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The map label for this gene is yclJ [H]

Identifier: 30263549

GI number: 30263549

Start: 3369280

End: 3369957

Strand: Reverse

Name: yclJ [H]

Synonym: BA_3661

Alternate gene names: 30263549

Gene position: 3369957-3369280 (Counterclockwise)

Preceding gene: 30263550

Following gene: 30263548

Centisome position: 64.47

GC content: 34.51

Gene sequence:

>678_bases
ATGAATAAAACAGTATTACTTGTTGAAGATGAAAGAAGATTACGTGAAATTGTTAGTGATTATTTTCGTAATGAAGGCTT
TGAAGTAATCGAAGCAGAAGACGGAAAAAAAGCGCTAGAATTATTTGCAGAGCATGAAATTGATTTAATTATGTTAGATA
TTATGTTACCGGAAATAGATGGATGGTCTGTTTGTAGACGAATTAGAAAAGAATCAGCAGTACCAATTATTATGCTAACA
GCACGTTCGGATGAGGATGATACATTATTAGGATTTGAATTAGGTGCAGATGAATATGTAACGAAACCTTTCAGCCCGAA
AGTGTTAGTAGCTCGCGCGAAGACGTTATTGAAACGTGCGGATGGCGTGGTAGGAGTAGCAGAAGAAAATGCTATGTCTT
TAGCTGGAATAGAAGTGAATCGTCTATCTAGAACTGTTTTAGTAGATGGAGAAGAAATTATATTGACACATAAAGAATTT
GAACTTCTCGTTTATTTAATGGAGAACAAAGGAATTGTGTTGTCACGTCAACATTTATTAGATCAGTTATGGGGATATGA
CTATTACGGCGATGATCGAACGGTTGATACTCATATTAAAAAACTACGAAATAAGCTAGGAGATAAAGCAAAGCATATCG
GTACTGTTATTCGTGTTGGTTATAAATTTGAAGAATAA

Upstream 100 bases:

>100_bases
AGATTTGAAATCGGGAAAAAAGATTTAACACTTCCATTTCGCGGAAGCTCCAATCAACGTATTATTCGATTGAAAGAGTA
AAAAGGCGGGATAGATTATT

Downstream 100 bases:

>100_bases
CTCGGAACGTATTGTGTGCTTCACTCTAGGAAAATAACAATTTTATATCCTCTTTTGCAGGTAGAATGTACAAAAAATGC
TTTTTTTGTCTACAATGTTA

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MNKTVLLVEDERRLREIVSDYFRNEGFEVIEAEDGKKALELFAEHEIDLIMLDIMLPEIDGWSVCRRIRKESAVPIIMLT
ARSDEDDTLLGFELGADEYVTKPFSPKVLVARAKTLLKRADGVVGVAEENAMSLAGIEVNRLSRTVLVDGEEIILTHKEF
ELLVYLMENKGIVLSRQHLLDQLWGYDYYGDDRTVDTHIKKLRNKLGDKAKHIGTVIRVGYKFEE

Sequences:

>Translated_225_residues
MNKTVLLVEDERRLREIVSDYFRNEGFEVIEAEDGKKALELFAEHEIDLIMLDIMLPEIDGWSVCRRIRKESAVPIIMLT
ARSDEDDTLLGFELGADEYVTKPFSPKVLVARAKTLLKRADGVVGVAEENAMSLAGIEVNRLSRTVLVDGEEIILTHKEF
ELLVYLMENKGIVLSRQHLLDQLWGYDYYGDDRTVDTHIKKLRNKLGDKAKHIGTVIRVGYKFEE
>Mature_225_residues
MNKTVLLVEDERRLREIVSDYFRNEGFEVIEAEDGKKALELFAEHEIDLIMLDIMLPEIDGWSVCRRIRKESAVPIIMLT
ARSDEDDTLLGFELGADEYVTKPFSPKVLVARAKTLLKRADGVVGVAEENAMSLAGIEVNRLSRTVLVDGEEIILTHKEF
ELLVYLMENKGIVLSRQHLLDQLWGYDYYGDDRTVDTHIKKLRNKLGDKAKHIGTVIRVGYKFEE

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=39.4736842105263, Blast_Score=164, Evalue=5e-42,
Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=40.4444444444444, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=36.1233480176211, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=37.219730941704, Blast_Score=141, Evalue=3e-35,
Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=34.9344978165939, Blast_Score=141, Evalue=3e-35,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=34.841628959276, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1790860, Length=207, Percent_Identity=40.5797101449275, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1787229, Length=211, Percent_Identity=39.3364928909953, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=34.9775784753363, Blast_Score=130, Evalue=6e-32,
Organism=Escherichia coli, GI2367329, Length=214, Percent_Identity=39.7196261682243, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=31.8965517241379, Blast_Score=111, Evalue=3e-26,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=34.0807174887892, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=33.4862385321101, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=31.981981981982, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1788550, Length=101, Percent_Identity=36.6336633663366, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788191, Length=108, Percent_Identity=32.4074074074074, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790299, Length=101, Percent_Identity=29.7029702970297, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25767; Mature: 25767

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTVLLVEDERRLREIVSDYFRNEGFEVIEAEDGKKALELFAEHEIDLIMLDIMLPEID
CCCEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCC
GWSVCRRIRKESAVPIIMLTARSDEDDTLLGFELGADEYVTKPFSPKVLVARAKTLLKRA
CHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHC
DGVVGVAEENAMSLAGIEVNRLSRTVLVDGEEIILTHKEFELLVYLMENKGIVLSRQHLL
CCEEEEECCCCEEEECEEHHHCCEEEEECCCEEEEEECCEEEEEEEECCCCEEEEHHHHH
DQLWGYDYYGDDRTVDTHIKKLRNKLGDKAKHIGTVIRVGYKFEE
HHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHEEEEEECC
>Mature Secondary Structure
MNKTVLLVEDERRLREIVSDYFRNEGFEVIEAEDGKKALELFAEHEIDLIMLDIMLPEID
CCCEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCC
GWSVCRRIRKESAVPIIMLTARSDEDDTLLGFELGADEYVTKPFSPKVLVARAKTLLKRA
CHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHC
DGVVGVAEENAMSLAGIEVNRLSRTVLVDGEEIILTHKEFELLVYLMENKGIVLSRQHLL
CCEEEEECCCCEEEECEEHHHCCEEEEECCCEEEEEECCEEEEEEEECCCCEEEEHHHHH
DQLWGYDYYGDDRTVDTHIKKLRNKLGDKAKHIGTVIRVGYKFEE
HHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]