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The map label for this gene is 21909934

Identifier: 21909934

GI number: 21909934

Start: 438499

End: 438819

Strand: Reverse

Name: 21909934

Synonym: SpyM3_0398

Alternate gene names: NA

Gene position: 438819-438499 (Counterclockwise)

Preceding gene: 21909938

Following gene: 21909933

Centisome position: 23.09

GC content: 36.76

Gene sequence:

>321_bases
GTGTTACAATCTGTTTTAAAAGACACAAAAACGAAAGGACAACCTATGTCAACAGTTAAACGCTACGATGAAGAATTCAA
ACAATCTCTTGTCAACCTTTATCAAACTGGAAAAACTCAGTCTGAACTCTGTAAAGACTATGGGGTATCCGCTTCTGCGC
TTGCAAAATGGATCAAACAGTATTCTCAAGTCAAACTCGAAGATAATTCTGTACTTACTGCCAAGCAAATACAAGAGCTA
CAAAAACGTAATGCGCAGCTTGAAGAGGAGAACCTTATCCTAAAAAAAGCAAGTGCCATATTCATGCAAAACTTAAAGTA
A

Upstream 100 bases:

>100_bases
TATATTTCGATAACCTGACCGTTTTTGAAGTGAACTGCTACTTTTTTTATTTTTATAAATGACCACTGGATGTATACTAT
AAAAGTAGACAAAACTTTGT

Downstream 100 bases:

>100_bases
GACTCCTCGCTGTCTATCGGTTACGCTTTGAACACGCCACAACAACCTTGTGTCGTGTTTTACGTGTCAATCGCTCCACT
TACTATAAATTTCTAAAACA

Product: transposase TnpA (fragment)

Products: NA

Alternate protein names: Transposase Family Protein; Transposase IS3/IS; Transposase Subfamily; Transposase OrfA IS3 Family; Truncated Transposase

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MLQSVLKDTKTKGQPMSTVKRYDEEFKQSLVNLYQTGKTQSELCKDYGVSASALAKWIKQYSQVKLEDNSVLTAKQIQEL
QKRNAQLEEENLILKKASAIFMQNLK

Sequences:

>Translated_106_residues
MLQSVLKDTKTKGQPMSTVKRYDEEFKQSLVNLYQTGKTQSELCKDYGVSASALAKWIKQYSQVKLEDNSVLTAKQIQEL
QKRNAQLEEENLILKKASAIFMQNLK
>Mature_106_residues
MLQSVLKDTKTKGQPMSTVKRYDEEFKQSLVNLYQTGKTQSELCKDYGVSASALAKWIKQYSQVKLEDNSVLTAKQIQEL
QKRNAQLEEENLILKKASAIFMQNLK

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12159; Mature: 12159

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQSVLKDTKTKGQPMSTVKRYDEEFKQSLVNLYQTGKTQSELCKDYGVSASALAKWIKQ
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
YSQVKLEDNSVLTAKQIQELQKRNAQLEEENLILKKASAIFMQNLK
HHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLQSVLKDTKTKGQPMSTVKRYDEEFKQSLVNLYQTGKTQSELCKDYGVSASALAKWIKQ
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
YSQVKLEDNSVLTAKQIQELQKRNAQLEEENLILKKASAIFMQNLK
HHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA