Click here to switch to the map view.

The map label for this gene is yidD [C]

Identifier: 21672309

GI number: 21672309

Start: 14660

End: 14917

Strand: Direct

Name: yidD [C]

Synonym: BUsg015

Alternate gene names: 21672309

Gene position: 14660-14917 (Clockwise)

Preceding gene: 21672308

Following gene: 21672310

Centisome position: 2.29

GC content: 25.19

Gene sequence:

>258_bases
ATGGTCAAACTATCAACGATAGTTGTTTTTTGTTTAACTTTTTTCGTTTCGATTTATCAAAATTATATTAGTTTTTTTAT
GCCTTCAAATTGTCGTTTTTATCCTACTTGCTCAACATATATGATTTTATCTTTGCGTAAATTTGGAGTTATCAAAGGTA
TAATTTTAACAATTTTACGTTTATTTAAATGTCATCCATTGCATCAAGGTGGAGAAGATTTAGTGCCTTTAAAAATTAAA
GATAAAAGTGAATATTAA

Upstream 100 bases:

>100_bases
TATTACAACATAGATTAATCTCAATGGATTTCGTTGTTATAGCAAAGAAAAATATTGTTTATTTAAATAATAAAAAAATA
GTAAATATATTGGAGTATAT

Downstream 100 bases:

>100_bases
TGATGGAATTACAGCGTAATTTTTTTATTTTTGCTTTTTTGTTTGTTTCTTTTTTATTATGGCAAGCATGGCAGAGTCAA
TCTTTAAAAAAAAATAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MVKLSTIVVFCLTFFVSIYQNYISFFMPSNCRFYPTCSTYMILSLRKFGVIKGIILTILRLFKCHPLHQGGEDLVPLKIK
DKSEY

Sequences:

>Translated_85_residues
MVKLSTIVVFCLTFFVSIYQNYISFFMPSNCRFYPTCSTYMILSLRKFGVIKGIILTILRLFKCHPLHQGGEDLVPLKIK
DKSEY
>Mature_85_residues
MVKLSTIVVFCLTFFVSIYQNYISFFMPSNCRFYPTCSTYMILSLRKFGVIKGIILTILRLFKCHPLHQGGEDLVPLKIK
DKSEY

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=74, Percent_Identity=51.3513513513513, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y015_BUCAP (P29432)

Other databases:

- EMBL:   M80817
- EMBL:   AF008210
- EMBL:   AE013218
- PIR:   JC1156
- RefSeq:   NP_660376.1
- EnsemblBacteria:   EBBUCT00000000037
- GeneID:   1005831
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg015
- GeneTree:   EBGT00050000008209
- HOGENOM:   HBG634291
- OMA:   CSEYAIE
- ProtClustDB:   CLSK316602
- BioCyc:   BAPH198804:BUSG015-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 9907; Mature: 9907

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLSTIVVFCLTFFVSIYQNYISFFMPSNCRFYPTCSTYMILSLRKFGVIKGIILTILR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LFKCHPLHQGGEDLVPLKIKDKSEY
HHHCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MVKLSTIVVFCLTFFVSIYQNYISFFMPSNCRFYPTCSTYMILSLRKFGVIKGIILTILR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LFKCHPLHQGGEDLVPLKIKDKSEY
HHHCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1572539; 9516544; 12089438