LANKLIKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTDHSAVDIVRKGLEQA HHHHHHHHCCCCCEEEEHHHHCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHH RENRNDYVLIDTAGRLQIDEKLMEELRDVKALAQPNEILLVVDSMIGQEAANVAYEFNHQ HHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHEECCE LSITGVVLTKIDGDTRGGAALSVREITGKPIKFTGIGEKITDIETFHPDRMSSRILGMGD EEEEEEEEEEECCCCCCCCEEEEHCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHCCHHH LLTLIEKASQEYDEKKSLELAEKMRENTFDFNDFIEQLDQVQNMGPMEDLLKMIPGMAGN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC PALANIKVDENQIARKRAIVSSMTPAERENPDLLNPSRRRRIAAGSGNSFVEVNKFIKDF CCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCEEECCCCCCHHHHHHHHHHH NQAKSMMQGVMSGDMSKMMKDMGINPNNLPKNMPAGMPDMSSLEGMMGQGGMPDLSGLGG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC DMDMSQLFGKGFKGKIGQFAMKQAMKRQANKLKKAKKKRK CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12397186; 8763945 [H]