Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 77748520
Identifier: 77748520
GI number: 77748520
Start: 312623
End: 313204
Strand: Direct
Name: 77748520
Synonym: XAC0261
Alternate gene names: NA
Gene position: 312623-313204 (Clockwise)
Preceding gene: 21241033
Following gene: 21241040
Centisome position: 6.04
GC content: 62.54
Gene sequence:
>582_bases ATGGTCGATCGCCTGGGCGCGCCGCCTGCCGAGGTCGTGGAGCGTGGGATAGGAGGTGTTGCCGCACGTATCACGCTGCC GCGTGCGGCCACCGGTGCCTTCGATGACCTGTTGTCACGCCGTGTGACCTGCCGCAATTTCGATAAGCAGCGCGCACTAT CGCGTGAGTTATTGGGCCACATGCTCGAACGTAGCGTCATGGCGAGTGCGCGTGTTGCGGTGGGGCACGACACCGCGTTT TTGAAAAAGCCGGTCCCTTCGGGAGGAAGCCTGCATCCCACTGAGACCTATTTGCTGATTCAGCGCGTCCAAGGCATGCC AAGCGGGCTGTATCACTACCGTCCAATCGAGCACGCGCTGCAGCCCGTGGCGCCGCCGCCTGAGCCGCTGTCGGATTTCG CACGTCGAGCGCTCTCCGGTCAGCACTGGTTTGCCGAAGCGCCGGTGCTGTTGATTCTGGCGCCACGCTTCTTGCGCAGC TTCTGGAAGTATCGAAACCACGCCAAGGCCTATCGCGCGATGATTCTCGATGTCGGCCATATTGCGCAGACGCTCTATCT GAGCGCCCGGACCTGGGGCTAG
Upstream 100 bases:
>100_bases TTGGTGGCCGTTGGCCGCGCTTTGGCATCGTTTTGCACGCTGGAAAGGCGAAGACAGCGTCGCGACAATGGAAGAACAAG GCCTGACAACCGCAGAGGGG
Downstream 100 bases:
>100_bases GGGCGTTCGTGACGTCGGCCATCAATGAGGTCGACATTGAACAGGCACTGGGCCTGGATGGCCTGCAGGACGGTCCACTC GCCATTTGCGGATTCGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MVDRLGAPPAEVVERGIGGVAARITLPRAATGAFDDLLSRRVTCRNFDKQRALSRELLGHMLERSVMASARVAVGHDTAF LKKPVPSGGSLHPTETYLLIQRVQGMPSGLYHYRPIEHALQPVAPPPEPLSDFARRALSGQHWFAEAPVLLILAPRFLRS FWKYRNHAKAYRAMILDVGHIAQTLYLSARTWG
Sequences:
>Translated_193_residues MVDRLGAPPAEVVERGIGGVAARITLPRAATGAFDDLLSRRVTCRNFDKQRALSRELLGHMLERSVMASARVAVGHDTAF LKKPVPSGGSLHPTETYLLIQRVQGMPSGLYHYRPIEHALQPVAPPPEPLSDFARRALSGQHWFAEAPVLLILAPRFLRS FWKYRNHAKAYRAMILDVGHIAQTLYLSARTWG >Mature_193_residues MVDRLGAPPAEVVERGIGGVAARITLPRAATGAFDDLLSRRVTCRNFDKQRALSRELLGHMLERSVMASARVAVGHDTAF LKKPVPSGGSLHPTETYLLIQRVQGMPSGLYHYRPIEHALQPVAPPPEPLSDFARRALSGQHWFAEAPVLLILAPRFLRS FWKYRNHAKAYRAMILDVGHIAQTLYLSARTWG
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 - InterPro: IPR020051 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 21454; Mature: 21454
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDRLGAPPAEVVERGIGGVAARITLPRAATGAFDDLLSRRVTCRNFDKQRALSRELLGH CCCCCCCCHHHHHHHCCCCEEEEEECCCHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH MLERSVMASARVAVGHDTAFLKKPVPSGGSLHPTETYLLIQRVQGMPSGLYHYRPIEHAL HHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCHHHHH QPVAPPPEPLSDFARRALSGQHWFAEAPVLLILAPRFLRSFWKYRNHAKAYRAMILDVGH CCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAQTLYLSARTWG HHHHHHHHHCCCC >Mature Secondary Structure MVDRLGAPPAEVVERGIGGVAARITLPRAATGAFDDLLSRRVTCRNFDKQRALSRELLGH CCCCCCCCHHHHHHHCCCCEEEEEECCCHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH MLERSVMASARVAVGHDTAFLKKPVPSGGSLHPTETYLLIQRVQGMPSGLYHYRPIEHAL HHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCHHHHH QPVAPPPEPLSDFARRALSGQHWFAEAPVLLILAPRFLRSFWKYRNHAKAYRAMILDVGH CCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAQTLYLSARTWG HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]