Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is gltX [H]
Identifier: 30410812
GI number: 30410812
Start: 75095
End: 76552
Strand: Direct
Name: gltX [H]
Synonym: BUsg065
Alternate gene names: 30410812
Gene position: 75095-76552 (Clockwise)
Preceding gene: 21672351
Following gene: 21672359
Centisome position: 11.71
GC content: 24.97
Gene sequence:
>1458_bases ATGAATCAAATAAAATTTTTAGTTAAGGAACTTATGAAAGTAAAAACTCGTTTTGCACCTAGTCCTACTGGAAATTTACA TATTGGTAGTATTCGTACGGCTTTGTATTCTTGGTTATTTGCACGTCACTATCATGGAAAATTCATTCTTCGTATCGAAG ATACAGATTTTGAACGTTTTGATTCAAAATCCGTTGAATCTATTTTATATGGATTAAAATGGTTAGGATTAAATTGGGAT GAAGGTCCTTATTTCCAGAGTAAAAGATTAGAAAGGTATAAAGAAGTTATTAAAATGATGTTAGAATCAGGTAATGCTTA TAAATGTTTTTGTTCAGTAAAAGAATTAGAAGATGAGCGAATAAGACAAGTTTCTAAAGGAAAAAAACCACGATACAGTG GAATTTGTAGAAATTTACATTATAGAAATTATATTGCTAATGAAAATTATGTAGTACGATTTAAAAATCCGATTTCAGGT CAAGTAACATTCGAAGATAAAATTAGAGGTAAGATTACTTTTCAAAACGAAGAATTAGATGATCTTGTAATTCAACGTTC TAACGGAATTCCTACATATAATTTTTGCGTGGTGATAGATGATTTAGATATGAATATAACTCATGTTATTCGTGGTGAAG ATCATATTAATAATACTCCTCGTCAAATAAATATTTTAAAATCCTTAAATGCTAAAATACCTATTTATGCTCATGTTTCA ATGATTTTTAATGAAGATGGACATAAATTTTCTAAAAGACAAGATGCTTTGAACATTTTAGAATATTGTAAAGATGGTTT TTTACCAGAAGCTTTACTGAATTATGTAATACGTTTAGGTTGGTCTTGTGGTAATCAAGAGATTTTTAGTATTTCAGAAA TGAAAGAATTATTTGATTTAAGAAAAATTAGTAAGTCTTCTAGTGCTGTAAGTATGAAAAAACTTTTTTGGTTAAATAAA TATTACATTAATAATTTACCGTTAAGTTATATTTCGAATCTTTTAAAAGATCATATGAATCATGAAAAGATTAATTTAAA AAATGGACCTGATTTAGAATCTGTTTTGACTTTATTAAAAAATCGTCATCATACTTTAAAAGAAATTGCTCAATCTTCTA GATATTTTTATGAAGAATTTGCTAATTTTGATAAATCAGCAGCAGATGAATATTTAATTCCAGAAAATCATTTTATTTTA AAAAATTTATATAAGAATATAAAAAAAATATCTATTTGGAGTAATGAGACATTATCTTCATTGATTAAAAATGATTGCAT TAAACTTAAAATTACATTAAGAAAAATAAGCATGTTATTACGTGTTGTATTAACAGGAAATATATTTTCGCCGAGTATAA GTTCTGTGATTTTTTTAATTGGAAAAGAGAAGACTTTATTAAGACTAAAAAAAGCAATTTTATTTATTGATAATAAAATT AAAAATATAAATAATTAG
Upstream 100 bases:
>100_bases TTGTTTGTTGTAAATTTAATCATTATGATTAAATAATTATCTATAATTTAATATTTATAAAATTAATCTATAGAATTTTA AAAAATGTAATATGAAGTAT
Downstream 100 bases:
>100_bases AAAAGAATAACTATTAATGAAAAAAATTAACAAATTGTTTTCACTTAAAGTCGTTTTAAAATTAATTAAAAGAAATTTGA TAGATCTTTTTTAATAAGAT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MNQIKFLVKELMKVKTRFAPSPTGNLHIGSIRTALYSWLFARHYHGKFILRIEDTDFERFDSKSVESILYGLKWLGLNWD EGPYFQSKRLERYKEVIKMMLESGNAYKCFCSVKELEDERIRQVSKGKKPRYSGICRNLHYRNYIANENYVVRFKNPISG QVTFEDKIRGKITFQNEELDDLVIQRSNGIPTYNFCVVIDDLDMNITHVIRGEDHINNTPRQINILKSLNAKIPIYAHVS MIFNEDGHKFSKRQDALNILEYCKDGFLPEALLNYVIRLGWSCGNQEIFSISEMKELFDLRKISKSSSAVSMKKLFWLNK YYINNLPLSYISNLLKDHMNHEKINLKNGPDLESVLTLLKNRHHTLKEIAQSSRYFYEEFANFDKSAADEYLIPENHFIL KNLYKNIKKISIWSNETLSSLIKNDCIKLKITLRKISMLLRVVLTGNIFSPSISSVIFLIGKEKTLLRLKKAILFIDNKI KNINN
Sequences:
>Translated_485_residues MNQIKFLVKELMKVKTRFAPSPTGNLHIGSIRTALYSWLFARHYHGKFILRIEDTDFERFDSKSVESILYGLKWLGLNWD EGPYFQSKRLERYKEVIKMMLESGNAYKCFCSVKELEDERIRQVSKGKKPRYSGICRNLHYRNYIANENYVVRFKNPISG QVTFEDKIRGKITFQNEELDDLVIQRSNGIPTYNFCVVIDDLDMNITHVIRGEDHINNTPRQINILKSLNAKIPIYAHVS MIFNEDGHKFSKRQDALNILEYCKDGFLPEALLNYVIRLGWSCGNQEIFSISEMKELFDLRKISKSSSAVSMKKLFWLNK YYINNLPLSYISNLLKDHMNHEKINLKNGPDLESVLTLLKNRHHTLKEIAQSSRYFYEEFANFDKSAADEYLIPENHFIL KNLYKNIKKISIWSNETLSSLIKNDCIKLKITLRKISMLLRVVLTGNIFSPSISSVIFLIGKEKTLLRLKKAILFIDNKI KNINN >Mature_485_residues MNQIKFLVKELMKVKTRFAPSPTGNLHIGSIRTALYSWLFARHYHGKFILRIEDTDFERFDSKSVESILYGLKWLGLNWD EGPYFQSKRLERYKEVIKMMLESGNAYKCFCSVKELEDERIRQVSKGKKPRYSGICRNLHYRNYIANENYVVRFKNPISG QVTFEDKIRGKITFQNEELDDLVIQRSNGIPTYNFCVVIDDLDMNITHVIRGEDHINNTPRQINILKSLNAKIPIYAHVS MIFNEDGHKFSKRQDALNILEYCKDGFLPEALLNYVIRLGWSCGNQEIFSISEMKELFDLRKISKSSSAVSMKKLFWLNK YYINNLPLSYISNLLKDHMNHEKINLKNGPDLESVLTLLKNRHHTLKEIAQSSRYFYEEFANFDKSAADEYLIPENHFIL KNLYKNIKKISIWSNETLSSLIKNDCIKLKITLRKISMLLRVVLTGNIFSPSISSVIFLIGKEKTLLRLKKAILFIDNKI KNINN
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=331, Percent_Identity=35.3474320241692, Blast_Score=214, Evalue=2e-55, Organism=Escherichia coli, GI1788743, Length=465, Percent_Identity=53.9784946236559, Blast_Score=543, Evalue=1e-155, Organism=Escherichia coli, GI226510925, Length=257, Percent_Identity=37.3540856031128, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1786895, Length=211, Percent_Identity=27.9620853080569, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71993394, Length=478, Percent_Identity=32.6359832635983, Blast_Score=225, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6324540, Length=505, Percent_Identity=31.6831683168317, Blast_Score=234, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6321192, Length=223, Percent_Identity=29.5964125560538, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324742, Length=217, Percent_Identity=25.8064516129032, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI24665321, Length=491, Percent_Identity=31.1608961303462, Blast_Score=220, Evalue=2e-57,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 56758; Mature: 56758
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIKFLVKELMKVKTRFAPSPTGNLHIGSIRTALYSWLFARHYHGKFILRIEDTDFERF CCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHH DSKSVESILYGLKWLGLNWDEGPYFQSKRLERYKEVIKMMLESGNAYKCFCSVKELEDER CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHH IRQVSKGKKPRYSGICRNLHYRNYIANENYVVRFKNPISGQVTFEDKIRGKITFQNEELD HHHHHCCCCCCHHHHHHHCHHHHEECCCCEEEEECCCCCCEEEEECCCCEEEEECCCCHH DLVIQRSNGIPTYNFCVVIDDLDMNITHVIRGEDHINNTPRQINILKSLNAKIPIYAHVS HHHHCCCCCCCEEEEEEEEECCCCCEEEEECCCHHCCCCCHHHHHHHHCCCCCCEEEEEE MIFNEDGHKFSKRQDALNILEYCKDGFLPEALLNYVIRLGWSCGNQEIFSISEMKELFDL EEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHH RKISKSSSAVSMKKLFWLNKYYINNLPLSYISNLLKDHMNHEKINLKNGPDLESVLTLLK HHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH NRHHTLKEIAQSSRYFYEEFANFDKSAADEYLIPENHFILKNLYKNIKKISIWSNETLSS CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCHHHHH LIKNDCIKLKITLRKISMLLRVVLTGNIFSPSISSVIFLIGKEKTLLRLKKAILFIDNKI HHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHH KNINN CCCCC >Mature Secondary Structure MNQIKFLVKELMKVKTRFAPSPTGNLHIGSIRTALYSWLFARHYHGKFILRIEDTDFERF CCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHH DSKSVESILYGLKWLGLNWDEGPYFQSKRLERYKEVIKMMLESGNAYKCFCSVKELEDER CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHH IRQVSKGKKPRYSGICRNLHYRNYIANENYVVRFKNPISGQVTFEDKIRGKITFQNEELD HHHHHCCCCCCHHHHHHHCHHHHEECCCCEEEEECCCCCCEEEEECCCCEEEEECCCCHH DLVIQRSNGIPTYNFCVVIDDLDMNITHVIRGEDHINNTPRQINILKSLNAKIPIYAHVS HHHHCCCCCCCEEEEEEEEECCCCCEEEEECCCHHCCCCCHHHHHHHHCCCCCCEEEEEE MIFNEDGHKFSKRQDALNILEYCKDGFLPEALLNYVIRLGWSCGNQEIFSISEMKELFDL EEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHH RKISKSSSAVSMKKLFWLNKYYINNLPLSYISNLLKDHMNHEKINLKNGPDLESVLTLLK HHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH NRHHTLKEIAQSSRYFYEEFANFDKSAADEYLIPENHFILKNLYKNIKKISIWSNETLSS CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCHHHHH LIKNDCIKLKITLRKISMLLRVVLTGNIFSPSISSVIFLIGKEKTLLRLKKAILFIDNKI HHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHH KNINN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]