| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is flgJ
Identifier: 21672609
GI number: 21672609
Start: 378408
End: 378728
Strand: Direct
Name: flgJ
Synonym: BUsg333
Alternate gene names: 21672609
Gene position: 378408-378728 (Clockwise)
Preceding gene: 21672608
Following gene: 21672610
Centisome position: 58.99
GC content: 21.18
Gene sequence:
>321_bases ATGAAAAACGATTTATCTTTATTTAATATAATAAACTATAGAACAAAATTTATTAATGATTTAAAATATCAAGTAAAAAA TAATCCCAAAAAATATCAGCTAGAAACAGCAAAGGAGGTAGAGAGTCTTTTTATTCAGATGCTATTAAAAAGTATGAGAA ATTCTTTAACACAAGATAATTTATTAGATAGTAATCAAAGTCGTTTCTATACAGAAATTTATGACCAAAAAATTTCAAAA GAAATAGCTAAAAGGGGTATAGGATTAACACATATTATTTTACAACAAATTCAAAAAATAAATAATAACTTTTATTTATG A
Upstream 100 bases:
>100_bases GGGTATTAAATTCTTTAGGAACAAAACCTAACGAATTGATATCTATTCTGCAATTAATGAAAAATGCTGGTTGTCTTCAT GCTAAATTGGAAATTGTTTA
Downstream 100 bases:
>100_bases AAAGGGAAGTCAAATGAGCTCTATATTAACTTCTACTGTCACTGGAATAGATGCTATAAAGATATTAATCAATAACACTG CTGACAAAATTATTAATTCA
Product: flagellar protein flgJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MKNDLSLFNIINYRTKFINDLKYQVKNNPKKYQLETAKEVESLFIQMLLKSMRNSLTQDNLLDSNQSRFYTEIYDQKISK EIAKRGIGLTHIILQQIQKINNNFYL
Sequences:
>Translated_106_residues MKNDLSLFNIINYRTKFINDLKYQVKNNPKKYQLETAKEVESLFIQMLLKSMRNSLTQDNLLDSNQSRFYTEIYDQKISK EIAKRGIGLTHIILQQIQKINNNFYL >Mature_106_residues MKNDLSLFNIINYRTKFINDLKYQVKNNPKKYQLETAKEVESLFIQMLLKSMRNSLTQDNLLDSNQSRFYTEIYDQKISK EIAKRGIGLTHIILQQIQKINNNFYL
Specific function: Flagellum-Specific Muramidase Which Hydrolyzes The Peptidoglycan Layer To Assemble The Rod Structure In The Periplasmic Space (By Similarity). [C]
COG id: COG3951
COG function: function code MNO; Rod binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgJ family
Homologues:
Organism=Escherichia coli, GI1787321, Length=98, Percent_Identity=34.6938775510204, Blast_Score=78, Evalue=1e-16,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGJ_BUCAP (Q8K9K1)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660676.1 - EnsemblBacteria: EBBUCT00000000108 - GeneID: 1005559 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg333 - GeneTree: EBGT00050000007767 - HOGENOM: HBG366216 - OMA: GLTHIIL - ProtClustDB: CLSK493054 - BioCyc: BAPH198804:BUSG333-MONOMER - InterPro: IPR000423 - InterPro: IPR019301 - PRINTS: PR01002
Pfam domain/function: PF10135 Rod-binding
EC number: 3.2.1.-
Molecular weight: Translated: 12666; Mature: 12666
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDLSLFNIINYRTKFINDLKYQVKNNPKKYQLETAKEVESLFIQMLLKSMRNSLTQDN CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDSNQSRFYTEIYDQKISKEIAKRGIGLTHIILQQIQKINNNFYL HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKNDLSLFNIINYRTKFINDLKYQVKNNPKKYQLETAKEVESLFIQMLLKSMRNSLTQDN CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDSNQSRFYTEIYDQKISKEIAKRGIGLTHIILQQIQKINNNFYL HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438