Definition | Streptococcus pyogenes MGAS315 chromosome, complete genome. |
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Accession | NC_004070 |
Length | 1,900,521 |
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The map label for this gene is clcA [H]
Identifier: 21910310
GI number: 21910310
Start: 828156
End: 829688
Strand: Direct
Name: clcA [H]
Synonym: SpyM3_0774
Alternate gene names: 21910310
Gene position: 828156-829688 (Clockwise)
Preceding gene: 21910309
Following gene: 21910311
Centisome position: 43.58
GC content: 36.73
Gene sequence:
>1533_bases ATGGAAAACCATAAAAATGAATTCACCTTTTCCAACAAATCAATTATTGCCTATGTTTGGCGTGGTGTTGTGGTTGGTAT TATTGCTGGTGTTATTGTTAGTTTATTCCGGTTGTTAATTGAAGTGACAGCTGACTGGGTGATTGAATGGTACCGATACG CTCATATCAATTCGCTGTTGCTACTTCCTATACTAAGTGTCAGTTTGTTAGCTGTTCTTTTTGTAGGTTTTTTAGTAAAG TCTGATTCTGATATAAAAGGATCAGGGATCCCCCATGTCGAAGGAGAACTAAAGGGGCTAATGTCCCCAGATTGGTGGAG TGTCCTTTGGAAAAAATTTTTAGGAGGAATCATGGCTATTTCTATGGGATTTATGCTCGGTCGTGAGGGTCCTTCGATTC AGTTAGGTGCTATGTCAGCCAAAGGATTAGCTAAGTTTTTAAAATCGAGTCGTTTGGAAAAGCGAGTGCTAATTGCCAGC GGAGCAGCAGCAGGGCTATCAGCAGCTTTTAATGCTCCAATAGCAGGCCTCTTGTTTGTTGTTGAAGAAATTTACCATCA TTTTTCGCGTTTAATTTGGATTACAGCGCTAGTGGCTAGTTTAGTGGCTAATTTTATTTCTCTGAATATTTTTGGATTGA AACCAGTCTTAGCAATGTCAGAGGCGATGCCTTTTTTAGGACTCAATCAATATTGGTTGTTGCTTTTACTTGGATTATTT CTAGGCTGCTTAGGCTATTTATATGAGATAGTTATCCTTAATTTTAATAAACTTTATGTTATTTTAGGGAGTTGGTTACA TCTGCCAGCTTATTTTTACGGTATTATTATGGTTTTTCTAATTTTACCGATTGGCTATTATTTACCACAGTTACTTGGAG GAGGGCATGGTTTAATACTTTCTTTATCCAATCAACAATTGCCTTTGATGACTATCTTCTTTTATTTTATTATTCGATTT ATTGTTAGTATGTTTAGTTATGGAAGTGGCTTACCTGGAGGTATTTTTTTACCTATTTTAACTTTAGGTGCTTTGGCAGG CCTATTATTTGGGCAAATAGCTTCTCAATTAGGTTTATTGAACCAATCTTTTCTTTCTCTTTTTTTGATATTAGGGATGG CAGGGTATTTTGCGGCAATTTCAAAAGCACCACTGACAGGCATGATTTTGGTAACTGAAATGGTAGGTGATTTGAAACCC TTAATGGCCATAGCTGTAGTTACTTTTGTCTCCTATTTAGTGATGGATTTGTTAAATGGACAGCCAATTTACGAAGCTAT GCTAGATAAGATGGCAATGAAGCATCCAACTAATCTTGTTGAACCAACATTAATTGAATTGACTGTTGGTGATAAGATTG CAGGGAAATATGTTAAAGAGTTAAAGCTTCCAGAAAATGTCTTAATTACAACCCAAATTCACCATCAAAAATCTCAAGTT GTGTCAGGTAACACGCGCCTTTTGTCAGGAGCAACTATCTTTTTGGTCGTTAATGAAGCTGATACAGGTTTTGTCCGTGA GGTATTGATGTAG
Upstream 100 bases:
>100_bases TTTTGGGTTACAGAAATCAGTTCTAAAAAAGAATCACTGGTAACTTAAGGTTGACTTTGATACAATGGTAACAGTGTATT TAAAAGAAAGAGAGGACAAC
Downstream 100 bases:
>100_bases GTATTAATTTATCACAATTCGGAAAGTTCGAGCTTGTCTTTTAGACTAAGTCTTCGAACATTTTACTGCTAGAGTTTCAT CTGAACCAAAGTGAAACGCT
Product: hypothetical protein
Products: Cl Ion [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MENHKNEFTFSNKSIIAYVWRGVVVGIIAGVIVSLFRLLIEVTADWVIEWYRYAHINSLLLLPILSVSLLAVLFVGFLVK SDSDIKGSGIPHVEGELKGLMSPDWWSVLWKKFLGGIMAISMGFMLGREGPSIQLGAMSAKGLAKFLKSSRLEKRVLIAS GAAAGLSAAFNAPIAGLLFVVEEIYHHFSRLIWITALVASLVANFISLNIFGLKPVLAMSEAMPFLGLNQYWLLLLLGLF LGCLGYLYEIVILNFNKLYVILGSWLHLPAYFYGIIMVFLILPIGYYLPQLLGGGHGLILSLSNQQLPLMTIFFYFIIRF IVSMFSYGSGLPGGIFLPILTLGALAGLLFGQIASQLGLLNQSFLSLFLILGMAGYFAAISKAPLTGMILVTEMVGDLKP LMAIAVVTFVSYLVMDLLNGQPIYEAMLDKMAMKHPTNLVEPTLIELTVGDKIAGKYVKELKLPENVLITTQIHHQKSQV VSGNTRLLSGATIFLVVNEADTGFVREVLM
Sequences:
>Translated_510_residues MENHKNEFTFSNKSIIAYVWRGVVVGIIAGVIVSLFRLLIEVTADWVIEWYRYAHINSLLLLPILSVSLLAVLFVGFLVK SDSDIKGSGIPHVEGELKGLMSPDWWSVLWKKFLGGIMAISMGFMLGREGPSIQLGAMSAKGLAKFLKSSRLEKRVLIAS GAAAGLSAAFNAPIAGLLFVVEEIYHHFSRLIWITALVASLVANFISLNIFGLKPVLAMSEAMPFLGLNQYWLLLLLGLF LGCLGYLYEIVILNFNKLYVILGSWLHLPAYFYGIIMVFLILPIGYYLPQLLGGGHGLILSLSNQQLPLMTIFFYFIIRF IVSMFSYGSGLPGGIFLPILTLGALAGLLFGQIASQLGLLNQSFLSLFLILGMAGYFAAISKAPLTGMILVTEMVGDLKP LMAIAVVTFVSYLVMDLLNGQPIYEAMLDKMAMKHPTNLVEPTLIELTVGDKIAGKYVKELKLPENVLITTQIHHQKSQV VSGNTRLLSGATIFLVVNEADTGFVREVLM >Mature_510_residues MENHKNEFTFSNKSIIAYVWRGVVVGIIAGVIVSLFRLLIEVTADWVIEWYRYAHINSLLLLPILSVSLLAVLFVGFLVK SDSDIKGSGIPHVEGELKGLMSPDWWSVLWKKFLGGIMAISMGFMLGREGPSIQLGAMSAKGLAKFLKSSRLEKRVLIAS GAAAGLSAAFNAPIAGLLFVVEEIYHHFSRLIWITALVASLVANFISLNIFGLKPVLAMSEAMPFLGLNQYWLLLLLGLF LGCLGYLYEIVILNFNKLYVILGSWLHLPAYFYGIIMVFLILPIGYYLPQLLGGGHGLILSLSNQQLPLMTIFFYFIIRF IVSMFSYGSGLPGGIFLPILTLGALAGLLFGQIASQLGLLNQSFLSLFLILGMAGYFAAISKAPLTGMILVTEMVGDLKP LMAIAVVTFVSYLVMDLLNGQPIYEAMLDKMAMKHPTNLVEPTLIELTVGDKIAGKYVKELKLPENVLITTQIHHQKSQV VSGNTRLLSGATIFLVVNEADTGFVREVLM
Specific function: Proton-coupled chloride transporter. Functions as antiport system and exchanges two chloride ions for 1 proton. Probably acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation, as part of the extreme
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcA subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557473, Length=428, Percent_Identity=26.4018691588785, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI189217923, Length=428, Percent_Identity=26.4018691588785, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI189217921, Length=428, Percent_Identity=26.4018691588785, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI153252026, Length=442, Percent_Identity=26.4705882352941, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1786350, Length=443, Percent_Identity=31.3769751693002, Blast_Score=145, Evalue=6e-36, Organism=Escherichia coli, GI87081943, Length=321, Percent_Identity=28.9719626168224, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17532615, Length=466, Percent_Identity=24.2489270386266, Blast_Score=84, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6322500, Length=487, Percent_Identity=26.2833675564682, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24665008, Length=404, Percent_Identity=25, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 55978; Mature: 55978
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENHKNEFTFSNKSIIAYVWRGVVVGIIAGVIVSLFRLLIEVTADWVIEWYRYAHINSLL CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPILSVSLLAVLFVGFLVKSDSDIKGSGIPHVEGELKGLMSPDWWSVLWKKFLGGIMAI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHH SMGFMLGREGPSIQLGAMSAKGLAKFLKSSRLEKRVLIASGAAAGLSAAFNAPIAGLLFV HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCHHHHHHH VEEIYHHFSRLIWITALVASLVANFISLNIFGLKPVLAMSEAMPFLGLNQYWLLLLLGLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHH LGCLGYLYEIVILNFNKLYVILGSWLHLPAYFYGIIMVFLILPIGYYLPQLLGGGHGLIL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE SLSNQQLPLMTIFFYFIIRFIVSMFSYGSGLPGGIFLPILTLGALAGLLFGQIASQLGLL EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NQSFLSLFLILGMAGYFAAISKAPLTGMILVTEMVGDLKPLMAIAVVTFVSYLVMDLLNG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QPIYEAMLDKMAMKHPTNLVEPTLIELTVGDKIAGKYVKELKLPENVLITTQIHHQKSQV CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHH VSGNTRLLSGATIFLVVNEADTGFVREVLM HCCCCEEEECEEEEEEEECCCCHHHHHHHC >Mature Secondary Structure MENHKNEFTFSNKSIIAYVWRGVVVGIIAGVIVSLFRLLIEVTADWVIEWYRYAHINSLL CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPILSVSLLAVLFVGFLVKSDSDIKGSGIPHVEGELKGLMSPDWWSVLWKKFLGGIMAI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHH SMGFMLGREGPSIQLGAMSAKGLAKFLKSSRLEKRVLIASGAAAGLSAAFNAPIAGLLFV HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCHHHHHHH VEEIYHHFSRLIWITALVASLVANFISLNIFGLKPVLAMSEAMPFLGLNQYWLLLLLGLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHH LGCLGYLYEIVILNFNKLYVILGSWLHLPAYFYGIIMVFLILPIGYYLPQLLGGGHGLIL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE SLSNQQLPLMTIFFYFIIRFIVSMFSYGSGLPGGIFLPILTLGALAGLLFGQIASQLGLL EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NQSFLSLFLILGMAGYFAAISKAPLTGMILVTEMVGDLKPLMAIAVVTFVSYLVMDLLNG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QPIYEAMLDKMAMKHPTNLVEPTLIELTVGDKIAGKYVKELKLPENVLITTQIHHQKSQV CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHH VSGNTRLLSGATIFLVVNEADTGFVREVLM HCCCCEEEECEEEEEEEECCCCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cl Ion [Periplasm] [C]
Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA