Click here to switch to the map view.

The map label for this gene is yigL [C]

Identifier: 21672322

GI number: 21672322

Start: 29642

End: 30466

Strand: Direct

Name: yigL [C]

Synonym: BUsg029

Alternate gene names: 21672322

Gene position: 29642-30466 (Clockwise)

Preceding gene: 21672319

Following gene: 21672324

Centisome position: 4.62

GC content: 24.97

Gene sequence:

>825_bases
ATGTATCGAATTATTGCAGCAGATTTAGATGGCACTTTACTTTCACCAGAAAATAAAATAACAAAATATACTGAAAAAAT
CATAAAATTTTTAATAGAAAAAGGTTTTTATTTTGTTTTTGCTTCAGGTCGTCACTATATTGATATAATGAAAATTAGAG
ATACTTTGAATATAAAAGTTTTTATGATTACCTCTAATGGAGCTCAAGTTTACGATTTAAATAATGTATTAATTTTTGAA
AACCACTTAGATGAAGAGATTGCTTTAAAATTATGCAAAATGAAATACTTAGATGCAGATATTATCACTCAAGTATATCG
TAATAATCAATGGTATATAAATAATAATAAGATAGATAATAATTTTTGCCCTACCTTATCGTCATTAAGGTATAAGTATT
TTTGTCCTGATGTGTTTAACTTTAAGAAAGTCAGTAAGGTTTTTTTTACAAGTCATAATTTAAAAAAATTACATACTCTT
CAAAAAGACATTATTTCTTTTTTAGGAAATCGAGTTAATGTTCATTTTTCTGTACCAGGTTGTCTAGAAGTTGTATCTGG
TGAAGTTTCGAAAGGATATGGATTAAAGTTAATATCTAATATTCTTGGTATTTCTTTAAAAGAATGTATTACTTTTGGAG
ATGGTATGAATGATCAAGATATGCTTAGTATTTCTGGAAAAGCATGCATTATGGAGAATGCAGATTCGTCTTTAAAAAAG
AATTTGCCATATGCTGAGGTTATTGGAAGCAATAAAAATGATGGTGTTGCAGTTTTTTTAAATAAAAATTTTATAAAAAA
TAATAAATTTATTAAATGTTTTTAA

Upstream 100 bases:

>100_bases
TTCAGTCATTAATTTTTACAAAATTTTAAATTATTTTTATATTTTTTATGATATATTTTCATATATTAAATATATATTTT
TTATTAAGGTTTTAATTTTT

Downstream 100 bases:

>100_bases
CGTTTTTAAAAAAATGCGGTTTTTGTGTATCACGAATGAATTTTAAATGAGTACAAACATGTAAACGTATAGCATAAATA
AAATTTTTTATTATTAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MYRIIAADLDGTLLSPENKITKYTEKIIKFLIEKGFYFVFASGRHYIDIMKIRDTLNIKVFMITSNGAQVYDLNNVLIFE
NHLDEEIALKLCKMKYLDADIITQVYRNNQWYINNNKIDNNFCPTLSSLRYKYFCPDVFNFKKVSKVFFTSHNLKKLHTL
QKDIISFLGNRVNVHFSVPGCLEVVSGEVSKGYGLKLISNILGISLKECITFGDGMNDQDMLSISGKACIMENADSSLKK
NLPYAEVIGSNKNDGVAVFLNKNFIKNNKFIKCF

Sequences:

>Translated_274_residues
MYRIIAADLDGTLLSPENKITKYTEKIIKFLIEKGFYFVFASGRHYIDIMKIRDTLNIKVFMITSNGAQVYDLNNVLIFE
NHLDEEIALKLCKMKYLDADIITQVYRNNQWYINNNKIDNNFCPTLSSLRYKYFCPDVFNFKKVSKVFFTSHNLKKLHTL
QKDIISFLGNRVNVHFSVPGCLEVVSGEVSKGYGLKLISNILGISLKECITFGDGMNDQDMLSISGKACIMENADSSLKK
NLPYAEVIGSNKNDGVAVFLNKNFIKNNKFIKCF
>Mature_274_residues
MYRIIAADLDGTLLSPENKITKYTEKIIKFLIEKGFYFVFASGRHYIDIMKIRDTLNIKVFMITSNGAQVYDLNNVLIFE
NHLDEEIALKLCKMKYLDADIITQVYRNNQWYINNNKIDNNFCPTLSSLRYKYFCPDVFNFKKVSKVFFTSHNLKKLHTL
QKDIISFLGNRVNVHFSVPGCLEVVSGEVSKGYGLKLISNILGISLKECITFGDGMNDQDMLSISGKACIMENADSSLKK
NLPYAEVIGSNKNDGVAVFLNKNFIKNNKFIKCF

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family

Homologues:

Organism=Escherichia coli, GI48994981, Length=265, Percent_Identity=45.6603773584906, Blast_Score=248, Evalue=3e-67,
Organism=Escherichia coli, GI87081741, Length=267, Percent_Identity=30.7116104868914, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI1786982, Length=278, Percent_Identity=26.2589928057554, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87081790, Length=268, Percent_Identity=25.3731343283582, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y029_BUCAP (Q8KA73)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660389.1
- ProteinModelPortal:   Q8KA73
- EnsemblBacteria:   EBBUCT00000000182
- GeneID:   1005845
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg029
- GeneTree:   EBGT00050000008091
- HOGENOM:   HBG728500
- ProtClustDB:   CLSK384203
- BioCyc:   BAPH198804:BUSG029-MONOMER
- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150
- Gene3D:   G3DSA:3.40.50.1000
- TIGRFAMs:   TIGR00099
- TIGRFAMs:   TIGR01484

Pfam domain/function: PF08282 Hydrolase_3; SSF56784 SSF56784

EC number: NA

Molecular weight: Translated: 31349; Mature: 31349

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS01228 COF_1; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRIIAADLDGTLLSPENKITKYTEKIIKFLIEKGFYFVFASGRHYIDIMKIRDTLNIKV
CEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCEEEE
FMITSNGAQVYDLNNVLIFENHLDEEIALKLCKMKYLDADIITQVYRNNQWYINNNKIDN
EEEECCCCEEEECCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCCCC
NFCPTLSSLRYKYFCPDVFNFKKVSKVFFTSHNLKKLHTLQKDIISFLGNRVNVHFSVPG
CCCCCHHHCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCH
CLEVVSGEVSKGYGLKLISNILGISLKECITFGDGMNDQDMLSISGKACIMENADSSLKK
HHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCEEEECCCEEEEECCCHHHHH
NLPYAEVIGSNKNDGVAVFLNKNFIKNNKFIKCF
CCCHHHHHCCCCCCCEEEEEECCEECCCCEEEEC
>Mature Secondary Structure
MYRIIAADLDGTLLSPENKITKYTEKIIKFLIEKGFYFVFASGRHYIDIMKIRDTLNIKV
CEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCEEEE
FMITSNGAQVYDLNNVLIFENHLDEEIALKLCKMKYLDADIITQVYRNNQWYINNNKIDN
EEEECCCCEEEECCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCCCC
NFCPTLSSLRYKYFCPDVFNFKKVSKVFFTSHNLKKLHTLQKDIISFLGNRVNVHFSVPG
CCCCCHHHCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCH
CLEVVSGEVSKGYGLKLISNILGISLKECITFGDGMNDQDMLSISGKACIMENADSSLKK
HHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCEEEECCCEEEEECCCHHHHH
NLPYAEVIGSNKNDGVAVFLNKNFIKNNKFIKCF
CCCHHHHHCCCCCCCEEEEEECCEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438