Click here to switch to the map view.

The map label for this gene is 21910311

Identifier: 21910311

GI number: 21910311

Start: 829851

End: 830465

Strand: Direct

Name: 21910311

Synonym: SpyM3_0775

Alternate gene names: NA

Gene position: 829851-830465 (Clockwise)

Preceding gene: 21910310

Following gene: 21910312

Centisome position: 43.66

GC content: 31.87

Gene sequence:

>615_bases
ATGTTAGAAATTGTTTCAGAAGAGCTACGTCACTATCAAGAACAAAAATTGATTGAGTACCGTAACAAAAATCAGTTAGC
CCCAAAAGGAGGCATTGTATTTGCAGGTGATTCTCTCATTGAATTTTTTCCTTTAAAAAAAGCTTTTGGTTCATGTTTGC
CTATTATTAATCGAGGTATTGCTGGGATAGATAGTCAGTGGTTATTGCGCCATTTTTCTGTCCAAATTACTGATTTAGAG
CCTAAACATATTTTTTTATTAATTGGTTGTAATGATATCGGGCTTGGATATGATAAATGTCATATTGTCAAGACTATTGT
AGAGCTTATTAGCCAGATTCGTAGTCATTGTGTCTATAGTCAGATTTATCTCTTATCTTTATTACCAGTTTCCAACAATC
CCCGATATCAGAAGACTGTCAAAATAAGAACAAATGCTATGATTGATGCTATTAATAAAGATTTAGCAATGATTCCAACT
GTAGAATTTATTAATCTTAATACTTGTCTTAAAGACGAAAAAGGTGGTTTATCAGATGAGAATACTCTAGATGGTTTACA
TCTTAATTTTCCAGCTTATGCTAAACTAGCTGAAATTATTCAAGCTTATATCTAG

Upstream 100 bases:

>100_bases
TTACTGCTAGAGTTTCATCTGAACCAAAGTGAAACGCTTTTGATGAAGTCAAGTAGGCTTTTTGTTATACTAACAATAAA
GATAAGCTAAGGAGGCTGAG

Downstream 100 bases:

>100_bases
CAAATAAATGTACTAATAGCGATGAGGCAAGAAGTCAGATAGCAGATGGTTCATCAATCAATTAAGGAAAAAGTTATCAA
GATACCATTAAAAATAGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Platelet Activating Factor; SGNH Hydrolase; GDSL-Like Lipase/Acylhydrolase Family Protein; Lipase/Acylhydrolase Family Protein; Lipase/Acylhydrolase GDSL Family; Lysophospholipase L1 Related Esterase; Beta-Lactamase/Acylhydrolase; Lipase/Acylhydrolase; Esterase

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLEIVSEELRHYQEQKLIEYRNKNQLAPKGGIVFAGDSLIEFFPLKKAFGSCLPIINRGIAGIDSQWLLRHFSVQITDLE
PKHIFLLIGCNDIGLGYDKCHIVKTIVELISQIRSHCVYSQIYLLSLLPVSNNPRYQKTVKIRTNAMIDAINKDLAMIPT
VEFINLNTCLKDEKGGLSDENTLDGLHLNFPAYAKLAEIIQAYI

Sequences:

>Translated_204_residues
MLEIVSEELRHYQEQKLIEYRNKNQLAPKGGIVFAGDSLIEFFPLKKAFGSCLPIINRGIAGIDSQWLLRHFSVQITDLE
PKHIFLLIGCNDIGLGYDKCHIVKTIVELISQIRSHCVYSQIYLLSLLPVSNNPRYQKTVKIRTNAMIDAINKDLAMIPT
VEFINLNTCLKDEKGGLSDENTLDGLHLNFPAYAKLAEIIQAYI
>Mature_204_residues
MLEIVSEELRHYQEQKLIEYRNKNQLAPKGGIVFAGDSLIEFFPLKKAFGSCLPIINRGIAGIDSQWLLRHFSVQITDLE
PKHIFLLIGCNDIGLGYDKCHIVKTIVELISQIRSHCVYSQIYLLSLLPVSNNPRYQKTVKIRTNAMIDAINKDLAMIPT
VEFINLNTCLKDEKGGLSDENTLDGLHLNFPAYAKLAEIIQAYI

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23102; Mature: 23102

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEIVSEELRHYQEQKLIEYRNKNQLAPKGGIVFAGDSLIEFFPLKKAFGSCLPIINRGI
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCC
AGIDSQWLLRHFSVQITDLEPKHIFLLIGCNDIGLGYDKCHIVKTIVELISQIRSHCVYS
CCCCHHHHHHHHEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QIYLLSLLPVSNNPRYQKTVKIRTNAMIDAINKDLAMIPTVEFINLNTCLKDEKGGLSDE
HHHHHHEECCCCCCCEEEEEEEEHHHHHHHHCCCEEECCCEEEEECHHHHCCCCCCCCCC
NTLDGLHLNFPAYAKLAEIIQAYI
CCCCCEEECCCHHHHHHHHHHHHC
>Mature Secondary Structure
MLEIVSEELRHYQEQKLIEYRNKNQLAPKGGIVFAGDSLIEFFPLKKAFGSCLPIINRGI
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCC
AGIDSQWLLRHFSVQITDLEPKHIFLLIGCNDIGLGYDKCHIVKTIVELISQIRSHCVYS
CCCCHHHHHHHHEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QIYLLSLLPVSNNPRYQKTVKIRTNAMIDAINKDLAMIPTVEFINLNTCLKDEKGGLSDE
HHHHHHEECCCCCCCEEEEEEEEHHHHHHHHCCCEEECCCEEEEECHHHHCCCCCCCCCC
NTLDGLHLNFPAYAKLAEIIQAYI
CCCCCEEECCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA