Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is folC
Identifier: 21672451
GI number: 21672451
Start: 181237
End: 182493
Strand: Direct
Name: folC
Synonym: BUsg161
Alternate gene names: 21672451
Gene position: 181237-182493 (Clockwise)
Preceding gene: 21672450
Following gene: 21672454
Centisome position: 28.25
GC content: 26.09
Gene sequence:
>1257_bases ATGCACAAAAAAAAATATACCTTTTCTATGTGGATGAAATATTTAGAAAAATTTGATAAAAAAGATAGAAAAAATCTTTT TGAATTAAAACTTATTGCAAAAAAATTAGGTTTATTAAACTTAAAATCCTTTTTTTTTACTGTTGGTGGCACTAATGGAA AAGGAACAACCTGTGCAATGTTAGAAAAATTACTTTTGGATTCAGGTTATCAAGTAGGATTATATACCTCCCCCCATCTT ATAAATTATTCTGAAAGAATTAAAGTTAATGGATTATATCTTAGTGAAAAAGATCACATTTTTTCTTTTTTAATTATAGA TGCTGAAAAAGGTAATGTTTCTTTAACTTACTTTGAATTTATTACTCTTTCAGCCTTATTTCTATTCAGTCAATATTCTT TGGATATAATAATATTAGAAGTAGGTTTAGGAGGACGTTTAGATGCAACTAATATTATAGATTCAGACTTATCTGTTATC ACTAATATAGGGATTGATCATACTTCTTGTTTAGGAACAGATCGAATTAGTATCGGTCGTGAAAAATCTGGGATTTTTAG AAAAGGCAAAATTGCAGTTATTGGAGAAAAAAACATCCCAATTTCTGTTGACGAAATAGCTAAAGAAAAAAAAACAATTT TAAAAAAAATTGATGTAGATTGGTTTTGGACAAGAACAAAAATTGATTCATGGAATTTTATTCATTCAAATATTGAATTA TATAATCTTCCAGTTTCTCGAATACCTTTGTCTAACACTGCTATTGCATTAGCATCTTTATTCTATTCTGGTTTAGAAGT TAATTTAAAAAAATTAAAAAGTAGTATTTCTAAAGTGCAATTATCTGGTAGATTTCAAACAGTTTTTAATTCTCCTCGAA TCATTCTCGATGTTGCTCATAATGTTCATGCGGCCTTATATCTATCAGAAAAAATTGATGAAATAGATACAGAAGGACAA ATATATGCAGTTTTTGGAATCTTAAAAGATAAAGATGTTGCAGGAGTTGTTCAAGTATTACAAAAAAAAATTAACTACTG GTATGTTGTAAACTTAAAAACAAATCGTAGTGCTAGTATAAACTATTTAAAGAAAAAGTTATCCCTTAATAACGCTCTTT TTTTTAATAATATTAATGAAAGTTGGCAAGCGATTAAAAAAGTAATAACTAAAAAAGATATTATTTTAGTCTTTGGTTCT TTTTTTACTGTCTCTGAATTTATGTCTATAAAAGATAGAAGATTAACATTGTATTAA
Upstream 100 bases:
>100_bases AAAAATATAAAATTTTTTATTAGTAGTGAAAAACATTATTTTTTATGTCATTTTTTATTTTTAGTAAATATATAAAAATT TTTTTTAATAAATTGAAAAT
Downstream 100 bases:
>100_bases AAATATAATTTTGGAAAAAAATATGATTTTTATAGATTATGTTTTTCTTTTAATTATTTTTAGTTCTTTTTTTTTAGGAT TATTTCGTGGTTTTATTCAA
Product: dihydrofolate synthase
Products: NA
Alternate protein names: Folylpolyglutamate synthase; Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase; Dihydrofolate synthase
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MHKKKYTFSMWMKYLEKFDKKDRKNLFELKLIAKKLGLLNLKSFFFTVGGTNGKGTTCAMLEKLLLDSGYQVGLYTSPHL INYSERIKVNGLYLSEKDHIFSFLIIDAEKGNVSLTYFEFITLSALFLFSQYSLDIIILEVGLGGRLDATNIIDSDLSVI TNIGIDHTSCLGTDRISIGREKSGIFRKGKIAVIGEKNIPISVDEIAKEKKTILKKIDVDWFWTRTKIDSWNFIHSNIEL YNLPVSRIPLSNTAIALASLFYSGLEVNLKKLKSSISKVQLSGRFQTVFNSPRIILDVAHNVHAALYLSEKIDEIDTEGQ IYAVFGILKDKDVAGVVQVLQKKINYWYVVNLKTNRSASINYLKKKLSLNNALFFNNINESWQAIKKVITKKDIILVFGS FFTVSEFMSIKDRRLTLY
Sequences:
>Translated_418_residues MHKKKYTFSMWMKYLEKFDKKDRKNLFELKLIAKKLGLLNLKSFFFTVGGTNGKGTTCAMLEKLLLDSGYQVGLYTSPHL INYSERIKVNGLYLSEKDHIFSFLIIDAEKGNVSLTYFEFITLSALFLFSQYSLDIIILEVGLGGRLDATNIIDSDLSVI TNIGIDHTSCLGTDRISIGREKSGIFRKGKIAVIGEKNIPISVDEIAKEKKTILKKIDVDWFWTRTKIDSWNFIHSNIEL YNLPVSRIPLSNTAIALASLFYSGLEVNLKKLKSSISKVQLSGRFQTVFNSPRIILDVAHNVHAALYLSEKIDEIDTEGQ IYAVFGILKDKDVAGVVQVLQKKINYWYVVNLKTNRSASINYLKKKLSLNNALFFNNINESWQAIKKVITKKDIILVFGS FFTVSEFMSIKDRRLTLY >Mature_418_residues MHKKKYTFSMWMKYLEKFDKKDRKNLFELKLIAKKLGLLNLKSFFFTVGGTNGKGTTCAMLEKLLLDSGYQVGLYTSPHL INYSERIKVNGLYLSEKDHIFSFLIIDAEKGNVSLTYFEFITLSALFLFSQYSLDIIILEVGLGGRLDATNIIDSDLSVI TNIGIDHTSCLGTDRISIGREKSGIFRKGKIAVIGEKNIPISVDEIAKEKKTILKKIDVDWFWTRTKIDSWNFIHSNIEL YNLPVSRIPLSNTAIALASLFYSGLEVNLKKLKSSISKVQLSGRFQTVFNSPRIILDVAHNVHAALYLSEKIDEIDTEGQ IYAVFGILKDKDVAGVVQVLQKKINYWYVVNLKTNRSASINYLKKKLSLNNALFFNNINESWQAIKKVITKKDIILVFGS FFTVSEFMSIKDRRLTLY
Specific function: Conversion of folates to polyglutamate derivatives
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family
Homologues:
Organism=Homo sapiens, GI66932984, Length=198, Percent_Identity=34.3434343434343, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI66932990, Length=198, Percent_Identity=34.3434343434343, Blast_Score=108, Evalue=9e-24, Organism=Escherichia coli, GI1788654, Length=409, Percent_Identity=45.4767726161369, Blast_Score=377, Evalue=1e-106, Organism=Caenorhabditis elegans, GI71984923, Length=171, Percent_Identity=37.4269005847953, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17553150, Length=171, Percent_Identity=37.4269005847953, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17553148, Length=171, Percent_Identity=37.4269005847953, Blast_Score=113, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6323760, Length=320, Percent_Identity=28.4375, Blast_Score=106, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6324815, Length=232, Percent_Identity=33.1896551724138, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24641571, Length=400, Percent_Identity=25.5, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI24581568, Length=143, Percent_Identity=35.6643356643357, Blast_Score=89, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLC_BUCAP (Q8K9X3)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660518.1 - ProteinModelPortal: Q8K9X3 - SMR: Q8K9X3 - EnsemblBacteria: EBBUCT00000000088 - GeneID: 1005359 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg161 - GeneTree: EBGT00050000008195 - HOGENOM: HBG744947 - OMA: SIHPTEI - ProtClustDB: CLSK315624 - BioCyc: BAPH198804:BUSG161-MONOMER - InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - PANTHER: PTHR11136 - TIGRFAMs: TIGR01499
Pfam domain/function: PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.17; =6.3.2.12
Molecular weight: Translated: 47631; Mature: 47631
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS01011 FOLYLPOLYGLU_SYNT_1; PS01012 FOLYLPOLYGLU_SYNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKKKYTFSMWMKYLEKFDKKDRKNLFELKLIAKKLGLLNLKSFFFTVGGTNGKGTTCAM CCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHH LEKLLLDSGYQVGLYTSPHLINYSERIKVNGLYLSEKDHIFSFLIIDAEKGNVSLTYFEF HHHHHHCCCCEEEEEECCCEECCCCEEEEEEEEECCCCCEEEEEEEEECCCCEEEEHHHH ITLSALFLFSQYSLDIIILEVGLGGRLDATNIIDSDLSVITNIGIDHTSCLGTDRISIGR HHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCCCCCCCC EKSGIFRKGKIAVIGEKNIPISVDEIAKEKKTILKKIDVDWFWTRTKIDSWNFIHSNIEL CCCCCEECCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCEEE YNLPVSRIPLSNTAIALASLFYSGLEVNLKKLKSSISKVQLSGRFQTVFNSPRIILDVAH EECCHHHCCCCHHHHHHHHHHHCCHHEEHHHHHHHHHHEEECCCEEEHHCCCEEEEEECC NVHAALYLSEKIDEIDTEGQIYAVFGILKDKDVAGVVQVLQKKINYWYVVNLKTNRSASI CCEEEEEEHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCEEEEEEEECCCCCHH NYLKKKLSLNNALFFNNINESWQAIKKVITKKDIILVFGSFFTVSEFMSIKDRRLTLY HHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEEC >Mature Secondary Structure MHKKKYTFSMWMKYLEKFDKKDRKNLFELKLIAKKLGLLNLKSFFFTVGGTNGKGTTCAM CCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHH LEKLLLDSGYQVGLYTSPHLINYSERIKVNGLYLSEKDHIFSFLIIDAEKGNVSLTYFEF HHHHHHCCCCEEEEEECCCEECCCCEEEEEEEEECCCCCEEEEEEEEECCCCEEEEHHHH ITLSALFLFSQYSLDIIILEVGLGGRLDATNIIDSDLSVITNIGIDHTSCLGTDRISIGR HHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCCCCCCCC EKSGIFRKGKIAVIGEKNIPISVDEIAKEKKTILKKIDVDWFWTRTKIDSWNFIHSNIEL CCCCCEECCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCEEE YNLPVSRIPLSNTAIALASLFYSGLEVNLKKLKSSISKVQLSGRFQTVFNSPRIILDVAH EECCHHHCCCCHHHHHHHHHHHCCHHEEHHHHHHHHHHEEECCCEEEHHCCCEEEEEECC NVHAALYLSEKIDEIDTEGQIYAVFGILKDKDVAGVVQVLQKKINYWYVVNLKTNRSASI CCEEEEEEHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCEEEEEEEECCCCCHH NYLKKKLSLNNALFFNNINESWQAIKKVITKKDIILVFGSFFTVSEFMSIKDRRLTLY HHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438