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The map label for this gene is nrdD [H]

Identifier: 30263550

GI number: 30263550

Start: 3370425

End: 3372281

Strand: Reverse

Name: nrdD [H]

Synonym: BA_3663

Alternate gene names: 30263550

Gene position: 3372281-3370425 (Counterclockwise)

Preceding gene: 30263553

Following gene: 30263549

Centisome position: 64.51

GC content: 37.16

Gene sequence:

>1857_bases
ATGTTACAAAAAAATACACGTGGAGAAGGATTAATGAGAGTGTTTGAGACGATTGTCCACGGCAATGAACAAGATTTAAT
GCAAGAAAATGCAAATGTAGATGGCCGCTCTCCGATGGGCGTAATGGGAACGTTCGCATCTGAGAGTGCGAAATATTATG
CTGTGGAAAAATTATTGTCAGATCAAGTGAAAAAAGCGATAAATGAAAATATATTATATCCACATGATTTAGATTTTTAT
GCGACAGGAACGACGACTTGTTCACAAATTCCGTTAGCGCAAATGCTTGCGAACGGTTTTCATACCGGACATGGACATAT
GAGACAACCGCAAGACATTAAAAGTGCATTAGCTCTTTCATCTATTATTTTTCAAGCGAATCAAAATATGCAGCACGGTG
GTCAATCGTTTGCACTCTTTGATGTTGATTTAGCTCCATATGTGAGAAAAACAGTAGAGAGACATAAGAAACGATTACAG
TCATATCCGCTTACGAAAGAACAAATAGAAGAATTTGCGTGGAAAGAAACAGAAAATGATACGTATCAGGCTTGTGAAGC
TTTCATTCATAATTCAAATAGTATGCATAGTCGGGGCGGAGGACAAGTACCGTTTATTTCTATTAATTATGGAACAGACA
CATCGAAAGAAGGAAGACTTTTAATTAAACAACTTTTAAAAGCAACACAAGCTGGTCTTGGTAAAGGGGAAACACCAATT
TTTCCTATTCAAATTTTTAAAATGAAAAAAGGTGTGAACTTTGAAGGAAGTGATCCGAACTATGATTTATTTGAATTAGC
GTTAGAGACAACGGCTGAACGATTATTCCCTAACTTTTCATTTTTAGATGCGCCATTTAATGCTGTGCATTATGATGGAC
GACCGGAAAGTGAAGTATGTTACATGGGATGTCGTACTCGTGTTATGTCGAACATACATGGAGAAGAAACGGCGATTGGA
AGAGGGAATTTATCATTTACATCTATTAATTTAGTCAAATTAGCATTAATTAGTGGTTCAAAAGAAGCGTTTTATGAAGC
GTTAAATTATTATTTAGATTTAGGAATTAAGCAATTATTAGAGCGATTTGAGTATCAATGTACGAAGCGAGCAAGAGATT
TCCGATTTTTATATTCACAAGGTGTATGGCGCGGTGGAGAAAAGTTACAGCCTGAAGATTCTGTAGCATCCATTTTAAAG
CAAGGGACGTTAAGTCTTGGTTTTATCGGCCTTGCGGAGTGTTTAGTAGCTTTAACAGGAAAGCATCATGGAGAAGATGA
AGAATCATGGAAACTCGGGTATGAAATTATTTCCTTTATGAGGGATAGAATGGATAAAGCGACAGAAGAACATGAACTGA
ATTTCTCGGTAATTGCAACTCCAGCAGAAGGATTATCAGGGAAGTTTGTGAAAAAAGATAGAGAAGAATTTGGCGTGATT
AGCGGTATAACAAATCATAATTACTATACGAATTCATTCCATATTCCAGTTTATTATAACATGCAAGCGATAAATAAAAT
TCGTTTAGAAGGCCCGTTCCACGCTCTATGTAACGGGGGACATATTACGTATATTGAACTAGATGGAGCAGCAATGCATA
ACAAAAAGGCATTAAAACAAATTGTGCAAGCGATGGCAGAACATGGCGTTGGATACGGTTCAATTAATCATCCTGTTGAC
CGTTGTAAGTGCTGTAGTTATCACGGGGTTATTGGAAATGAATGTCCGAGCTGCGGAAATGAAGATGAGGCTAATATAGA
AAGAATTCGCCGTATAACAGGTTATCTTGTAGGAGATATGTCGAAGTGGAATAGTGCGAAACGTAGTGAAGAGATGGATC
GGGTGAAACATAAATGA

Upstream 100 bases:

>100_bases
AAAAATTTCACAGGAATGTTACATTTCTCACAGAAACAATAAGACTATATGTAGTAACATTTTAATCAAAAGACAACAAC
ATATTGGTGGAGGGTTATAA

Downstream 100 bases:

>100_bases
AAGTGATGAACATTATTCATGATAGTGTAGTAGATGGAGAAGGGTTGCGGACAGTCGTGTTTTTTGCGGGCTGTCCGCAT
CGTTGTTTCGGTTGCCATAA

Product: anaerobic ribonucleoside triphosphate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MLQKNTRGEGLMRVFETIVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVEKLLSDQVKKAINENILYPHDLDFY
ATGTTTCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALSSIIFQANQNMQHGGQSFALFDVDLAPYVRKTVERHKKRLQ
SYPLTKEQIEEFAWKETENDTYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLIKQLLKATQAGLGKGETPI
FPIQIFKMKKGVNFEGSDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVCYMGCRTRVMSNIHGEETAIG
RGNLSFTSINLVKLALISGSKEAFYEALNYYLDLGIKQLLERFEYQCTKRARDFRFLYSQGVWRGGEKLQPEDSVASILK
QGTLSLGFIGLAECLVALTGKHHGEDEESWKLGYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGVI
SGITNHNYYTNSFHIPVYYNMQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALKQIVQAMAEHGVGYGSINHPVD
RCKCCSYHGVIGNECPSCGNEDEANIERIRRITGYLVGDMSKWNSAKRSEEMDRVKHK

Sequences:

>Translated_618_residues
MLQKNTRGEGLMRVFETIVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVEKLLSDQVKKAINENILYPHDLDFY
ATGTTTCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALSSIIFQANQNMQHGGQSFALFDVDLAPYVRKTVERHKKRLQ
SYPLTKEQIEEFAWKETENDTYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLIKQLLKATQAGLGKGETPI
FPIQIFKMKKGVNFEGSDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVCYMGCRTRVMSNIHGEETAIG
RGNLSFTSINLVKLALISGSKEAFYEALNYYLDLGIKQLLERFEYQCTKRARDFRFLYSQGVWRGGEKLQPEDSVASILK
QGTLSLGFIGLAECLVALTGKHHGEDEESWKLGYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGVI
SGITNHNYYTNSFHIPVYYNMQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALKQIVQAMAEHGVGYGSINHPVD
RCKCCSYHGVIGNECPSCGNEDEANIERIRRITGYLVGDMSKWNSAKRSEEMDRVKHK
>Mature_618_residues
MLQKNTRGEGLMRVFETIVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVEKLLSDQVKKAINENILYPHDLDFY
ATGTTTCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALSSIIFQANQNMQHGGQSFALFDVDLAPYVRKTVERHKKRLQ
SYPLTKEQIEEFAWKETENDTYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLIKQLLKATQAGLGKGETPI
FPIQIFKMKKGVNFEGSDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVCYMGCRTRVMSNIHGEETAIG
RGNLSFTSINLVKLALISGSKEAFYEALNYYLDLGIKQLLERFEYQCTKRARDFRFLYSQGVWRGGEKLQPEDSVASILK
QGTLSLGFIGLAECLVALTGKHHGEDEESWKLGYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGVI
SGITNHNYYTNSFHIPVYYNMQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALKQIVQAMAEHGVGYGSINHPVD
RCKCCSYHGVIGNECPSCGNEDEANIERIRRITGYLVGDMSKWNSAKRSEEMDRVKHK

Specific function: Unknown

COG id: COG1328

COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glycine radical domain [H]

Homologues:

Organism=Escherichia coli, GI1790686, Length=630, Percent_Identity=33.3333333333333, Blast_Score=314, Evalue=9e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR001150
- InterPro:   IPR019777
- InterPro:   IPR012833 [H]

Pfam domain/function: PF03477 ATP-cone; PF01228 Gly_radical [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 69533; Mature: 69533

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKNTRGEGLMRVFETIVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVEKLLS
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHH
DQVKKAINENILYPHDLDFYATGTTTCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALS
HHHHHHHHCCCCCCCCCCEEECCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
SIIFQANQNMQHGGQSFALFDVDLAPYVRKTVERHKKRLQSYPLTKEQIEEFAWKETEND
HHHHHHCCCHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
TYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLIKQLLKATQAGLGKGETPI
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
FPIQIFKMKKGVNFEGSDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVC
EEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCCCHHH
YMGCRTRVMSNIHGEETAIGRGNLSFTSINLVKLALISGSKEAFYEALNYYLDLGIKQLL
HHHHHHHHHHHCCCCCCCCCCCCCEEEEHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
ERFEYQCTKRARDFRFLYSQGVWRGGEKLQPEDSVASILKQGTLSLGFIGLAECLVALTG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
KHHGEDEESWKLGYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGVI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCHH
SGITNHNYYTNSFHIPVYYNMQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALKQ
CCCCCCCEEECEEEEEEEECHHHHCEEEECCCHHHHCCCCEEEEEEECCCHHHHHHHHHH
IVQAMAEHGVGYGSINHPVDRCKCCSYHGVIGNECPSCGNEDEANIERIRRITGYLVGDM
HHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH
SKWNSAKRSEEMDRVKHK
HHHCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLQKNTRGEGLMRVFETIVHGNEQDLMQENANVDGRSPMGVMGTFASESAKYYAVEKLLS
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHH
DQVKKAINENILYPHDLDFYATGTTTCSQIPLAQMLANGFHTGHGHMRQPQDIKSALALS
HHHHHHHHCCCCCCCCCCEEECCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
SIIFQANQNMQHGGQSFALFDVDLAPYVRKTVERHKKRLQSYPLTKEQIEEFAWKETEND
HHHHHHCCCHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
TYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLIKQLLKATQAGLGKGETPI
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
FPIQIFKMKKGVNFEGSDPNYDLFELALETTAERLFPNFSFLDAPFNAVHYDGRPESEVC
EEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCCCHHH
YMGCRTRVMSNIHGEETAIGRGNLSFTSINLVKLALISGSKEAFYEALNYYLDLGIKQLL
HHHHHHHHHHHCCCCCCCCCCCCCEEEEHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
ERFEYQCTKRARDFRFLYSQGVWRGGEKLQPEDSVASILKQGTLSLGFIGLAECLVALTG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
KHHGEDEESWKLGYEIISFMRDRMDKATEEHELNFSVIATPAEGLSGKFVKKDREEFGVI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCHH
SGITNHNYYTNSFHIPVYYNMQAINKIRLEGPFHALCNGGHITYIELDGAAMHNKKALKQ
CCCCCCCEEECEEEEEEEECHHHHCEEEECCCHHHHCCCCEEEEEEECCCHHHHHHHHHH
IVQAMAEHGVGYGSINHPVDRCKCCSYHGVIGNECPSCGNEDEANIERIRRITGYLVGDM
HHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH
SKWNSAKRSEEMDRVKHK
HHHCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8421692; 7610040; 9278503; 8083158; 7852304 [H]