Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is uidR [C]

Identifier: 21241040

GI number: 21241040

Start: 320996

End: 321616

Strand: Direct

Name: uidR [C]

Synonym: XAC0266

Alternate gene names: 21241040

Gene position: 320996-321616 (Clockwise)

Preceding gene: 77748520

Following gene: 21241041

Centisome position: 6.2

GC content: 68.6

Gene sequence:

>621_bases
ATGGCTTATCGACGCTCCGCCCTGATGGAAGAACGCTTGGCCGGCAACCGCGAACGGATCCTGCACGCGGCCCGCGTCCT
GATCGCCGAAGGCGGCTACCGCAATGCACCGGTCACCGCGGTGGCCGCGGCCGCGGGCGTATCGACCGGGCAGATTTATC
GACATTTCCCGTCAAAAGCCGAACTTTTCGTGGAAGTTCTAAGCGAGGCGGTGCAGCGTGAAATGGCCATCCTGCGTGCC
ATCGCCGCCACCCAGGCCAGCGCAGCCGAGCGCTTGCGTAGCGCGATCGCCACCTTCGTACGACGGGCGCTGGCCGGGCC
GGCGCTGGCATACGCCTTCATCGCCGAGCCGGTGGAGAGCGAGGTCGACGCCGAGCGCATCCGCGGCCGCCGCCTGTTCG
GTGAGGTGTTTCGCCAGCTGCTTGCCGAAGGCGTGGCGGCCGGGGAGTTTCCGCAGCAGTCGCTGGACGCCGCGGCTGCC
TGCATCGTCGGCGCGTTTACCGAGGCCTTGGTGGGGCCGATCGCTCCCAGCCGTGGCGACCCGCAACAGGGCGAGCAACT
GGTCGAAGCGATCTGCGGCTTCTGTCTGCGCGCGGTGGGGGCGGCGCAAACGAGCAGCTGA

Upstream 100 bases:

>100_bases
CCGGGTGGGAGCGGGCGGACCGCGCGGCGAATACGGCCAGACTAGCGGCCCGCAACAAAAAAGTGAACCAAAATTCAACT
ATTGAACCAAGAATCACACC

Downstream 100 bases:

>100_bases
CAGTGCACTGACCGCACATAAGGATGTGCCTCCCGGATGCAGCCGACTGTGCATATACTGTGCACCTACCTTGCCGGAGC
CGTGCGATGGTCGCCGTTCT

Product: AcrR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; ArcR Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Bacterial Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MAYRRSALMEERLAGNRERILHAARVLIAEGGYRNAPVTAVAAAAGVSTGQIYRHFPSKAELFVEVLSEAVQREMAILRA
IAATQASAAERLRSAIATFVRRALAGPALAYAFIAEPVESEVDAERIRGRRLFGEVFRQLLAEGVAAGEFPQQSLDAAAA
CIVGAFTEALVGPIAPSRGDPQQGEQLVEAICGFCLRAVGAAQTSS

Sequences:

>Translated_206_residues
MAYRRSALMEERLAGNRERILHAARVLIAEGGYRNAPVTAVAAAAGVSTGQIYRHFPSKAELFVEVLSEAVQREMAILRA
IAATQASAAERLRSAIATFVRRALAGPALAYAFIAEPVESEVDAERIRGRRLFGEVFRQLLAEGVAAGEFPQQSLDAAAA
CIVGAFTEALVGPIAPSRGDPQQGEQLVEAICGFCLRAVGAAQTSS
>Mature_205_residues
AYRRSALMEERLAGNRERILHAARVLIAEGGYRNAPVTAVAAAAGVSTGQIYRHFPSKAELFVEVLSEAVQREMAILRAI
AATQASAAERLRSAIATFVRRALAGPALAYAFIAEPVESEVDAERIRGRRLFGEVFRQLLAEGVAAGEFPQQSLDAAAAC
IVGAFTEALVGPIAPSRGDPQQGEQLVEAICGFCLRAVGAAQTSS

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21825; Mature: 21694

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYRRSALMEERLAGNRERILHAARVLIAEGGYRNAPVTAVAAAAGVSTGQIYRHFPSKA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHCCHHH
ELFVEVLSEAVQREMAILRAIAATQASAAERLRSAIATFVRRALAGPALAYAFIAEPVES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
EVDAERIRGRRLFGEVFRQLLAEGVAAGEFPQQSLDAAAACIVGAFTEALVGPIAPSRGD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PQQGEQLVEAICGFCLRAVGAAQTSS
HHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AYRRSALMEERLAGNRERILHAARVLIAEGGYRNAPVTAVAAAAGVSTGQIYRHFPSKA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHCCHHH
ELFVEVLSEAVQREMAILRAIAATQASAAERLRSAIATFVRRALAGPALAYAFIAEPVES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
EVDAERIRGRRLFGEVFRQLLAEGVAAGEFPQQSLDAAAACIVGAFTEALVGPIAPSRGD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PQQGEQLVEAICGFCLRAVGAAQTSS
HHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA