Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is folE
Identifier: 21672419
GI number: 21672419
Start: 143817
End: 144473
Strand: Direct
Name: folE
Synonym: BUsg129
Alternate gene names: 21672419
Gene position: 143817-144473 (Clockwise)
Preceding gene: 21672416
Following gene: 21672420
Centisome position: 22.42
GC content: 22.68
Gene sequence:
>657_bases ATGATTAAAATCACTAAAGAAGCTAATATTGCACGTAATGTTTTATTATTAAAAGGTTTAGAAAATCCTATTTTAAAAGA ATACAATGATATAAAAGAAAAAGAAAGAGAATTATTAATTGCAGAATATTTATATAAAATTATGTCTTTACTAAATTTAG ATCTAAAAAACGAAAGTTTAAAAGATACACCTATTCGAATATCAAAAATGTATGTTAATGAAATATTTTCTGGTTTAGAT TATAAAAATTTTCCAAAAATTATGTTGATGGATAATAAAATAAAATTTCATGAAATGATTATAGTACGCGATATTCTATT AATAAGCACTTGCGAACATCATTTTATTACTATTAATGGACAAGCTACTATTGCATATATTCCTGAGAATAAAATTATTG GTTTATCTAAAATAAATAGAATTGCACAATTTTTTGCAAAAAGACCTCAAATTCAAGAACGTTTAACAAAACAAATACTT CTAGTTCTGCAAGTTTTATTACAAACTAAAAATGTTGCAATAATTATTCATATGGATCATTTTTGTGTTAAAGCTCGAGG AGTATGTGATACCAGTAGTAGTACTGTTACTTCATGTTTAGATGGTTTATTTAAATCTGATAAAAATATTCGAGAAGAAT TTTTTTTTAAAAAATAA
Upstream 100 bases:
>100_bases ATGATTTTTTTACGTATAAATGTTTTAGTTATAAATCAGTTTAAATGGTTTTCACATGTAAAAATAAAAAGTGTATGATA TTTAATTTAAGGAAAAAATT
Downstream 100 bases:
>100_bases AAAATAGGAATAAATATATCTATTTTATTGATTAAAACAATTTTTCTCAGTATGATATTAATTATTCATTAAAATATATA ATTTTTAAAAAAATCAATTT
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MIKITKEANIARNVLLLKGLENPILKEYNDIKEKERELLIAEYLYKIMSLLNLDLKNESLKDTPIRISKMYVNEIFSGLD YKNFPKIMLMDNKIKFHEMIIVRDILLISTCEHHFITINGQATIAYIPENKIIGLSKINRIAQFFAKRPQIQERLTKQIL LVLQVLLQTKNVAIIIHMDHFCVKARGVCDTSSSTVTSCLDGLFKSDKNIREEFFFKK
Sequences:
>Translated_218_residues MIKITKEANIARNVLLLKGLENPILKEYNDIKEKERELLIAEYLYKIMSLLNLDLKNESLKDTPIRISKMYVNEIFSGLD YKNFPKIMLMDNKIKFHEMIIVRDILLISTCEHHFITINGQATIAYIPENKIIGLSKINRIAQFFAKRPQIQERLTKQIL LVLQVLLQTKNVAIIIHMDHFCVKARGVCDTSSSTVTSCLDGLFKSDKNIREEFFFKK >Mature_218_residues MIKITKEANIARNVLLLKGLENPILKEYNDIKEKERELLIAEYLYKIMSLLNLDLKNESLKDTPIRISKMYVNEIFSGLD YKNFPKIMLMDNKIKFHEMIIVRDILLISTCEHHFITINGQATIAYIPENKIIGLSKINRIAQFFAKRPQIQERLTKQIL LVLQVLLQTKNVAIIIHMDHFCVKARGVCDTSSSTVTSCLDGLFKSDKNIREEFFFKK
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=216, Percent_Identity=34.2592592592593, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI4503949, Length=216, Percent_Identity=34.2592592592593, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI66932972, Length=172, Percent_Identity=32.5581395348837, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI66932970, Length=172, Percent_Identity=32.5581395348837, Blast_Score=82, Evalue=3e-16, Organism=Escherichia coli, GI1788476, Length=215, Percent_Identity=58.1395348837209, Blast_Score=262, Evalue=2e-71, Organism=Caenorhabditis elegans, GI17560486, Length=118, Percent_Identity=46.6101694915254, Blast_Score=124, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6321706, Length=183, Percent_Identity=40.9836065573771, Blast_Score=135, Evalue=4e-33, Organism=Drosophila melanogaster, GI24656782, Length=118, Percent_Identity=45.7627118644068, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24656791, Length=118, Percent_Identity=45.7627118644068, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24656796, Length=118, Percent_Identity=45.7627118644068, Blast_Score=112, Evalue=2e-25,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_BUCAP (Q8KA05)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660486.1 - ProteinModelPortal: Q8KA05 - SMR: Q8KA05 - EnsemblBacteria: EBBUCT00000000357 - GeneID: 1005946 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg129 - HOGENOM: HBG370191 - OMA: MYVEEIF - ProtClustDB: PRK09347 - BioCyc: BAPH198804:BUSG129-MONOMER - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 - TIGRFAMs: TIGR00063
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 25363; Mature: 25363
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKITKEANIARNVLLLKGLENPILKEYNDIKEKERELLIAEYLYKIMSLLNLDLKNESL CEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KDTPIRISKMYVNEIFSGLDYKNFPKIMLMDNKIKFHEMIIVRDILLISTCEHHFITING CCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC QATIAYIPENKIIGLSKINRIAQFFAKRPQIQERLTKQILLVLQVLLQTKNVAIIIHMDH CEEEEECCCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC FCVKARGVCDTSSSTVTSCLDGLFKSDKNIREEFFFKK HHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCC >Mature Secondary Structure MIKITKEANIARNVLLLKGLENPILKEYNDIKEKERELLIAEYLYKIMSLLNLDLKNESL CEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KDTPIRISKMYVNEIFSGLDYKNFPKIMLMDNKIKFHEMIIVRDILLISTCEHHFITING CCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC QATIAYIPENKIIGLSKINRIAQFFAKRPQIQERLTKQILLVLQVLLQTKNVAIIIHMDH CEEEEECCCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC FCVKARGVCDTSSSTVTSCLDGLFKSDKNIREEFFFKK HHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438