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The map label for this gene is yajC [C]

Identifier: 21672416

GI number: 21672416

Start: 140289

End: 140621

Strand: Direct

Name: yajC [C]

Synonym: BUsg126

Alternate gene names: 21672416

Gene position: 140289-140621 (Clockwise)

Preceding gene: 21672415

Following gene: 21672419

Centisome position: 21.87

GC content: 27.03

Gene sequence:

>333_bases
ATGAGTTTTTTTATTAAAGATGCTAATGCAGCAGTGAATCAAGCATTAGAGGGAAATTCTTATTCCTTAATTTTCATGCT
AGTAACATTTATATTAATATTTTATTTTATGCTCTTTCGTCCTCAGCAAAAAAAAGATAAAGAACATAAAAATCTTATGA
ATTCTATTGCTCCAGGAGATGAGGTAATGACAACTAGTGGTTTTTTAGGACGAGTTAAAAAAGTTACAGAAAACGGATAT
GTTTTACTTCAATTAAACAATACCACAGAAATATTTATAAAAAAAGATTTTATAGTTTCATCTCTTCCTAAAGGTACCTT
AGAATCTTTATAA

Upstream 100 bases:

>100_bases
AGAAATGCAATAAAACAAAAAAAGTTTGATGAATTTGTATCAAATTTTTATAATCAAAAAAAATAAATATATTTTTTTAA
TACATTAGGAAAACTATTTA

Downstream 100 bases:

>100_bases
ATAATTTTTAATTAAAATTTTTATGTTTTTTAATATAAGTAAGAAAAATTTGCTATTTTTAAAAAAAATTTTTGAATTTT
TATTAAAAGCAATAATCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSFFIKDANAAVNQALEGNSYSLIFMLVTFILIFYFMLFRPQQKKDKEHKNLMNSIAPGDEVMTTSGFLGRVKKVTENGY
VLLQLNNTTEIFIKKDFIVSSLPKGTLESL

Sequences:

>Translated_110_residues
MSFFIKDANAAVNQALEGNSYSLIFMLVTFILIFYFMLFRPQQKKDKEHKNLMNSIAPGDEVMTTSGFLGRVKKVTENGY
VLLQLNNTTEIFIKKDFIVSSLPKGTLESL
>Mature_109_residues
SFFIKDANAAVNQALEGNSYSLIFMLVTFILIFYFMLFRPQQKKDKEHKNLMNSIAPGDEVMTTSGFLGRVKKVTENGYV
LLQLNNTTEIFIKKDFIVSSLPKGTLESL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family

Homologues:

Organism=Escherichia coli, GI1786608, Length=110, Percent_Identity=60.9090909090909, Blast_Score=147, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y126_BUCAP (Q8KA08)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660483.1
- ProteinModelPortal:   Q8KA08
- SMR:   Q8KA08
- EnsemblBacteria:   EBBUCT00000000392
- GeneID:   1005943
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg126
- GeneTree:   EBGT00050000007790
- HOGENOM:   HBG730023
- OMA:   QQGGGME
- ProtClustDB:   CLSK315483
- BioCyc:   BAPH198804:BUSG126-MONOMER
- InterPro:   IPR003849
- PRINTS:   PR01853
- TIGRFAMs:   TIGR00739

Pfam domain/function: PF02699 YajC

EC number: NA

Molecular weight: Translated: 12491; Mature: 12360

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc294bfc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFIKDANAAVNQALEGNSYSLIFMLVTFILIFYFMLFRPQQKKDKEHKNLMNSIAPGD
CCEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
EVMTTSGFLGRVKKVTENGYVLLQLNNTTEIFIKKDFIVSSLPKGTLESL
CEEECCHHHHHHHHHCCCCEEEEEECCCEEEEEECCHHHHCCCCCCCCCH
>Mature Secondary Structure 
SFFIKDANAAVNQALEGNSYSLIFMLVTFILIFYFMLFRPQQKKDKEHKNLMNSIAPGD
CEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
EVMTTSGFLGRVKKVTENGYVLLQLNNTTEIFIKKDFIVSSLPKGTLESL
CEEECCHHHHHHHHHCCCCEEEEEECCCEEEEEECCHHHHCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438