Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
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Accession | NC_004061 |
Length | 641,454 |
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The map label for this gene is tal
Identifier: 21672377
GI number: 21672377
Start: 96082
End: 97032
Strand: Direct
Name: tal
Synonym: BUsg085
Alternate gene names: 21672377
Gene position: 96082-97032 (Clockwise)
Preceding gene: 21672376
Following gene: 21672378
Centisome position: 14.98
GC content: 27.97
Gene sequence:
>951_bases ATGAATCAACTAAATGCGTTAAAACAATTTACGACAATTGTTGCAGATACAAGTGATATAGAGTCGATTTGTAAATATAA ACCACAAGATGCAACTACTAATCCATCTTTAATACTTAAAGCTGTCAGTTCAAGTGTTAACAAAAGATTTATTGATCAAG CAATAGAATATGCTAGAAAAAAAGGTGGTTCTTACAATTATAAGATAGTAAATGCTAGTGATAAAATTTTAGTTGATCTT GGAGTAGAAATTTTAAAACATATACCAGGTTATATTTCTAGTGAAGTTGATGCTCGTTTGTCTTTTAATAAAGAAAAATG TATTTTAAAAGCAAAAAAAATAATTGATATGTATGAAGAAAAAGGTATTTCTAGAAATAGAGTATTAATTAAACTAGCGG CTACTTGGGAATGCATAAAAGCAGCAGAAGAGCTTAAAAAAAATAATATTGCTTGTAATTTAACTCTTTTATTTTCTTTT GCTCAAGCTCGTGCTTGTGCAGAATCAAATGTATTTTTAATATCTCCCTTTGTTGGCCGTATTTACGATTGGTATCTATC TCAAAATTTAATATTAAAAAATCCTGCTGATCAGGATCCAGGTGTCTTATCTGTTTGTAAAATTTATGATTTTTATAAAA AATATAATTACAAAACTATAATTATGGGCGCAAGTTTTCGTAATGTTCAACAAATTTTATCTCTTTCAGGATGCGATCGA TTGACTATTTCACCTGTATTATTAAAAGAGTTGGAATCTAGTAATAAAGAATTAAATAGAAAATTATGTCCTCCTACTTC ATTTTTAAATCCACCTGTGCCTCTTACTGAAGCGGAATTTAGATGGGAACATAATCAGGATGAAATGGCTGTTCAAAAAT TATCAGAAGGTATAAGAAATTTTGGAAAAGATCAATTAAGTTTGGAGAAAATTTTTTCTAAACTAATATAA
Upstream 100 bases:
>100_bases TATTTAATATTGTTAAGTAAAATACGTTTTTTTTACATATAATTTTAATCTTTGATTTGCTAATTTTATTTCTTAATTTT TTAATAAAAAGGACAAAACA
Downstream 100 bases:
>100_bases ATGTTGAATAAGATATTAATTTTTTTAAGTATAAATTTGGAGAAATATTTATGTGTGTAAGAAGAGAATTAGCAAACGCA ATTCGTATGTTGAGTATAGA
Product: transaldolase B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MNQLNALKQFTTIVADTSDIESICKYKPQDATTNPSLILKAVSSSVNKRFIDQAIEYARKKGGSYNYKIVNASDKILVDL GVEILKHIPGYISSEVDARLSFNKEKCILKAKKIIDMYEEKGISRNRVLIKLAATWECIKAAEELKKNNIACNLTLLFSF AQARACAESNVFLISPFVGRIYDWYLSQNLILKNPADQDPGVLSVCKIYDFYKKYNYKTIIMGASFRNVQQILSLSGCDR LTISPVLLKELESSNKELNRKLCPPTSFLNPPVPLTEAEFRWEHNQDEMAVQKLSEGIRNFGKDQLSLEKIFSKLI
Sequences:
>Translated_316_residues MNQLNALKQFTTIVADTSDIESICKYKPQDATTNPSLILKAVSSSVNKRFIDQAIEYARKKGGSYNYKIVNASDKILVDL GVEILKHIPGYISSEVDARLSFNKEKCILKAKKIIDMYEEKGISRNRVLIKLAATWECIKAAEELKKNNIACNLTLLFSF AQARACAESNVFLISPFVGRIYDWYLSQNLILKNPADQDPGVLSVCKIYDFYKKYNYKTIIMGASFRNVQQILSLSGCDR LTISPVLLKELESSNKELNRKLCPPTSFLNPPVPLTEAEFRWEHNQDEMAVQKLSEGIRNFGKDQLSLEKIFSKLI >Mature_316_residues MNQLNALKQFTTIVADTSDIESICKYKPQDATTNPSLILKAVSSSVNKRFIDQAIEYARKKGGSYNYKIVNASDKILVDL GVEILKHIPGYISSEVDARLSFNKEKCILKAKKIIDMYEEKGISRNRVLIKLAATWECIKAAEELKKNNIACNLTLLFSF AQARACAESNVFLISPFVGRIYDWYLSQNLILKNPADQDPGVLSVCKIYDFYKKYNYKTIIMGASFRNVQQILSLSGCDR LTISPVLLKELESSNKELNRKLCPPTSFLNPPVPLTEAEFRWEHNQDEMAVQKLSEGIRNFGKDQLSLEKIFSKLI
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 1 subfamily
Homologues:
Organism=Homo sapiens, GI5803187, Length=314, Percent_Identity=53.5031847133758, Blast_Score=342, Evalue=4e-94, Organism=Escherichia coli, GI1788807, Length=313, Percent_Identity=59.4249201277955, Blast_Score=400, Evalue=1e-113, Organism=Escherichia coli, GI1786189, Length=315, Percent_Identity=54.6031746031746, Blast_Score=365, Evalue=1e-102, Organism=Caenorhabditis elegans, GI25153750, Length=319, Percent_Identity=49.2163009404389, Blast_Score=301, Evalue=2e-82, Organism=Caenorhabditis elegans, GI25153752, Length=165, Percent_Identity=51.5151515151515, Blast_Score=164, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17570473, Length=97, Percent_Identity=46.3917525773196, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321480, Length=315, Percent_Identity=50.4761904761905, Blast_Score=296, Evalue=2e-81, Organism=Saccharomyces cerevisiae, GI6323386, Length=321, Percent_Identity=50.4672897196262, Blast_Score=287, Evalue=2e-78, Organism=Drosophila melanogaster, GI45549185, Length=315, Percent_Identity=52.6984126984127, Blast_Score=325, Evalue=3e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TAL_BUCAP (Q8KA27)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660444.1 - ProteinModelPortal: Q8KA27 - SMR: Q8KA27 - EnsemblBacteria: EBBUCT00000000340 - GeneID: 1005902 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg085 - GeneTree: EBGT00050000007734 - HOGENOM: HBG286747 - OMA: LINASDR - ProtClustDB: PRK05269 - BioCyc: BAPH198804:BUSG085-MONOMER - GO: GO:0005737 - HAMAP: MF_00492 - InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004730 - InterPro: IPR018225 - Gene3D: G3DSA:3.20.20.70 - PANTHER: PTHR10683 - PANTHER: PTHR10683:SF3 - TIGRFAMs: TIGR00874
Pfam domain/function: PF00923 Transaldolase
EC number: =2.2.1.2
Molecular weight: Translated: 35826; Mature: 35826
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2
Important sites: ACT_SITE 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLNALKQFTTIVADTSDIESICKYKPQDATTNPSLILKAVSSSVNKRFIDQAIEYARK CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KGGSYNYKIVNASDKILVDLGVEILKHIPGYISSEVDARLSFNKEKCILKAKKIIDMYEE CCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHCCCCHHHHCCCHHHHHHHHHHHHHHHHH KGISRNRVLIKLAATWECIKAAEELKKNNIACNLTLLFSFAQARACAESNVFLISPFVGR CCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEEECHHHHH IYDWYLSQNLILKNPADQDPGVLSVCKIYDFYKKYNYKTIIMGASFRNVQQILSLSGCDR HHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCC LTISPVLLKELESSNKELNRKLCPPTSFLNPPVPLTEAEFRWEHNQDEMAVQKLSEGIRN CEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHH FGKDQLSLEKIFSKLI HCCHHHHHHHHHHHCC >Mature Secondary Structure MNQLNALKQFTTIVADTSDIESICKYKPQDATTNPSLILKAVSSSVNKRFIDQAIEYARK CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KGGSYNYKIVNASDKILVDLGVEILKHIPGYISSEVDARLSFNKEKCILKAKKIIDMYEE CCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHCCCCHHHHCCCHHHHHHHHHHHHHHHHH KGISRNRVLIKLAATWECIKAAEELKKNNIACNLTLLFSFAQARACAESNVFLISPFVGR CCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEEECHHHHH IYDWYLSQNLILKNPADQDPGVLSVCKIYDFYKKYNYKTIIMGASFRNVQQILSLSGCDR HHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCC LTISPVLLKELESSNKELNRKLCPPTSFLNPPVPLTEAEFRWEHNQDEMAVQKLSEGIRN CEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHH FGKDQLSLEKIFSKLI HCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438