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The map label for this gene is yebA [C]

Identifier: 21672586

GI number: 21672586

Start: 354269

End: 355516

Strand: Direct

Name: yebA [C]

Synonym: BUsg310

Alternate gene names: 21672586

Gene position: 354269-355516 (Clockwise)

Preceding gene: 21672585

Following gene: 21672588

Centisome position: 55.23

GC content: 21.31

Gene sequence:

>1248_bases
GTGCAGCAAATCTATAAAATAATTTTTCTATCTTTTAATCAAGATTTTTTTTATAAAACAATTAAAATTTTAATAAATAT
TATTCTTATAGTTATTTTTATACTACTATCAAGTTGCAATTTTTTAACGGATAAAAAAGCGTTTTTTTTAAATAAAGAAT
TCTCTCAGAAAGAAAAAGAATTTAAAAGATTAAAAGAAAAGAAAGAATATTTAAAAAAACATACAATACACAAGCATATT
TTTTCTTATGGAAATACAATAAGTATCTTTTTAAAAAAATCAGGAGTAAAAATAAATGATATATTAAAATTAATCAAAAT
AGATAAAAATTTAAATAATATAACAATTGGACAAAAAATTGTTTGCAAAGTAGATAACTTAGGAAACTTAATTAAGTTAA
AATGGTATATTTCTAAATTTCAAAAAAAAATATACAAAAGATATAAAAATACGTTTAAATTCATCAAATATACGTATGAC
TCTTTTTTAGAAAAAAAAAGTATTTATATTAAAAAAAATTCTAACTTTTTTAAAAGCGCCTATCAATCAGGATTGAATAA
ATCTGAAATAAATAGTGTTATCAAAGCAATAGAATGGCAAATAAATTTTAATAAATTACATATTGGTAGTAAATTTAATG
TGATTTTTTTAAATCAAAAAACAAAAAATAAAAAAATATTATTAGGTGTCAAATTAGATAATTTAGATAGAAAGTATTTT
TCAATAAGAGCATTTAATGGAAAATTTTATGACTCTGATGGTTTTAATAAATCAGAAGAACTGATAAATTTTTCATTTTT
AAAAAAATATCGAATCTCTTCTCCATTTAATTTACGCCGTGTTAATCCAGTTACACATCGTATTAGTCGTCATTTAGGAA
TAGATTTAGCTATGCCTCAAGGAACACCTGTAATTGCTACTAGTAGTGGTAAAATTATAAAAGCACAATTTAATAAAATT
GCAGGTTTTTATATTTCTTTAAAAAATAAAAATTATTATACTACTAGGTATATGCATCTTAAAAAGATTTTAGTTAAAGT
AGGTCAAAAAATTAAAAAAGGTGAAAAAATAGCTTTATCAGGCAATACTGGACGTACCACTGGTCCGCATTTACATTATG
AAATTTGGATTAATCATCGCGCAATAAATCCTATAAAAGCAGAATACATTTTGTCGACACAGCTAACAAAAAGTGAAAGA
ATCAAATATTTAAAAGAGTCTAAAAACATATTATCAAAATTAAAATAA

Upstream 100 bases:

>100_bases
GGTACAGCTATTCCATTAGTACAAGATAGCTATGTAAATTTTCTTGTAAAATTATCTAATCAATATATTAGCTGCTTAAA
AAAAATTTAAGGAAAAAAAA

Downstream 100 bases:

>100_bases
GTTTTTCTAATAGAAATTTTTAATATGTAACTCTTAAAATTCTACTGGTATTCGTTTTACCTATTTTCCCCATTATGTCA
CCTTGAGTGACAATGACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MQQIYKIIFLSFNQDFFYKTIKILINIILIVIFILLSSCNFLTDKKAFFLNKEFSQKEKEFKRLKEKKEYLKKHTIHKHI
FSYGNTISIFLKKSGVKINDILKLIKIDKNLNNITIGQKIVCKVDNLGNLIKLKWYISKFQKKIYKRYKNTFKFIKYTYD
SFLEKKSIYIKKNSNFFKSAYQSGLNKSEINSVIKAIEWQINFNKLHIGSKFNVIFLNQKTKNKKILLGVKLDNLDRKYF
SIRAFNGKFYDSDGFNKSEELINFSFLKKYRISSPFNLRRVNPVTHRISRHLGIDLAMPQGTPVIATSSGKIIKAQFNKI
AGFYISLKNKNYYTTRYMHLKKILVKVGQKIKKGEKIALSGNTGRTTGPHLHYEIWINHRAINPIKAEYILSTQLTKSER
IKYLKESKNILSKLK

Sequences:

>Translated_415_residues
MQQIYKIIFLSFNQDFFYKTIKILINIILIVIFILLSSCNFLTDKKAFFLNKEFSQKEKEFKRLKEKKEYLKKHTIHKHI
FSYGNTISIFLKKSGVKINDILKLIKIDKNLNNITIGQKIVCKVDNLGNLIKLKWYISKFQKKIYKRYKNTFKFIKYTYD
SFLEKKSIYIKKNSNFFKSAYQSGLNKSEINSVIKAIEWQINFNKLHIGSKFNVIFLNQKTKNKKILLGVKLDNLDRKYF
SIRAFNGKFYDSDGFNKSEELINFSFLKKYRISSPFNLRRVNPVTHRISRHLGIDLAMPQGTPVIATSSGKIIKAQFNKI
AGFYISLKNKNYYTTRYMHLKKILVKVGQKIKKGEKIALSGNTGRTTGPHLHYEIWINHRAINPIKAEYILSTQLTKSER
IKYLKESKNILSKLK
>Mature_415_residues
MQQIYKIIFLSFNQDFFYKTIKILINIILIVIFILLSSCNFLTDKKAFFLNKEFSQKEKEFKRLKEKKEYLKKHTIHKHI
FSYGNTISIFLKKSGVKINDILKLIKIDKNLNNITIGQKIVCKVDNLGNLIKLKWYISKFQKKIYKRYKNTFKFIKYTYD
SFLEKKSIYIKKNSNFFKSAYQSGLNKSEINSVIKAIEWQINFNKLHIGSKFNVIFLNQKTKNKKILLGVKLDNLDRKYF
SIRAFNGKFYDSDGFNKSEELINFSFLKKYRISSPFNLRRVNPVTHRISRHLGIDLAMPQGTPVIATSSGKIIKAQFNKI
AGFYISLKNKNYYTTRYMHLKKILVKVGQKIKKGEKIALSGNTGRTTGPHLHYEIWINHRAINPIKAEYILSTQLTKSER
IKYLKESKNILSKLK

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family

Homologues:

Organism=Escherichia coli, GI87081989, Length=440, Percent_Identity=35.2272727272727, Blast_Score=314, Evalue=7e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y310_BUCAP (Q8K9M4)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660653.1
- ProteinModelPortal:   Q8K9M4
- SMR:   Q8K9M4
- MEROPS:   M23.005
- EnsemblBacteria:   EBBUCT00000000394
- GeneID:   1005514
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg310
- GeneTree:   EBGT00050000007838
- HOGENOM:   HBG708607
- OMA:   LHYELHI
- BioCyc:   BAPH198804:BUSG310-MONOMER
- GO:   GO:0006508
- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- PANTHER:   PTHR21666:SF7

Pfam domain/function: PF01551 Peptidase_M23; SSF51261 Dup_hybrid_motif

EC number: 3.4.24.- [C]

Molecular weight: Translated: 48879; Mature: 48879

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xba234f8)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQIYKIIFLSFNQDFFYKTIKILINIILIVIFILLSSCNFLTDKKAFFLNKEFSQKEKE
CCHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHH
FKRLKEKKEYLKKHTIHKHIFSYGNTISIFLKKSGVKINDILKLIKIDKNLNNITIGQKI
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEECCCEE
VCKVDNLGNLIKLKWYISKFQKKIYKRYKNTFKFIKYTYDSFLEKKSIYIKKNSNFFKSA
EEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
YQSGLNKSEINSVIKAIEWQINFNKLHIGSKFNVIFLNQKTKNKKILLGVKLDNLDRKYF
HHCCCCHHHHHHHHHHHEEEEEEEEEEECCEEEEEEEECCCCCCEEEEEEEECCCCCEEE
SIRAFNGKFYDSDGFNKSEELINFSFLKKYRISSPFNLRRVNPVTHRISRHLGIDLAMPQ
EEEEECCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCCEEECCC
GTPVIATSSGKIIKAQFNKIAGFYISLKNKNYYTTRYMHLKKILVKVGQKIKKGEKIALS
CCEEEEECCCCEEEEECCCEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEE
GNTGRTTGPHLHYEIWINHRAINPIKAEYILSTQLTKSERIKYLKESKNILSKLK
CCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MQQIYKIIFLSFNQDFFYKTIKILINIILIVIFILLSSCNFLTDKKAFFLNKEFSQKEKE
CCHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHH
FKRLKEKKEYLKKHTIHKHIFSYGNTISIFLKKSGVKINDILKLIKIDKNLNNITIGQKI
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEECCCEE
VCKVDNLGNLIKLKWYISKFQKKIYKRYKNTFKFIKYTYDSFLEKKSIYIKKNSNFFKSA
EEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
YQSGLNKSEINSVIKAIEWQINFNKLHIGSKFNVIFLNQKTKNKKILLGVKLDNLDRKYF
HHCCCCHHHHHHHHHHHEEEEEEEEEEECCEEEEEEEECCCCCCEEEEEEEECCCCCEEE
SIRAFNGKFYDSDGFNKSEELINFSFLKKYRISSPFNLRRVNPVTHRISRHLGIDLAMPQ
EEEEECCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCCEEECCC
GTPVIATSSGKIIKAQFNKIAGFYISLKNKNYYTTRYMHLKKILVKVGQKIKKGEKIALS
CCEEEEECCCCEEEEECCCEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEE
GNTGRTTGPHLHYEIWINHRAINPIKAEYILSTQLTKSERIKYLKESKNILSKLK
CCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12089438