| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is yfgM [C]
Identifier: 21672839
GI number: 21672839
Start: 640437
End: 641021
Strand: Reverse
Name: yfgM [C]
Synonym: BUsg583
Alternate gene names: 21672839
Gene position: 641021-640437 (Counterclockwise)
Preceding gene: NA
Following gene: 21672838
Centisome position: 99.93
GC content: 17.78
Gene sequence:
>585_bases ATGCATTTAAATAAAATGAAAAAAGTATCTTTAAAAACATATTTAGTATTATTTTTTCTCATTTTTTTTATATTTTGTAG TTTTTGGTTTATAAAACCAAAAGAAAAGAAATTAAAATTAGAAAAATTAAGATATGAAGAAGTAATAAAAAAAATAAATG CAAAGAACAATCAAAATCTAAAAAGTGTTGAAAATTTTATTACAGAAAATAAAAATATTTATGGCACTTTATCTTCTCTT TTTTTAGCAAAAAAATATATTTTAGATAAAAATTTAGATAAAGCTTTAATACAATTAAACAATAGCTTAAAATATACAAA AGAAGAAAATTTACAAAACATTCTAAAAATAAGAATCGCAAAAATAAAAATACAACAAAATAAAAATCAAGATGCAATAA AAATACTAGAAGAAATAAAAGACAATTCTTGGAAAAATATAGTAGAAAACATGAAAGGTGATATTTTTATGAAAAATAAA GAGATTAAAAAAGCAATATTAGCATGGAAAAAAAGTAAATACCTTGAAAAATCTAATGCATCTAAAGAAATTATTAACAT GAAAATTAACGAAATAAAAAGATAA
Upstream 100 bases:
>100_bases ATTCATTATAATTTTTTTTAAAAATTAAAAAAATATCTCCGTATAAAAGGTGTTTTTAAACAATATATTTTTAAAAAACA AGGAATAAGGAAAAATAGAA
Downstream 100 bases:
>100_bases ATGCAAAAATTAAAATAAAAATGGATATCTTATTATGTTACCTATAATCGTATTAATTGGACGCACTAATGTAGGAAAAT CTACTTTATTTAATATATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MHLNKMKKVSLKTYLVLFFLIFFIFCSFWFIKPKEKKLKLEKLRYEEVIKKINAKNNQNLKSVENFITENKNIYGTLSSL FLAKKYILDKNLDKALIQLNNSLKYTKEENLQNILKIRIAKIKIQQNKNQDAIKILEEIKDNSWKNIVENMKGDIFMKNK EIKKAILAWKKSKYLEKSNASKEIINMKINEIKR
Sequences:
>Translated_194_residues MHLNKMKKVSLKTYLVLFFLIFFIFCSFWFIKPKEKKLKLEKLRYEEVIKKINAKNNQNLKSVENFITENKNIYGTLSSL FLAKKYILDKNLDKALIQLNNSLKYTKEENLQNILKIRIAKIKIQQNKNQDAIKILEEIKDNSWKNIVENMKGDIFMKNK EIKKAILAWKKSKYLEKSNASKEIINMKINEIKR >Mature_194_residues MHLNKMKKVSLKTYLVLFFLIFFIFCSFWFIKPKEKKLKLEKLRYEEVIKKINAKNNQNLKSVENFITENKNIYGTLSSL FLAKKYILDKNLDKALIQLNNSLKYTKEENLQNILKIRIAKIKIQQNKNQDAIKILEEIKDNSWKNIVENMKGDIFMKNK EIKKAILAWKKSKYLEKSNASKEIINMKINEIKR
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0070 family
Homologues:
Organism=Escherichia coli, GI1788860, Length=149, Percent_Identity=32.8859060402685, Blast_Score=96, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y583_BUCAP (O51880)
Other databases:
- EMBL: AF008210 - EMBL: AE013218 - RefSeq: NP_660906.1 - EnsemblBacteria: EBBUCT00000000005 - GeneID: 1005617 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg583 - GeneTree: EBGT00050000008169 - HOGENOM: HBG038988 - OMA: DISEPNI - ProtClustDB: CLSK316596 - BioCyc: BAPH198804:BUSG583-MONOMER - GO: GO:0005488 - InterPro: IPR011990 - Gene3D: G3DSA:1.25.40.10
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23180; Mature: 23180
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xbc8f69c)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLNKMKKVSLKTYLVLFFLIFFIFCSFWFIKPKEKKLKLEKLRYEEVIKKINAKNNQNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH KSVENFITENKNIYGTLSSLFLAKKYILDKNLDKALIQLNNSLKYTKEENLQNILKIRIA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH KIKIQQNKNQDAIKILEEIKDNSWKNIVENMKGDIFMKNKEIKKAILAWKKSKYLEKSNA HHEEECCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCC SKEIINMKINEIKR HHHHHHHHHHHHCH >Mature Secondary Structure MHLNKMKKVSLKTYLVLFFLIFFIFCSFWFIKPKEKKLKLEKLRYEEVIKKINAKNNQNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH KSVENFITENKNIYGTLSSLFLAKKYILDKNLDKALIQLNNSLKYTKEENLQNILKIRIA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH KIKIQQNKNQDAIKILEEIKDNSWKNIVENMKGDIFMKNKEIKKAILAWKKSKYLEKSNA HHEEECCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCC SKEIINMKINEIKR HHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9516544; 12089438