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The map label for this gene is xylP [H]

Identifier: 21244974

GI number: 21244974

Start: 5026497

End: 5027984

Strand: Direct

Name: xylP [H]

Synonym: XAC4257

Alternate gene names: 21244974

Gene position: 5026497-5027984 (Clockwise)

Preceding gene: 21244973

Following gene: 21244975

Centisome position: 97.12

GC content: 61.42

Gene sequence:

>1488_bases
ATGAACGATCGGTCACAGCAGCTCTCCTTGCGCGAAAAGATCGGCTACAGCCTGGGCGACCTGGCCGCCAATCTGATCTT
CCAGACGCTGGTCACTTTCCTGGCGTTCTTCTACACCGATGTGTTCCGCATTCCTGCAAGCGTGGCAGCGACGCTGATCT
TTGTGGTCGGCATGCTGGGCGCATTCGTGTTTACGCCGGCCATCGGTATCCTGGCCGATCGCACGCGCACCCGCTGGGGC
AAGTTCCGCCCGTGGATCCTGTGGACGGCGCTGCCCTTCGGGGCGTTGTCGCTGGCCGCCTTCAATACGCCCACGCTCGG
CGAGCAGGGCAAGATCGCCTACGCGTTTGCCACCTACACCTTGCTGATGCTGGTGTACGTGGCCAACAACCTGCCGTATT
CGGCCTTGAGCGGCGTGCTCACCGGCAGCATGGAGCAGCGCAACAGCTTGTCGGCGTACCGCTTTCTGGCGGTGACCTTT
GCGCAGTTCATCATCCAGGTGCTGTTGCTGCCGTTGGTCTTGATCCTGGGCAATGGCGACAAGGCGCAGGGCTTTCGCAA
CACCATGGCGCTGTTCGCTGCGATCGGCACGCTGTGCTTTTTGATCACTTTTTTCACCACGCGCGAACGGGTGCTGCCAA
TCAGCGAACAACGCAACAGCGTGCGCCAGGACCTGACCGATCTGGTCCGCAACAAACCCTGGCTGGTGATGCTGGCGCTC
ACCATCCTGGTCTTCATCAATCTGGCGATGAAGGGTGGGATGTACATCTACTACTTCAAGTACTACCTCGACGCGAATGC
GTTGACGCAGTTTCTCGATCACGCCGGCTTCAACCGCTTCATCGCCGGCGTCAACAGCGTACTGACTGGCGCCGGCATGA
GCGCGTTGCAGTGGCCACAAGATGCGCCGACTTCCGCATTCAGCGTCTTCAGCGCCGGCGGCATCCTGGCGATGATCGTG
GGCATCGGCTTTTCCAAACGCCTGGCCGACCGCCATGGCAAGCGCAATGTGTTCGGCGGCGCGCTGCTGATCTCCACGCT
GTTCCTGCTGGCGTTCTATCTGTACCCACCCAATGCGATCGGCTGGGTGTTCGCCTCCTACGTCCTGCATGGGTATTTCT
ACGGCATCACCATTCCGTTGCTCTGGGCGATGATCGCCGATGTGGCCGATTACTCGGAGTGGAAGAACCACCGCCGCGCC
ACCGCGATCATCTTCTCGGCGATGTTGTGCGGCTTGAAGATCGGCCTGAGCGTAGGTGGCGCACTGGTCGCCGGCATCCT
GGCGTTGTATGGCTATGACGCAGCATTGCCGCAGCAAAGCGCGGCCGTCACCAACGGCATCCGCCTGGCCATCAGCGTGT
ACGCCTCGCTTCCGTTCCTGCTCGGCACCGCACTGCTGGCGCTGTACGAGATCGACAAAGCGCTGGAAGTCCGCATCGAA
CACGAACTGAGCGTGCGCCGACACACCGCCCCGCTCGCCACCGTCTGA

Upstream 100 bases:

>100_bases
GAGTGTTGTCGTCATCGGTCGCCGTTCCTCCCAGCGGCGACCGGTGGCGCAATGCGCACCGCGGCGTTTTCCGCAGCATT
CTTCGAGTCCGCCCCACCTC

Downstream 100 bases:

>100_bases
CCTCCCCTCCCACTTCATGCACAGGTACGCGCATGTCCGATGAACTGCAAGCCGCCAGTCTGCAGGCGCTGGCGCGCACC
GCCATTTCCGCACCGCTGGT

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MNDRSQQLSLREKIGYSLGDLAANLIFQTLVTFLAFFYTDVFRIPASVAATLIFVVGMLGAFVFTPAIGILADRTRTRWG
KFRPWILWTALPFGALSLAAFNTPTLGEQGKIAYAFATYTLLMLVYVANNLPYSALSGVLTGSMEQRNSLSAYRFLAVTF
AQFIIQVLLLPLVLILGNGDKAQGFRNTMALFAAIGTLCFLITFFTTRERVLPISEQRNSVRQDLTDLVRNKPWLVMLAL
TILVFINLAMKGGMYIYYFKYYLDANALTQFLDHAGFNRFIAGVNSVLTGAGMSALQWPQDAPTSAFSVFSAGGILAMIV
GIGFSKRLADRHGKRNVFGGALLISTLFLLAFYLYPPNAIGWVFASYVLHGYFYGITIPLLWAMIADVADYSEWKNHRRA
TAIIFSAMLCGLKIGLSVGGALVAGILALYGYDAALPQQSAAVTNGIRLAISVYASLPFLLGTALLALYEIDKALEVRIE
HELSVRRHTAPLATV

Sequences:

>Translated_495_residues
MNDRSQQLSLREKIGYSLGDLAANLIFQTLVTFLAFFYTDVFRIPASVAATLIFVVGMLGAFVFTPAIGILADRTRTRWG
KFRPWILWTALPFGALSLAAFNTPTLGEQGKIAYAFATYTLLMLVYVANNLPYSALSGVLTGSMEQRNSLSAYRFLAVTF
AQFIIQVLLLPLVLILGNGDKAQGFRNTMALFAAIGTLCFLITFFTTRERVLPISEQRNSVRQDLTDLVRNKPWLVMLAL
TILVFINLAMKGGMYIYYFKYYLDANALTQFLDHAGFNRFIAGVNSVLTGAGMSALQWPQDAPTSAFSVFSAGGILAMIV
GIGFSKRLADRHGKRNVFGGALLISTLFLLAFYLYPPNAIGWVFASYVLHGYFYGITIPLLWAMIADVADYSEWKNHRRA
TAIIFSAMLCGLKIGLSVGGALVAGILALYGYDAALPQQSAAVTNGIRLAISVYASLPFLLGTALLALYEIDKALEVRIE
HELSVRRHTAPLATV
>Mature_495_residues
MNDRSQQLSLREKIGYSLGDLAANLIFQTLVTFLAFFYTDVFRIPASVAATLIFVVGMLGAFVFTPAIGILADRTRTRWG
KFRPWILWTALPFGALSLAAFNTPTLGEQGKIAYAFATYTLLMLVYVANNLPYSALSGVLTGSMEQRNSLSAYRFLAVTF
AQFIIQVLLLPLVLILGNGDKAQGFRNTMALFAAIGTLCFLITFFTTRERVLPISEQRNSVRQDLTDLVRNKPWLVMLAL
TILVFINLAMKGGMYIYYFKYYLDANALTQFLDHAGFNRFIAGVNSVLTGAGMSALQWPQDAPTSAFSVFSAGGILAMIV
GIGFSKRLADRHGKRNVFGGALLISTLFLLAFYLYPPNAIGWVFASYVLHGYFYGITIPLLWAMIADVADYSEWKNHRRA
TAIIFSAMLCGLKIGLSVGGALVAGILALYGYDAALPQQSAAVTNGIRLAISVYASLPFLLGTALLALYEIDKALEVRIE
HELSVRRHTAPLATV

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI1786466, Length=475, Percent_Identity=34.3157894736842, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI87082306, Length=466, Percent_Identity=34.3347639484979, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1787902, Length=489, Percent_Identity=28.0163599182004, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI145693206, Length=492, Percent_Identity=24.7967479674797, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI48994989, Length=494, Percent_Identity=23.8866396761134, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1790561, Length=500, Percent_Identity=24, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 54338; Mature: 54338

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRSQQLSLREKIGYSLGDLAANLIFQTLVTFLAFFYTDVFRIPASVAATLIFVVGMLG
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFVFTPAIGILADRTRTRWGKFRPWILWTALPFGALSLAAFNTPTLGEQGKIAYAFATYT
HHHHHHHHHHHHCCHHHHCCCCCCCCEEHHCCHHHHHHHHCCCCCCCCCCCEEHHHHHHH
LLMLVYVANNLPYSALSGVLTGSMEQRNSLSAYRFLAVTFAQFIIQVLLLPLVLILGNGD
HHHHHHHHCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KAQGFRNTMALFAAIGTLCFLITFFTTRERVLPISEQRNSVRQDLTDLVRNKPWLVMLAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
TILVFINLAMKGGMYIYYFKYYLDANALTQFLDHAGFNRFIAGVNSVLTGAGMSALQWPQ
HHHHHHHHHHHCCEEEEEHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCC
DAPTSAFSVFSAGGILAMIVGIGFSKRLADRHGKRNVFGGALLISTLFLLAFYLYPPNAI
CCCCHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
GWVFASYVLHGYFYGITIPLLWAMIADVADYSEWKNHRRATAIIFSAMLCGLKIGLSVGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVAGILALYGYDAALPQQSAAVTNGIRLAISVYASLPFLLGTALLALYEIDKALEVRIE
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HELSVRRHTAPLATV
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MNDRSQQLSLREKIGYSLGDLAANLIFQTLVTFLAFFYTDVFRIPASVAATLIFVVGMLG
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFVFTPAIGILADRTRTRWGKFRPWILWTALPFGALSLAAFNTPTLGEQGKIAYAFATYT
HHHHHHHHHHHHCCHHHHCCCCCCCCEEHHCCHHHHHHHHCCCCCCCCCCCEEHHHHHHH
LLMLVYVANNLPYSALSGVLTGSMEQRNSLSAYRFLAVTFAQFIIQVLLLPLVLILGNGD
HHHHHHHHCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KAQGFRNTMALFAAIGTLCFLITFFTTRERVLPISEQRNSVRQDLTDLVRNKPWLVMLAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
TILVFINLAMKGGMYIYYFKYYLDANALTQFLDHAGFNRFIAGVNSVLTGAGMSALQWPQ
HHHHHHHHHHHCCEEEEEHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCC
DAPTSAFSVFSAGGILAMIVGIGFSKRLADRHGKRNVFGGALLISTLFLLAFYLYPPNAI
CCCCHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
GWVFASYVLHGYFYGITIPLLWAMIADVADYSEWKNHRRATAIIFSAMLCGLKIGLSVGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVAGILALYGYDAALPQQSAAVTNGIRLAISVYASLPFLLGTALLALYEIDKALEVRIE
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HELSVRRHTAPLATV
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]