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The map label for this gene is xsa [H]

Identifier: 21244975

GI number: 21244975

Start: 5028017

End: 5029051

Strand: Direct

Name: xsa [H]

Synonym: XAC4258

Alternate gene names: 21244975

Gene position: 5028017-5029051 (Clockwise)

Preceding gene: 21244974

Following gene: 77748770

Centisome position: 97.15

GC content: 64.54

Gene sequence:

>1035_bases
ATGTCCGATGAACTGCAAGCCGCCAGTCTGCAGGCGCTGGCGCGCACCGCCATTTCCGCACCGCTGGTGACCCATCTCTA
CACCGCCGATCCGTCCGCGCATGTCTTCGACGGTGCGTTGTATATCTATCCCTCGCACGACCTCGATGCCGGCGTGGCCT
TCAGCGACGACGGCTCGCATTTCGACATGGCGGACTACCACGTGCTGCGCATGGCGCATCCGGGTGCAGCGGTGGAAGAC
CTCGGGCAAGTGCTGCATGTGCGCGATGTGCCCTGGGCGCAGCGGCAGATGTGGGCACCGGATGCGGCACAACGCAACGG
CAAGACCTATCTGTACTTTCCCGCAAAACGCGCCGACGGCATGTTCCAGATCGGCGTGGCGGTGGGTGATCGCCCCGAAG
GCCCGTTCGTGGCCGAGCCGCAGCCCATCGCCGGGACGTACTCGATCGACCCGGCCGTGCTTGCCGACGACGACGGCGCG
CATTATCTCTACTTCGGCGGCATCTGGGGCGGCCAGCTGCAGCACTACCGCGACAATGCCTATGCGCAAACGCATCAGGA
ACCGGTGGGCGACGCACCCGCGCTCGGTCCACGCGTGGCGCGCCTGCACGAGCGCATGATCGACCTGGCCGAACCCAGCC
GCGAAGTCGTCATCCTCGACGAACACGGCACTCCACTGCGCGCGGACGACCACGCCCGCCGTTTCTTCGAAGGCCCCTGG
GTCCACCAGCACGCCGGCCGGTACTACCTGTCGTATTCCACCGGCGACACCCACCGGATCTGCTACGCCACCAGCGACTC
ACCCTACGGCCCGTTTACCTATCAAGGCGTGCTGCTCGCACCGGTGGTCGGCTGGACCACGCATCACTCCATCTGTTTGT
TCCAGCAGCAGTGGTATTTGTTCTATCACGACAGCGTGCTCTCAGGCGGTCAGACGCATCTGCGCAGCATCAAGATGGCG
CCGCTGGCGCATGCTGCAGATGGAACGATCGCGACGATTTATCCGTATGGGGAAGATGCGGTATCGCCTTGGTGA

Upstream 100 bases:

>100_bases
CGCTGGAAGTCCGCATCGAACACGAACTGAGCGTGCGCCGACACACCGCCCCGCTCGCCACCGTCTGACCTCCCCTCCCA
CTTCATGCACAGGTACGCGC

Downstream 100 bases:

>100_bases
GTGCGGTTGGGTAACCGGCTGTCGGGATCCCGACCAGCCCGTCATGGCTCGACCGCCGTCGCTGAACGACACGTCCCGTC
GCCGCTGCGCTTCCAGGGCG

Product: arabinosidase

Products: NA

Alternate protein names: Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase; Alpha-N-arabinofuranosidase; Arabinosidase [H]

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSDELQAASLQALARTAISAPLVTHLYTADPSAHVFDGALYIYPSHDLDAGVAFSDDGSHFDMADYHVLRMAHPGAAVED
LGQVLHVRDVPWAQRQMWAPDAAQRNGKTYLYFPAKRADGMFQIGVAVGDRPEGPFVAEPQPIAGTYSIDPAVLADDDGA
HYLYFGGIWGGQLQHYRDNAYAQTHQEPVGDAPALGPRVARLHERMIDLAEPSREVVILDEHGTPLRADDHARRFFEGPW
VHQHAGRYYLSYSTGDTHRICYATSDSPYGPFTYQGVLLAPVVGWTTHHSICLFQQQWYLFYHDSVLSGGQTHLRSIKMA
PLAHAADGTIATIYPYGEDAVSPW

Sequences:

>Translated_344_residues
MSDELQAASLQALARTAISAPLVTHLYTADPSAHVFDGALYIYPSHDLDAGVAFSDDGSHFDMADYHVLRMAHPGAAVED
LGQVLHVRDVPWAQRQMWAPDAAQRNGKTYLYFPAKRADGMFQIGVAVGDRPEGPFVAEPQPIAGTYSIDPAVLADDDGA
HYLYFGGIWGGQLQHYRDNAYAQTHQEPVGDAPALGPRVARLHERMIDLAEPSREVVILDEHGTPLRADDHARRFFEGPW
VHQHAGRYYLSYSTGDTHRICYATSDSPYGPFTYQGVLLAPVVGWTTHHSICLFQQQWYLFYHDSVLSGGQTHLRSIKMA
PLAHAADGTIATIYPYGEDAVSPW
>Mature_343_residues
SDELQAASLQALARTAISAPLVTHLYTADPSAHVFDGALYIYPSHDLDAGVAFSDDGSHFDMADYHVLRMAHPGAAVEDL
GQVLHVRDVPWAQRQMWAPDAAQRNGKTYLYFPAKRADGMFQIGVAVGDRPEGPFVAEPQPIAGTYSIDPAVLADDDGAH
YLYFGGIWGGQLQHYRDNAYAQTHQEPVGDAPALGPRVARLHERMIDLAEPSREVVILDEHGTPLRADDHARRFFEGPWV
HQHAGRYYLSYSTGDTHRICYATSDSPYGPFTYQGVLLAPVVGWTTHHSICLFQQQWYLFYHDSVLSGGQTHLRSIKMAP
LAHAADGTIATIYPYGEDAVSPW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006710 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.37; =3.2.1.55 [H]

Molecular weight: Translated: 38013; Mature: 37881

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDELQAASLQALARTAISAPLVTHLYTADPSAHVFDGALYIYPSHDLDAGVAFSDDGSH
CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCEEEEEECCCCCCCEEECCCCCC
FDMADYHVLRMAHPGAAVEDLGQVLHVRDVPWAQRQMWAPDAAQRNGKTYLYFPAKRADG
CCCCCEEEEEEECCCCHHHHHHHHEEECCCCHHHHHHCCCCHHHCCCCEEEEEECCCCCC
MFQIGVAVGDRPEGPFVAEPQPIAGTYSIDPAVLADDDGAHYLYFGGIWGGQLQHYRDNA
EEEEEEEECCCCCCCCCCCCCCCCEEEECCCEEEECCCCCEEEEECCCCCCCHHHHCCCC
YAQTHQEPVGDAPALGPRVARLHERMIDLAEPSREVVILDEHGTPLRADDHARRFFEGPW
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCC
VHQHAGRYYLSYSTGDTHRICYATSDSPYGPFTYQGVLLAPVVGWTTHHSICLFQQQWYL
EECCCCEEEEEECCCCCEEEEEECCCCCCCCEEECCEEEEEEECCCCCCEEEEEEEEEEE
FYHDSVLSGGQTHLRSIKMAPLAHAADGTIATIYPYGEDAVSPW
EEECCHHCCCHHHHHEEECCCCCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
SDELQAASLQALARTAISAPLVTHLYTADPSAHVFDGALYIYPSHDLDAGVAFSDDGSH
CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCEEEEEECCCCCCCEEECCCCCC
FDMADYHVLRMAHPGAAVEDLGQVLHVRDVPWAQRQMWAPDAAQRNGKTYLYFPAKRADG
CCCCCEEEEEEECCCCHHHHHHHHEEECCCCHHHHHHCCCCHHHCCCCEEEEEECCCCCC
MFQIGVAVGDRPEGPFVAEPQPIAGTYSIDPAVLADDDGAHYLYFGGIWGGQLQHYRDNA
EEEEEEEECCCCCCCCCCCCCCCCEEEECCCEEEECCCCCEEEEECCCCCCCHHHHCCCC
YAQTHQEPVGDAPALGPRVARLHERMIDLAEPSREVVILDEHGTPLRADDHARRFFEGPW
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCC
VHQHAGRYYLSYSTGDTHRICYATSDSPYGPFTYQGVLLAPVVGWTTHHSICLFQQQWYL
EECCCCEEEEEECCCCCEEEEEECCCCCCCCEEECCEEEEEEECCCCCCEEEEEEEEEEE
FYHDSVLSGGQTHLRSIKMAPLAHAADGTIATIYPYGEDAVSPW
EEECCHHCCCHHHHHEEECCCCCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7766665 [H]