| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is flgK
Identifier: 21672610
GI number: 21672610
Start: 378742
End: 380376
Strand: Direct
Name: flgK
Synonym: BUsg334
Alternate gene names: 21672610
Gene position: 378742-380376 (Clockwise)
Preceding gene: 21672609
Following gene: 21672612
Centisome position: 59.04
GC content: 23.67
Gene sequence:
>1635_bases ATGAGCTCTATATTAACTTCTACTGTCACTGGAATAGATGCTATAAAGATATTAATCAATAACACTGCTGACAAAATTAT TAATTCAAAATACAAAGACGAAATAAAACATAATGTTTTTGTAGAGAATACTGTAGATGAATCTAATTTTAATGCAGGAG TCAAAATAAAAAAGATATATGATGACTACAACGATTTTCTTAAAGAAGAAAAACGAAAAATTAGCGAAAGAGTACAAGAC GAACAAACGAAAATAGAAGAATATTTAAAACTAGAAGATTTATTTGGAGAAAAATCAAATATTTTTACTCTTTTAATAAA TCAACTTTATTCTTCTATAGAAAATGATATTGTTAATAACCACGGTAATGTCTTTAATGAAAACATAGAAAACAATTTAA ATACAATTATTCATGAATTAAAAAATTTTGATGAAAAATTAAGTTTTTTAGAAAGAGATGTTAAAGAATCAATAAAAGAA AAAATAAAACAAGCTAATATTTTAATAAATAAAATTTATGATACTAATATCGACATTCGATTTTTTCCCACTGCTCAATT GCCTAACAGAATAGATAGTTTTATAGATAAAAGAGATAAATTAATTGATGAATTAAATGATATAATAGGAGTTAAGGTAA TTAAAGAAAACAGTACTTTTAAAGTATGCTTAAATAATGGTATGTGTATTATAGATGATTATAATAAAAAAAATTTAATG ACATTAACTTCTGACACTGACGATAAATATATAAGCGTAGGATACTTTGATGATAATGAACAAAGATTAAAAAAAATAGA ACATATGATTCCAAGTGCATCTCTAGGAGCTCTTCTTACGTTTCGTAGAGAAGACCTACAAAATGCAAAAAATAAAATTG GACAATTAACTATAAATTTTGCTGATAGTATTAATAGTGTACATACACTAGGATACGATATTCTTGGTAATATTGGAAAA CAAGTTTTTAAAATTAGTAATCCAGAAATTATATCTAGTTCACAAAATCAATCGTATCTTCCTACATCTATTAAATGGGT TGATACTGCTGATGCACAAGATACTAATTATATCGTTTTTTTAAAAAATAATCATTGGACAGTTACAAGATTGCGAGATC ATTCAGTAGTCGAACCAGATATATATCAACAAGATAACAATACATATATTACTTTTGATGGAATTGAATTTAAGATTGAA GGAAATGATGCTGAAGGTAATATGTATATGATTAAACCATATTCTAAAACTTTAAATGAACTGGAATTATTAATTATTAA AAATGATCTTTTTTCAATTTCTTCATCAGATGATTTAAATCAAAAAAATAGAAATAATGCAATAAAAATACAGCATTTAC ATCAAGAAAAAATAGTTAACAAAAAAGAAACATTATATGAATCTTATCTCAGATTTTTAAAATCTATATCTTATAAATGT AACGATCTTGAAGAAAAGGTACCTTTTAAGCGCAATATGATTGAAATATTAAATAATAAAAAGCTATCAGAATCTGATGA TATGTATGAAAATTATCAAAATTTAAATTATGAACAAAAATGTTATCTTGCAAATGTTAAGGTTTTAAAAATGGCTGAAA CAATTTTTGATGAAATTGTTGATTGTTATAGTTAA
Upstream 100 bases:
>100_bases TCAAAAGAAATAGCTAAAAGGGGTATAGGATTAACACATATTATTTTACAACAAATTCAAAAAATAAATAATAACTTTTA TTTATGAAAAGGGAAGTCAA
Downstream 100 bases:
>100_bases TTTTAAAAAATTAAACAATATTTTATAAAAAATAAAAACTTACTTAAAATGGTAAGTTTTTATTTTTCATAAAAATTTTA TTTTTAATAAATAGTGTATT
Product: flagellar hook-associated protein 1
Products: NA
Alternate protein names: HAP1
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MSSILTSTVTGIDAIKILINNTADKIINSKYKDEIKHNVFVENTVDESNFNAGVKIKKIYDDYNDFLKEEKRKISERVQD EQTKIEEYLKLEDLFGEKSNIFTLLINQLYSSIENDIVNNHGNVFNENIENNLNTIIHELKNFDEKLSFLERDVKESIKE KIKQANILINKIYDTNIDIRFFPTAQLPNRIDSFIDKRDKLIDELNDIIGVKVIKENSTFKVCLNNGMCIIDDYNKKNLM TLTSDTDDKYISVGYFDDNEQRLKKIEHMIPSASLGALLTFRREDLQNAKNKIGQLTINFADSINSVHTLGYDILGNIGK QVFKISNPEIISSSQNQSYLPTSIKWVDTADAQDTNYIVFLKNNHWTVTRLRDHSVVEPDIYQQDNNTYITFDGIEFKIE GNDAEGNMYMIKPYSKTLNELELLIIKNDLFSISSSDDLNQKNRNNAIKIQHLHQEKIVNKKETLYESYLRFLKSISYKC NDLEEKVPFKRNMIEILNNKKLSESDDMYENYQNLNYEQKCYLANVKVLKMAETIFDEIVDCYS
Sequences:
>Translated_544_residues MSSILTSTVTGIDAIKILINNTADKIINSKYKDEIKHNVFVENTVDESNFNAGVKIKKIYDDYNDFLKEEKRKISERVQD EQTKIEEYLKLEDLFGEKSNIFTLLINQLYSSIENDIVNNHGNVFNENIENNLNTIIHELKNFDEKLSFLERDVKESIKE KIKQANILINKIYDTNIDIRFFPTAQLPNRIDSFIDKRDKLIDELNDIIGVKVIKENSTFKVCLNNGMCIIDDYNKKNLM TLTSDTDDKYISVGYFDDNEQRLKKIEHMIPSASLGALLTFRREDLQNAKNKIGQLTINFADSINSVHTLGYDILGNIGK QVFKISNPEIISSSQNQSYLPTSIKWVDTADAQDTNYIVFLKNNHWTVTRLRDHSVVEPDIYQQDNNTYITFDGIEFKIE GNDAEGNMYMIKPYSKTLNELELLIIKNDLFSISSSDDLNQKNRNNAIKIQHLHQEKIVNKKETLYESYLRFLKSISYKC NDLEEKVPFKRNMIEILNNKKLSESDDMYENYQNLNYEQKCYLANVKVLKMAETIFDEIVDCYS >Mature_543_residues SSILTSTVTGIDAIKILINNTADKIINSKYKDEIKHNVFVENTVDESNFNAGVKIKKIYDDYNDFLKEEKRKISERVQDE QTKIEEYLKLEDLFGEKSNIFTLLINQLYSSIENDIVNNHGNVFNENIENNLNTIIHELKNFDEKLSFLERDVKESIKEK IKQANILINKIYDTNIDIRFFPTAQLPNRIDSFIDKRDKLIDELNDIIGVKVIKENSTFKVCLNNGMCIIDDYNKKNLMT LTSDTDDKYISVGYFDDNEQRLKKIEHMIPSASLGALLTFRREDLQNAKNKIGQLTINFADSINSVHTLGYDILGNIGKQ VFKISNPEIISSSQNQSYLPTSIKWVDTADAQDTNYIVFLKNNHWTVTRLRDHSVVEPDIYQQDNNTYITFDGIEFKIEG NDAEGNMYMIKPYSKTLNELELLIIKNDLFSISSSDDLNQKNRNNAIKIQHLHQEKIVNKKETLYESYLRFLKSISYKCN DLEEKVPFKRNMIEILNNKKLSESDDMYENYQNLNYEQKCYLANVKVLKMAETIFDEIVDCYS
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family
Homologues:
Organism=Escherichia coli, GI1787323, Length=550, Percent_Identity=23.6363636363636, Blast_Score=209, Evalue=3e-55,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGK_BUCAP (Q8K9K0)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660677.1 - ProteinModelPortal: Q8K9K0 - SMR: Q8K9K0 - EnsemblBacteria: EBBUCT00000000041 - GeneID: 1005563 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg334 - GeneTree: EBGT00050000007858 - HOGENOM: HBG366217 - OMA: NFADSIN - ProtClustDB: CLSK315914 - BioCyc: BAPH198804:BUSG334-MONOMER - InterPro: IPR002371 - PRINTS: PR01005
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63318; Mature: 63187
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSILTSTVTGIDAIKILINNTADKIINSKYKDEIKHNVFVENTVDESNFNAGVKIKKIY CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEHHH DDYNDFLKEEKRKISERVQDEQTKIEEYLKLEDLFGEKSNIFTLLINQLYSSIENDIVNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC HGNVFNENIENNLNTIIHELKNFDEKLSFLERDVKESIKEKIKQANILINKIYDTNIDIR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEE FFPTAQLPNRIDSFIDKRDKLIDELNDIIGVKVIKENSTFKVCLNNGMCIIDDYNKKNLM EECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCEEEEECCCCCCEE TLTSDTDDKYISVGYFDDNEQRLKKIEHMIPSASLGALLTFRREDLQNAKNKIGQLTINF EEECCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEE ADSINSVHTLGYDILGNIGKQVFKISNPEIISSSQNQSYLPTSIKWVDTADAQDTNYIVF HHCCCHHHHHHHHHHHHHHHHHEECCCCCEECCCCCCCCCCCCEEEEECCCCCCCCEEEE LKNNHWTVTRLRDHSVVEPDIYQQDNNTYITFDGIEFKIEGNDAEGNMYMIKPYSKTLNE EECCCEEEEEECCCCCCCCCCEECCCCEEEEECCEEEEEECCCCCCCEEEECCHHHHHCC LELLIIKNDLFSISSSDDLNQKNRNNAIKIQHLHQEKIVNKKETLYESYLRFLKSISYKC EEEEEEECCCEECCCCCCCCCCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCC NDLEEKVPFKRNMIEILNNKKLSESDDMYENYQNLNYEQKCYLANVKVLKMAETIFDEIV CCHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHH DCYS HHCC >Mature Secondary Structure SSILTSTVTGIDAIKILINNTADKIINSKYKDEIKHNVFVENTVDESNFNAGVKIKKIY CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEHHH DDYNDFLKEEKRKISERVQDEQTKIEEYLKLEDLFGEKSNIFTLLINQLYSSIENDIVNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC HGNVFNENIENNLNTIIHELKNFDEKLSFLERDVKESIKEKIKQANILINKIYDTNIDIR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEE FFPTAQLPNRIDSFIDKRDKLIDELNDIIGVKVIKENSTFKVCLNNGMCIIDDYNKKNLM EECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCEEEEECCCCCCEE TLTSDTDDKYISVGYFDDNEQRLKKIEHMIPSASLGALLTFRREDLQNAKNKIGQLTINF EEECCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEE ADSINSVHTLGYDILGNIGKQVFKISNPEIISSSQNQSYLPTSIKWVDTADAQDTNYIVF HHCCCHHHHHHHHHHHHHHHHHEECCCCCEECCCCCCCCCCCCEEEEECCCCCCCCEEEE LKNNHWTVTRLRDHSVVEPDIYQQDNNTYITFDGIEFKIEGNDAEGNMYMIKPYSKTLNE EECCCEEEEEECCCCCCCCCCEECCCCEEEEECCEEEEEECCCCCCCEEEECCHHHHHCC LELLIIKNDLFSISSSDDLNQKNRNNAIKIQHLHQEKIVNKKETLYESYLRFLKSISYKC EEEEEEECCCEECCCCCCCCCCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCC NDLEEKVPFKRNMIEILNNKKLSESDDMYENYQNLNYEQKCYLANVKVLKMAETIFDEIV CCHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHH DCYS HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438