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The map label for this gene is yyxA [H]

Identifier: 30263548

GI number: 30263548

Start: 3367836

End: 3369077

Strand: Reverse

Name: yyxA [H]

Synonym: BA_3660

Alternate gene names: 30263548

Gene position: 3369077-3367836 (Counterclockwise)

Preceding gene: 30263549

Following gene: 30263547

Centisome position: 64.45

GC content: 37.04

Gene sequence:

>1242_bases
ATGGGATATTACGACGGACCAAATTTAAATGAAGAGCATAGTGAAACGAGAGAAGTGAGAAAATCGGGCAGTAAAAAAGG
CTATTTTTTCACAGGTTTAGTCGGAGCTGTAGTTGGGGCTGTTTCAATTAGTTTTGCGGCACCATATATGCCATGGGCTC
AAAATAATGGAGCGACTGTATCATCTTTTAGTTCAGATTCAAAAGTTGAAGGTACTGTAGTTCCTGTTGTCAATAAAGCA
AAAAATGAAACGGATTTACCTGGTATGATTGAAGGCGCGAAAGATGTTGTTGTAGGTGTTATTAACATGCAACAAAGCAT
TGATCCATTTGCAATGCAACCGACAGGTCAAGAGCAACAAGCTGGTTCAGGATCAGGTGTTATTTATAAAAAGGCAGGAA
ATAAAGCATATATTGTAACGAACAATCATGTAGTAGATGGTGCAAATAAACTTGCTGTAAAACTGAGTGATGGCAAGAAG
GTAGATGCAAAGCTTGTAGGGAAAGACCCTTGGTTAGATTTAGCTGTTGTTGAAATTGATGGTGCTAATGTTAATAAAGT
TGCCACTTTAGGTGATTCTAGTAAAATCCGTGCGGGTGAAAAAGCAATTGCAATCGGTAACCCATTAGGATTTGACGGAA
GTGTAACGGAAGGTATTATTAGTAGTAAAGAACGTGAAATTCCAGTAGATATCGATGGCGATAAGCGTGCAGATTGGAAT
GCTCAAGTTATTCAAACAGATGCAGCAATTAACCCTGGGAACAGTGGTGGTGCGTTATTTAACCAAAACGGAGAAATAAT
TGGGATTAATTCAAGTAAAATTGCACAACAAGAAGTTGAAGGAATTGGATTTGCTATTCCAATTAATATCGCAAAACCAG
TTATTGAATCACTTGAAAAAGACGGAGTAGTGAAACGTCCAGCTCTTGGAGTAGGTGTCGTTTCATTAGAAGATGTGCAA
GCTTATGCAGTAAATCAATTGAAAGTGCCAAAAGAAGTAACAAACGGTGTTGTATTAGGTAAAATTTACCCAATATCACC
TGCAGAAAAAGCTGGTTTAGAGCAATATGATATTGTAGTAGCATTAGATAATCAAAAAGTAGAAAACTCACTTCAATTCC
GTAAATATTTATATGAGAAGAAAAAAGTAGGCGAGAAAGTGGAAGTTACATTCTACCGTAACGGTCAAAAAATGACGAAA
ACAGCTACTTTAGCAGATAACTCAGCTACAAAGAATCAATAA

Upstream 100 bases:

>100_bases
TAAGCGTATTTTTTTAATTGGATTTCACGATGAGTTCACAAGAAGGACACAAAACGTGACTATACTGAAAATACGAATTC
ACCAGAGAGGGGAAGTAAAC

Downstream 100 bases:

>100_bases
TCGGAATAAAAGAAAGTCTCTTTCATATTGAAAGAGACTTTCTTTATCGGCTATACTAAAGGAATAGGAGGGATTAATTA
TGACAATTGAAAACCCAACT

Product: serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MGYYDGPNLNEEHSETREVRKSGSKKGYFFTGLVGAVVGAVSISFAAPYMPWAQNNGATVSSFSSDSKVEGTVVPVVNKA
KNETDLPGMIEGAKDVVVGVINMQQSIDPFAMQPTGQEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLSDGKK
VDAKLVGKDPWLDLAVVEIDGANVNKVATLGDSSKIRAGEKAIAIGNPLGFDGSVTEGIISSKEREIPVDIDGDKRADWN
AQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIAKPVIESLEKDGVVKRPALGVGVVSLEDVQ
AYAVNQLKVPKEVTNGVVLGKIYPISPAEKAGLEQYDIVVALDNQKVENSLQFRKYLYEKKKVGEKVEVTFYRNGQKMTK
TATLADNSATKNQ

Sequences:

>Translated_413_residues
MGYYDGPNLNEEHSETREVRKSGSKKGYFFTGLVGAVVGAVSISFAAPYMPWAQNNGATVSSFSSDSKVEGTVVPVVNKA
KNETDLPGMIEGAKDVVVGVINMQQSIDPFAMQPTGQEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLSDGKK
VDAKLVGKDPWLDLAVVEIDGANVNKVATLGDSSKIRAGEKAIAIGNPLGFDGSVTEGIISSKEREIPVDIDGDKRADWN
AQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIAKPVIESLEKDGVVKRPALGVGVVSLEDVQ
AYAVNQLKVPKEVTNGVVLGKIYPISPAEKAGLEQYDIVVALDNQKVENSLQFRKYLYEKKKVGEKVEVTFYRNGQKMTK
TATLADNSATKNQ
>Mature_412_residues
GYYDGPNLNEEHSETREVRKSGSKKGYFFTGLVGAVVGAVSISFAAPYMPWAQNNGATVSSFSSDSKVEGTVVPVVNKAK
NETDLPGMIEGAKDVVVGVINMQQSIDPFAMQPTGQEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLSDGKKV
DAKLVGKDPWLDLAVVEIDGANVNKVATLGDSSKIRAGEKAIAIGNPLGFDGSVTEGIISSKEREIPVDIDGDKRADWNA
QVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIAKPVIESLEKDGVVKRPALGVGVVSLEDVQA
YAVNQLKVPKEVTNGVVLGKIYPISPAEKAGLEQYDIVVALDNQKVENSLQFRKYLYEKKKVGEKVEVTFYRNGQKMTKT
ATLADNSATKNQ

Specific function: Serine Protease That Is Required At High Temperature. Involved In The Degradation Of Damaged Proteins. It Can Degrade Icia, Ada, Casein And Globin. Shared Specificity With Degq. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=283, Percent_Identity=34.6289752650177, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI7019477, Length=296, Percent_Identity=33.1081081081081, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI22129776, Length=291, Percent_Identity=30.5841924398625, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI24308541, Length=265, Percent_Identity=31.6981132075472, Blast_Score=111, Evalue=1e-24,
Organism=Escherichia coli, GI1786356, Length=286, Percent_Identity=38.8111888111888, Blast_Score=167, Evalue=9e-43,
Organism=Escherichia coli, GI1789629, Length=284, Percent_Identity=36.6197183098592, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1789630, Length=293, Percent_Identity=33.1058020477816, Blast_Score=148, Evalue=7e-37,
Organism=Drosophila melanogaster, GI24646839, Length=335, Percent_Identity=33.4328358208955, Blast_Score=134, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 43899; Mature: 43768

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYYDGPNLNEEHSETREVRKSGSKKGYFFTGLVGAVVGAVSISFAAPYMPWAQNNGATV
CCCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
SSFSSDSKVEGTVVPVVNKAKNETDLPGMIEGAKDVVVGVINMQQSIDPFAMQPTGQEQQ
EECCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCEEEEEEEEHHCCCCCEEECCCCCHHC
AGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLSDGKKVDAKLVGKDPWLDLAVVEID
CCCCCCEEEEECCCEEEEEECCEEECCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEC
GANVNKVATLGDSSKIRAGEKAIAIGNPLGFDGSVTEGIISSKEREIPVDIDGDKRADWN
CCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCEECCCCCCCCCC
AQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIAKPVIESLEK
CEEEEECCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHCCCEEEEHHHHHHHHHHHHH
DGVVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEKAGLEQYDIVV
CCCEECCCCCEEEEEEHHHHHHHHHHEECCHHHHCCEEEEEEECCCCHHHCCCCEEEEEE
ALDNQKVENSLQFRKYLYEKKKVGEKVEVTFYRNGQKMTKTATLADNSATKNQ
EECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
GYYDGPNLNEEHSETREVRKSGSKKGYFFTGLVGAVVGAVSISFAAPYMPWAQNNGATV
CCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
SSFSSDSKVEGTVVPVVNKAKNETDLPGMIEGAKDVVVGVINMQQSIDPFAMQPTGQEQQ
EECCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCEEEEEEEEHHCCCCCEEECCCCCHHC
AGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLSDGKKVDAKLVGKDPWLDLAVVEID
CCCCCCEEEEECCCEEEEEECCEEECCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEC
GANVNKVATLGDSSKIRAGEKAIAIGNPLGFDGSVTEGIISSKEREIPVDIDGDKRADWN
CCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCEECCCCCCCCCC
AQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIAKPVIESLEK
CEEEEECCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHCCCEEEEHHHHHHHHHHHHH
DGVVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEKAGLEQYDIVV
CCCEECCCCCEEEEEEHHHHHHHHHHEECCHHHHCCEEEEEEECCCCHHHCCCCEEEEEE
ALDNQKVENSLQFRKYLYEKKKVGEKVEVTFYRNGQKMTKTATLADNSATKNQ
EECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Serine endopeptidases [C]

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 8113162 [H]