Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is ygjT [C]
Identifier: 21672450
GI number: 21672450
Start: 180194
End: 181126
Strand: Direct
Name: ygjT [C]
Synonym: BUsg160
Alternate gene names: 21672450
Gene position: 180194-181126 (Clockwise)
Preceding gene: 21672449
Following gene: 21672451
Centisome position: 28.09
GC content: 18.54
Gene sequence:
>933_bases ATGATTTATTTTTTTATCTCATCATTGTTTTTTTTGATTTTAATTACGTTAATGTTCAGTAAAAATATTTTTAAAAATAT AAAAAAAATAAAATTGTTTTCTAAAAATAATTTTTTTTTCTATTTTCTTTTATTTGTATTATTTATTTTTATATTTTGGT TAGTTGTTTATACTGATCAAGGAATTAAAGTAGCCAATCAGAAAATCATTTATTTTTTAACTAGTTACTTTTTAGAAATT TTACTTTCAATTGATAATGTTTTTGCATGGTTTTTTATCTTTAAATCTTTGAAAATACCACTGATTTATCAGAAAAAAGT TTTATTGTACGGTTTATGGGGTGCTTTAATTCTACGTTCTATTTTTTCTTTTTCTGGAAGTTTTTTGTTTTCTAAATGGC ATTGGATTTTATATTTATTCGGGGGATTTTTTATATTAACTAGTTTAAAATTTATTTTTTTTTCTAATTTAGAATGTGAT AATAAAGAAGAAAATATAAAAAAATTATGGATTTATAAATTTTTTAGAGTTACTGAGAATATTAATAACGAAAATTTTTT TGTAAAGATTGAGAAAAAAATATTTATTACGCCTCTATTTGTATCTCTCATTCTTATAGAATTAAGTGATATTGTATTTT CAGTAGATAGTATCCCTGCTGCTTTATCTGTTAATAACGATTTATTTATTATTTTTTCTTCAAATTTTTTTGCTGTTTTA GGTTTAAGATCTATGTATTTATTTACAGCATATTTTTTAAAAAATTTTCCTATAATGAAATATGCTTTATCACTTATTTT AATGTTTATTGGATTTAAAATATTAATTGAAAAATTTTTTACTTTTTCGATTTTTTTAACTCTTGCTGTTATACTGATAA TATTAATTACTACATTTTTAATAAATTTAATTTTTAATTTAAAAAAATGTTAA
Upstream 100 bases:
>100_bases TCCATTAATTAACTTGATAAATTCAGTTCAATAATTTAATAAGTTAGTTTTTATATGAAATTGATCATTTTTATTAAAAA ATATAATAAGAATATTTTTA
Downstream 100 bases:
>100_bases TAATTTTAAAAAAAATATAAAATTTTTTATTAGTAGTGAAAAACATTATTTTTTATGTCATTTTTTATTTTTAGTAAATA TATAAAAATTTTTTTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MIYFFISSLFFLILITLMFSKNIFKNIKKIKLFSKNNFFFYFLLFVLFIFIFWLVVYTDQGIKVANQKIIYFLTSYFLEI LLSIDNVFAWFFIFKSLKIPLIYQKKVLLYGLWGALILRSIFSFSGSFLFSKWHWILYLFGGFFILTSLKFIFFSNLECD NKEENIKKLWIYKFFRVTENINNENFFVKIEKKIFITPLFVSLILIELSDIVFSVDSIPAALSVNNDLFIIFSSNFFAVL GLRSMYLFTAYFLKNFPIMKYALSLILMFIGFKILIEKFFTFSIFLTLAVILIILITTFLINLIFNLKKC
Sequences:
>Translated_310_residues MIYFFISSLFFLILITLMFSKNIFKNIKKIKLFSKNNFFFYFLLFVLFIFIFWLVVYTDQGIKVANQKIIYFLTSYFLEI LLSIDNVFAWFFIFKSLKIPLIYQKKVLLYGLWGALILRSIFSFSGSFLFSKWHWILYLFGGFFILTSLKFIFFSNLECD NKEENIKKLWIYKFFRVTENINNENFFVKIEKKIFITPLFVSLILIELSDIVFSVDSIPAALSVNNDLFIIFSSNFFAVL GLRSMYLFTAYFLKNFPIMKYALSLILMFIGFKILIEKFFTFSIFLTLAVILIILITTFLINLIFNLKKC >Mature_310_residues MIYFFISSLFFLILITLMFSKNIFKNIKKIKLFSKNNFFFYFLLFVLFIFIFWLVVYTDQGIKVANQKIIYFLTSYFLEI LLSIDNVFAWFFIFKSLKIPLIYQKKVLLYGLWGALILRSIFSFSGSFLFSKWHWILYLFGGFFILTSLKFIFFSNLECD NKEENIKKLWIYKFFRVTENINNENFFVKIEKKIFITPLFVSLILIELSDIVFSVDSIPAALSVNNDLFIIFSSNFFAVL GLRSMYLFTAYFLKNFPIMKYALSLILMFIGFKILIEKFFTFSIFLTLAVILIILITTFLINLIFNLKKC
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family
Homologues:
Organism=Escherichia coli, GI48994922, Length=266, Percent_Identity=41.3533834586466, Blast_Score=219, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y160_BUCAP (Q8K9X4)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660517.1 - EnsemblBacteria: EBBUCT00000000038 - GeneID: 1005358 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg160 - GeneTree: EBGT00050000007727 - HOGENOM: HBG292583 - OMA: ADHAREY - BioCyc: BAPH198804:BUSG160-MONOMER - InterPro: IPR005496
Pfam domain/function: PF03741 TerC
EC number: NA
Molecular weight: Translated: 36939; Mature: 36939
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xbfa9f94)-; HASH(0xb9daec4)-; HASH(0x40457e24)-; HASH(0xc099904)-; HASH(0x9652040)-; HASH(0xad69314)-; HASH(0xbffc0ac)-; HASH(0xbffbfbc)-; HASH(0xb35ff1c)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYFFISSLFFLILITLMFSKNIFKNIKKIKLFSKNNFFFYFLLFVLFIFIFWLVVYTDQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCC GIKVANQKIIYFLTSYFLEILLSIDNVFAWFFIFKSLKIPLIYQKKVLLYGLWGALILRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHH IFSFSGSFLFSKWHWILYLFGGFFILTSLKFIFFSNLECDNKEENIKKLWIYKFFRVTEN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC INNENFFVKIEKKIFITPLFVSLILIELSDIVFSVDSIPAALSVNNDLFIIFSSNFFAVL CCCCEEEEEEECCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHH GLRSMYLFTAYFLKNFPIMKYALSLILMFIGFKILIEKFFTFSIFLTLAVILIILITTFL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INLIFNLKKC HHHHHHHCCH >Mature Secondary Structure MIYFFISSLFFLILITLMFSKNIFKNIKKIKLFSKNNFFFYFLLFVLFIFIFWLVVYTDQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCC GIKVANQKIIYFLTSYFLEILLSIDNVFAWFFIFKSLKIPLIYQKKVLLYGLWGALILRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHH IFSFSGSFLFSKWHWILYLFGGFFILTSLKFIFFSNLECDNKEENIKKLWIYKFFRVTEN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC INNENFFVKIEKKIFITPLFVSLILIELSDIVFSVDSIPAALSVNNDLFIIFSSNFFAVL CCCCEEEEEEECCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHH GLRSMYLFTAYFLKNFPIMKYALSLILMFIGFKILIEKFFTFSIFLTLAVILIILITTFL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INLIFNLKKC HHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12089438