Definition Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome.
Accession NC_004061
Length 641,454

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The map label for this gene is flgJ

Identifier: 21672609

GI number: 21672609

Start: 378408

End: 378728

Strand: Direct

Name: flgJ

Synonym: BUsg333

Alternate gene names: 21672609

Gene position: 378408-378728 (Clockwise)

Preceding gene: 21672608

Following gene: 21672610

Centisome position: 58.99

GC content: 21.18

Gene sequence:

>321_bases
ATGAAAAACGATTTATCTTTATTTAATATAATAAACTATAGAACAAAATTTATTAATGATTTAAAATATCAAGTAAAAAA
TAATCCCAAAAAATATCAGCTAGAAACAGCAAAGGAGGTAGAGAGTCTTTTTATTCAGATGCTATTAAAAAGTATGAGAA
ATTCTTTAACACAAGATAATTTATTAGATAGTAATCAAAGTCGTTTCTATACAGAAATTTATGACCAAAAAATTTCAAAA
GAAATAGCTAAAAGGGGTATAGGATTAACACATATTATTTTACAACAAATTCAAAAAATAAATAATAACTTTTATTTATG
A

Upstream 100 bases:

>100_bases
GGGTATTAAATTCTTTAGGAACAAAACCTAACGAATTGATATCTATTCTGCAATTAATGAAAAATGCTGGTTGTCTTCAT
GCTAAATTGGAAATTGTTTA

Downstream 100 bases:

>100_bases
AAAGGGAAGTCAAATGAGCTCTATATTAACTTCTACTGTCACTGGAATAGATGCTATAAAGATATTAATCAATAACACTG
CTGACAAAATTATTAATTCA

Product: flagellar protein flgJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKNDLSLFNIINYRTKFINDLKYQVKNNPKKYQLETAKEVESLFIQMLLKSMRNSLTQDNLLDSNQSRFYTEIYDQKISK
EIAKRGIGLTHIILQQIQKINNNFYL

Sequences:

>Translated_106_residues
MKNDLSLFNIINYRTKFINDLKYQVKNNPKKYQLETAKEVESLFIQMLLKSMRNSLTQDNLLDSNQSRFYTEIYDQKISK
EIAKRGIGLTHIILQQIQKINNNFYL
>Mature_106_residues
MKNDLSLFNIINYRTKFINDLKYQVKNNPKKYQLETAKEVESLFIQMLLKSMRNSLTQDNLLDSNQSRFYTEIYDQKISK
EIAKRGIGLTHIILQQIQKINNNFYL

Specific function: Flagellum-Specific Muramidase Which Hydrolyzes The Peptidoglycan Layer To Assemble The Rod Structure In The Periplasmic Space (By Similarity). [C]

COG id: COG3951

COG function: function code MNO; Rod binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgJ family

Homologues:

Organism=Escherichia coli, GI1787321, Length=98, Percent_Identity=34.6938775510204, Blast_Score=78, Evalue=1e-16,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGJ_BUCAP (Q8K9K1)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660676.1
- EnsemblBacteria:   EBBUCT00000000108
- GeneID:   1005559
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg333
- GeneTree:   EBGT00050000007767
- HOGENOM:   HBG366216
- OMA:   GLTHIIL
- ProtClustDB:   CLSK493054
- BioCyc:   BAPH198804:BUSG333-MONOMER
- InterPro:   IPR000423
- InterPro:   IPR019301
- PRINTS:   PR01002

Pfam domain/function: PF10135 Rod-binding

EC number: 3.2.1.-

Molecular weight: Translated: 12666; Mature: 12666

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNDLSLFNIINYRTKFINDLKYQVKNNPKKYQLETAKEVESLFIQMLLKSMRNSLTQDN
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDSNQSRFYTEIYDQKISKEIAKRGIGLTHIILQQIQKINNNFYL
HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKNDLSLFNIINYRTKFINDLKYQVKNNPKKYQLETAKEVESLFIQMLLKSMRNSLTQDN
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDSNQSRFYTEIYDQKISKEIAKRGIGLTHIILQQIQKINNNFYL
HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438