Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is mtlD [H]
Identifier: 21244949
GI number: 21244949
Start: 4997270
End: 4998742
Strand: Direct
Name: mtlD [H]
Synonym: XAC4232
Alternate gene names: 21244949
Gene position: 4997270-4998742 (Clockwise)
Preceding gene: 21244948
Following gene: 21244952
Centisome position: 96.56
GC content: 66.26
Gene sequence:
>1473_bases ATGCACGCACCACGTCTTTCGCTCGACACCCTCGGCACATTGCCGCCGGTGGTTGCAAGGCCCAGCTATGACCTGGCAAG CACCACCATCGGCATCGTGCATCTCGGCGCAGGCGCCTTCCACCGTGCTCACCAGGCCGTCTATATCGACGACCTGCTTG CCGAAGACCCCAGCTGGGCCATCAGCGCCGTCTCGCTGCATCGCCCGCAGGTGCGCGATGCCTTACGTCCGCAAGAGGGC CTGTACACCCTCGCCCTGCTCGACGAACACCCGCAACTGCGCGTCATCGGGGCCATCGGCGAGGTGCTCTGCGCCGCAGA CGAACACGCTGCCGTGCTCGCGCGCCTTGCCGACCCGGCAGTACGCCTGGTCACGCTGACCATCACCGAGAAAGGCTATT GCCTGGCCGGCGACACGCTCGACCTCTCGCATCCGGACATCGCGCACGATATCGCCCATCCCGCAACTCCACAGAGCGCC ATCGGCTACCTCGTGGCCGGGCTGCGGCAGCGCATGCACAACGGCACCGCGCCGTTCACTGCGCTGAGCTGCGACAACCT CACCGACAACGGCACGCTGCTGCAGCGCGCGGTTGTGCGGCTCGCAGCGCAGGTCGACCCGGCGCTTGCGGAATGGATCG CGCAGCACGCCGCCTTCCCGCGCTCGATGGTCGACAGCATCACGCCCGCCACCGATGATGCGCTGCGCGCGCGCATCCAC GATCAGCTTGGCGTGCACGATGCCTGGCCGATCCAGCGCGAGCGCTACAGCCAGTGGGTGATCGAAGACCGTTTCTGCAA TGGTCGCCCTGCATTCGAGCGCGCAGGCGTCACCCTGAGCGAAGACATCGCCGGCTACGCGCGCGCCAAACTGCGTCTGC TCAACGCGCCGCACTCGGCGCTGGCGTATCTCGGCAGCCTGCTGAACCTGGACACCGTGGCCGACGCCATGCGTCACCGC GAACTTGCCGCGTACGTGCAAACATTGATGCGCGCGGAGATTGCACCCACCTTGCAGACCATGGACGGCTTTGATGCGCA AGGCTACAGCGACGCCATCCTTGCCCGTTTTCGCAATCCCGCCATCCGCCACCTGCTCGCCCAGATCGCCTGGGACGGCT CGCTGAAAATTCCGGTGCGACTGCTCGGCACGATCGGCGATGCACTCGCTACCGGCCAACCGATCCGGCACCTATGCCTG GCCGTTGCCGCGTGGCTGCACTTCGTCCGCAGGCAGGCGCACAACGGCGTTCCGCTGACCGACCCGATGAACGATGCCCT CGGTGCGCATGGTCGCAATGCGACGGGCGATGCCGGTCATGATGTTGCCGCCTTCCTGACACTGGAGGCGGTGTTCGGAT CGTTGTCCGCAGACGCGCGTTTTTGTGCGTCCTTGCAGGCGGCTTATGCAGCGCTTGGCACGGCCACCCCGACTGACGTG ACACACGCCCTTGGGTCGATGGGTGAGGTGTAA
Upstream 100 bases:
>100_bases CTGCGATTGCTTCAAAACCCCCTCTCCTCCCGGGAGAGGGTTTGGGGTAAGGGTTCGGCGTAGCCCCTCCTCCAAACACC CCTACCTCGCAGGCGACACG
Downstream 100 bases:
>100_bases GACGGTGCACAGCGCCATGCATTGCGCGGGCGGGCGCCATCAGGTCGGTGAGCAGCGCAGTCGCCTTGCTCATGCAATGC ATCACCCTGACGCGATCACC
Product: mannitol dehydrogenase
Products: NA
Alternate protein names: Fructuronate reductase [H]
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MHAPRLSLDTLGTLPPVVARPSYDLASTTIGIVHLGAGAFHRAHQAVYIDDLLAEDPSWAISAVSLHRPQVRDALRPQEG LYTLALLDEHPQLRVIGAIGEVLCAADEHAAVLARLADPAVRLVTLTITEKGYCLAGDTLDLSHPDIAHDIAHPATPQSA IGYLVAGLRQRMHNGTAPFTALSCDNLTDNGTLLQRAVVRLAAQVDPALAEWIAQHAAFPRSMVDSITPATDDALRARIH DQLGVHDAWPIQRERYSQWVIEDRFCNGRPAFERAGVTLSEDIAGYARAKLRLLNAPHSALAYLGSLLNLDTVADAMRHR ELAAYVQTLMRAEIAPTLQTMDGFDAQGYSDAILARFRNPAIRHLLAQIAWDGSLKIPVRLLGTIGDALATGQPIRHLCL AVAAWLHFVRRQAHNGVPLTDPMNDALGAHGRNATGDAGHDVAAFLTLEAVFGSLSADARFCASLQAAYAALGTATPTDV THALGSMGEV
Sequences:
>Translated_490_residues MHAPRLSLDTLGTLPPVVARPSYDLASTTIGIVHLGAGAFHRAHQAVYIDDLLAEDPSWAISAVSLHRPQVRDALRPQEG LYTLALLDEHPQLRVIGAIGEVLCAADEHAAVLARLADPAVRLVTLTITEKGYCLAGDTLDLSHPDIAHDIAHPATPQSA IGYLVAGLRQRMHNGTAPFTALSCDNLTDNGTLLQRAVVRLAAQVDPALAEWIAQHAAFPRSMVDSITPATDDALRARIH DQLGVHDAWPIQRERYSQWVIEDRFCNGRPAFERAGVTLSEDIAGYARAKLRLLNAPHSALAYLGSLLNLDTVADAMRHR ELAAYVQTLMRAEIAPTLQTMDGFDAQGYSDAILARFRNPAIRHLLAQIAWDGSLKIPVRLLGTIGDALATGQPIRHLCL AVAAWLHFVRRQAHNGVPLTDPMNDALGAHGRNATGDAGHDVAAFLTLEAVFGSLSADARFCASLQAAYAALGTATPTDV THALGSMGEV >Mature_490_residues MHAPRLSLDTLGTLPPVVARPSYDLASTTIGIVHLGAGAFHRAHQAVYIDDLLAEDPSWAISAVSLHRPQVRDALRPQEG LYTLALLDEHPQLRVIGAIGEVLCAADEHAAVLARLADPAVRLVTLTITEKGYCLAGDTLDLSHPDIAHDIAHPATPQSA IGYLVAGLRQRMHNGTAPFTALSCDNLTDNGTLLQRAVVRLAAQVDPALAEWIAQHAAFPRSMVDSITPATDDALRARIH DQLGVHDAWPIQRERYSQWVIEDRFCNGRPAFERAGVTLSEDIAGYARAKLRLLNAPHSALAYLGSLLNLDTVADAMRHR ELAAYVQTLMRAEIAPTLQTMDGFDAQGYSDAILARFRNPAIRHLLAQIAWDGSLKIPVRLLGTIGDALATGQPIRHLCL AVAAWLHFVRRQAHNGVPLTDPMNDALGAHGRNATGDAGHDVAAFLTLEAVFGSLSADARFCASLQAAYAALGTATPTDV THALGSMGEV
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxuB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790779, Length=466, Percent_Identity=41.2017167381974, Blast_Score=320, Evalue=2e-88, Organism=Escherichia coli, GI1788497, Length=469, Percent_Identity=41.36460554371, Blast_Score=317, Evalue=1e-87, Organism=Escherichia coli, GI1787823, Length=464, Percent_Identity=39.2241379310345, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI48994885, Length=414, Percent_Identity=27.7777777777778, Blast_Score=111, Evalue=8e-26, Organism=Escherichia coli, GI1790028, Length=386, Percent_Identity=24.6113989637306, Blast_Score=89, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6324401, Length=475, Percent_Identity=34.9473684210526, Blast_Score=281, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6320765, Length=475, Percent_Identity=34.9473684210526, Blast_Score=281, Evalue=2e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.57 [H]
Molecular weight: Translated: 52583; Mature: 52583
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAPRLSLDTLGTLPPVVARPSYDLASTTIGIVHLGAGAFHRAHQAVYIDDLLAEDPSWA CCCCCCCHHHHCCCCCCCCCCCCCHHHHHEEHEEECCHHHHHHHHHHHHHHHHCCCCCCE ISAVSLHRPQVRDALRPQEGLYTLALLDEHPQLRVIGAIGEVLCAADEHAAVLARLADPA EEHHHHCCHHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHHHCCCHHHHHHHHHCCCC VRLVTLTITEKGYCLAGDTLDLSHPDIAHDIAHPATPQSAIGYLVAGLRQRMHNGTAPFT EEEEEEEEECCCEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEE ALSCDNLTDNGTLLQRAVVRLAAQVDPALAEWIAQHAAFPRSMVDSITPATDDALRARIH EEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH DQLGVHDAWPIQRERYSQWVIEDRFCNGRPAFERAGVTLSEDIAGYARAKLRLLNAPHSA HHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHH LAYLGSLLNLDTVADAMRHRELAAYVQTLMRAEIAPTLQTMDGFDAQGYSDAILARFRNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCH AIRHLLAQIAWDGSLKIPVRLLGTIGDALATGQPIRHLCLAVAAWLHFVRRQAHNGVPLT HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC DPMNDALGAHGRNATGDAGHDVAAFLTLEAVFGSLSADARFCASLQAAYAALGTATPTDV CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH THALGSMGEV HHHHHCCCCC >Mature Secondary Structure MHAPRLSLDTLGTLPPVVARPSYDLASTTIGIVHLGAGAFHRAHQAVYIDDLLAEDPSWA CCCCCCCHHHHCCCCCCCCCCCCCHHHHHEEHEEECCHHHHHHHHHHHHHHHHCCCCCCE ISAVSLHRPQVRDALRPQEGLYTLALLDEHPQLRVIGAIGEVLCAADEHAAVLARLADPA EEHHHHCCHHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHHHCCCHHHHHHHHHCCCC VRLVTLTITEKGYCLAGDTLDLSHPDIAHDIAHPATPQSAIGYLVAGLRQRMHNGTAPFT EEEEEEEEECCCEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEE ALSCDNLTDNGTLLQRAVVRLAAQVDPALAEWIAQHAAFPRSMVDSITPATDDALRARIH EEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH DQLGVHDAWPIQRERYSQWVIEDRFCNGRPAFERAGVTLSEDIAGYARAKLRLLNAPHSA HHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHH LAYLGSLLNLDTVADAMRHRELAAYVQTLMRAEIAPTLQTMDGFDAQGYSDAILARFRNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCH AIRHLLAQIAWDGSLKIPVRLLGTIGDALATGQPIRHLCLAVAAWLHFVRRQAHNGVPLT HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC DPMNDALGAHGRNATGDAGHDVAAFLTLEAVFGSLSADARFCASLQAAYAALGTATPTDV CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH THALGSMGEV HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]