Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is cbg-1 [H]
Identifier: 21244948
GI number: 21244948
Start: 4994415
End: 4997120
Strand: Direct
Name: cbg-1 [H]
Synonym: XAC4231
Alternate gene names: 21244948
Gene position: 4994415-4997120 (Clockwise)
Preceding gene: 77748767
Following gene: 21244949
Centisome position: 96.5
GC content: 68.0
Gene sequence:
>2706_bases ATGCCTTCGCATCCGCCCACCCGGTTTCGTTCGCTCGCGCAGGGTGTCCTGCTTGCATTGGGGTGCGCTACAGGCGCTGC CCACGCCGCCACGCCGCCGTATCTGGACACGCAGCGCTCTTTCGAGGCACGCGCGGCCGATCTGGTGTCGCGCATGACCC TGGAAGAAAAGGCCGCGCAGATGCAGAACGCCGCACCGGCGATTCCACGGCTACAGGTGCCTGCCTACGATTGGTGGAAC GAGGCGCTGCATGGCGTGGCGCGCGCCGGCGGGGCGACGGTGTTCCCGCAGGCGATCGGCATGGCCGCCACCTTCGACCT ACCGCTGATGCACGAGGTCGCCACCGCGATCAGCGACGAGGCGCGCGCCAAGCACCATCAGTTCCTGCGCCAGAACCAGC ACGCGCGCTATCAGGGGCTGACCTTCTGGTCGCCGAACATCAATATCTTCCGTGATCCGCGCTGGGGCCGCGGCCAGGAA ACCTACGGCGAGGATCCCTTCCTCACCGCGCGCATGGGCGTGACCTTCGTGCAGGGCCTGCAGGGCGAAGGCGCCGCCGC ACCGAAGAACGCGCAGGGCGAGCCGTACCGCAAGCTCGACGCCACCGCCAAGCATTTGGCCGTGCACAGTGGCCCGGAAG CCGATCGTCACCACTTCGATGCGCGCCCCTCCCAGCGCGACCTGTACGAGACCTACCTGCCGGCGTTCGAGGCACTGGTC AAGGAGGGCAAGGTGGATGCGGTGATGGGCGCCTACAACCGCGTGTACGGCGAGTCGGCCAGCGCCAGCAAGTTCCTGCT GCAGGATGTACTGCGTGACCAATGGGGCTTCAGGGGCTACGTGGTGTCCGACTGCTGGGCGATCGTGGATATCTGGAAGC ACCACAAGATCGTCGCCACCCGCGAACAAGCCGCTGCGCTGGCGGTCAAGCACGGCACCGAGCTGGAATGCGGGGAGGAG TACGCCACCCTGCCGGCAGCGGTCCGCCAGGGCCTGATCGACGAAGCGCAGATCGACACCGCGTTGAAGACCTTGATGAC CGCGCGCATGCGCCTGGGCATGTTCGATCCGCCCGGGCAGTTGCCGTGGTCGACGATTCCCGCCTCGGTCAACCAATCGC CGGCGCACGATGCGCTGGCACGACGCACCGCGCGCGAATCGCTGGTGCTGTTGAAGAACGATGGCCTGCTGCCGTTGTCG CGCGCCAAGTTCAAGCGCATCGCGGTGATCGGCCCCACCGCCGACGACACCATGGCGCTGCTGGGCAATTACTACGGCAC GCCGGCCGCGCCGGTCACCGTGCTGCAAGGCATCCGAGCCGCGGCCCCGAATGCGCAGGTGCTGTATGCGCGCGGCGCCG ATCTGGTCGAGGGGCGCGACGATCCCGCCGCCACCCCGTTGATCGAACCGCAATACCTGCGGCCATCGGCCAACTCGCCC GAGCGCGGTTTGCGTGGCGAGTACTTCCGCAATCGCGACTTGTCGGGTAAGCCGGCCCTGGTGCGGGTGGATGCGCAGAT CGGCTTCAAATGGGACCGTGGCTCGCCGACCGACAATCTGCTGGCGCGTGGCGAAGCCGGGCCAAGCGAAGCGGTGCCGG CGGACAACTTCAGCATCCGCTGGAGCGGCCAGCTGGTCCCGCCGACCACCGGCACCTACCACCTGGAAGCGGCCGCCGAC GACGGCGTGCGCCTGTACCTGGACGGCAAGCCGGTGATCGACCGCTGGAGCACCAGCGACCGCCTGCACGCCGATGGCGT CGACGTGCAGCTGCAGGCCGGCCGCGCCTACGAGGTGCGGCTGGAATACTTCGAAGGCGAGCGCGATGCCGCCGTGCGCC TGGCCTGGCGCCAACCCGGGGCCAGGCCACCCTTGCAGGAGGCGCTGGACGTGGCACGCAGCGCTGATGTGGTGGTCTTC GTCGGTGGCCTGACCGGCGATGTCGAAGGCGAGGAAATGAAGGTGAATTACCCCGGCTTTGCCGGCGGCGACCGCACCGA CCTGCGCCTGCCCAAGCCGCAGCGCGACCTGCTCGAAGCCTTGCAGGCCACCGGCAGGCCGGTGGTGGCGGTGCTGACCA CCGGCTCGGCGCTGGCCATCGATTGGGCGCAGCAGCACCTGCCGGCGATCCTGCTGGCCTGGTATCCCGGCCAGCGCGGC GGCACCGCGGTGGCCGACACGCTGTTCGGCGATGCCAATCCGGGCGGCCGCTTGCCGGTGACGTTCTACAAGGAAAGCGA AACACTGCCGGCGTTCGACGACTACGCCATGCGCGGCCGCACCTACCGCTACTTCGGCGGCACGCCGCTGTATCCGTTCG GCCACGGCCTGTCGTACACGCAGTTCGCCTATTCAGGACTGCGCCTGGACCGCACCACCATCGCAACCGATGGCTCGCTC GCTGCCACCGTCACGGTCAAGAACACCGGCCAGCGCGCGGGCGATGAGGTGGTGCAGCTGTATCTGCATCCGCTCGCCCC GCAACGCGAACGTGCCGGCAAGGAATTGCACGGATTTCAACGTATCGCCCTGCAGCCGGGCGAGCAGCGCGAGCTAGGCT TCACCATCAACGCAAAGGATGCACTGCGGCTCTACGACGAGCAGCGCAAGGCGTATGGGGTGGACCCAGGCGCCTATGAA GTGCAGATCGGCGCCTCCAGTGCGGATATCCGCGCCAGGCAGCGCTTTACCGTGACCGACAAGTAG
Upstream 100 bases:
>100_bases ATGCCGGCTTTCTCAGCACCGCACAGGCCGGCGGTTTCGTCGGCAGCATGATCGGGCCTTTTGCCCAATCGCACCCCGAC CGCTCTTCACAGGACTGACC
Downstream 100 bases:
>100_bases CAGCCGCTGACACTCTCGCCATGCGGCCGTGGGTAAACAATCCCTTCGGCTGCGATTGCTTCAAAACCCCCTCTCCTCCC GGGAGAGGGTTTGGGGTAAG
Product: glucan 1,4-beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 901; Mature: 900
Protein sequence:
>901_residues MPSHPPTRFRSLAQGVLLALGCATGAAHAATPPYLDTQRSFEARAADLVSRMTLEEKAAQMQNAAPAIPRLQVPAYDWWN EALHGVARAGGATVFPQAIGMAATFDLPLMHEVATAISDEARAKHHQFLRQNQHARYQGLTFWSPNINIFRDPRWGRGQE TYGEDPFLTARMGVTFVQGLQGEGAAAPKNAQGEPYRKLDATAKHLAVHSGPEADRHHFDARPSQRDLYETYLPAFEALV KEGKVDAVMGAYNRVYGESASASKFLLQDVLRDQWGFRGYVVSDCWAIVDIWKHHKIVATREQAAALAVKHGTELECGEE YATLPAAVRQGLIDEAQIDTALKTLMTARMRLGMFDPPGQLPWSTIPASVNQSPAHDALARRTARESLVLLKNDGLLPLS RAKFKRIAVIGPTADDTMALLGNYYGTPAAPVTVLQGIRAAAPNAQVLYARGADLVEGRDDPAATPLIEPQYLRPSANSP ERGLRGEYFRNRDLSGKPALVRVDAQIGFKWDRGSPTDNLLARGEAGPSEAVPADNFSIRWSGQLVPPTTGTYHLEAAAD DGVRLYLDGKPVIDRWSTSDRLHADGVDVQLQAGRAYEVRLEYFEGERDAAVRLAWRQPGARPPLQEALDVARSADVVVF VGGLTGDVEGEEMKVNYPGFAGGDRTDLRLPKPQRDLLEALQATGRPVVAVLTTGSALAIDWAQQHLPAILLAWYPGQRG GTAVADTLFGDANPGGRLPVTFYKESETLPAFDDYAMRGRTYRYFGGTPLYPFGHGLSYTQFAYSGLRLDRTTIATDGSL AATVTVKNTGQRAGDEVVQLYLHPLAPQRERAGKELHGFQRIALQPGEQRELGFTINAKDALRLYDEQRKAYGVDPGAYE VQIGASSADIRARQRFTVTDK
Sequences:
>Translated_901_residues MPSHPPTRFRSLAQGVLLALGCATGAAHAATPPYLDTQRSFEARAADLVSRMTLEEKAAQMQNAAPAIPRLQVPAYDWWN EALHGVARAGGATVFPQAIGMAATFDLPLMHEVATAISDEARAKHHQFLRQNQHARYQGLTFWSPNINIFRDPRWGRGQE TYGEDPFLTARMGVTFVQGLQGEGAAAPKNAQGEPYRKLDATAKHLAVHSGPEADRHHFDARPSQRDLYETYLPAFEALV KEGKVDAVMGAYNRVYGESASASKFLLQDVLRDQWGFRGYVVSDCWAIVDIWKHHKIVATREQAAALAVKHGTELECGEE YATLPAAVRQGLIDEAQIDTALKTLMTARMRLGMFDPPGQLPWSTIPASVNQSPAHDALARRTARESLVLLKNDGLLPLS RAKFKRIAVIGPTADDTMALLGNYYGTPAAPVTVLQGIRAAAPNAQVLYARGADLVEGRDDPAATPLIEPQYLRPSANSP ERGLRGEYFRNRDLSGKPALVRVDAQIGFKWDRGSPTDNLLARGEAGPSEAVPADNFSIRWSGQLVPPTTGTYHLEAAAD DGVRLYLDGKPVIDRWSTSDRLHADGVDVQLQAGRAYEVRLEYFEGERDAAVRLAWRQPGARPPLQEALDVARSADVVVF VGGLTGDVEGEEMKVNYPGFAGGDRTDLRLPKPQRDLLEALQATGRPVVAVLTTGSALAIDWAQQHLPAILLAWYPGQRG GTAVADTLFGDANPGGRLPVTFYKESETLPAFDDYAMRGRTYRYFGGTPLYPFGHGLSYTQFAYSGLRLDRTTIATDGSL AATVTVKNTGQRAGDEVVQLYLHPLAPQRERAGKELHGFQRIALQPGEQRELGFTINAKDALRLYDEQRKAYGVDPGAYE VQIGASSADIRARQRFTVTDK >Mature_900_residues PSHPPTRFRSLAQGVLLALGCATGAAHAATPPYLDTQRSFEARAADLVSRMTLEEKAAQMQNAAPAIPRLQVPAYDWWNE ALHGVARAGGATVFPQAIGMAATFDLPLMHEVATAISDEARAKHHQFLRQNQHARYQGLTFWSPNINIFRDPRWGRGQET YGEDPFLTARMGVTFVQGLQGEGAAAPKNAQGEPYRKLDATAKHLAVHSGPEADRHHFDARPSQRDLYETYLPAFEALVK EGKVDAVMGAYNRVYGESASASKFLLQDVLRDQWGFRGYVVSDCWAIVDIWKHHKIVATREQAAALAVKHGTELECGEEY ATLPAAVRQGLIDEAQIDTALKTLMTARMRLGMFDPPGQLPWSTIPASVNQSPAHDALARRTARESLVLLKNDGLLPLSR AKFKRIAVIGPTADDTMALLGNYYGTPAAPVTVLQGIRAAAPNAQVLYARGADLVEGRDDPAATPLIEPQYLRPSANSPE RGLRGEYFRNRDLSGKPALVRVDAQIGFKWDRGSPTDNLLARGEAGPSEAVPADNFSIRWSGQLVPPTTGTYHLEAAADD GVRLYLDGKPVIDRWSTSDRLHADGVDVQLQAGRAYEVRLEYFEGERDAAVRLAWRQPGARPPLQEALDVARSADVVVFV GGLTGDVEGEEMKVNYPGFAGGDRTDLRLPKPQRDLLEALQATGRPVVAVLTTGSALAIDWAQQHLPAILLAWYPGQRGG TAVADTLFGDANPGGRLPVTFYKESETLPAFDDYAMRGRTYRYFGGTPLYPFGHGLSYTQFAYSGLRLDRTTIATDGSLA ATVTVKNTGQRAGDEVVQLYLHPLAPQRERAGKELHGFQRIALQPGEQRELGFTINAKDALRLYDEQRKAYGVDPGAYEV QIGASSADIRARQRFTVTDK
Specific function: Involved in modifying a vir-inducing plant signal molecule. Hydrolyzes coniferin but not cellobiose [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=409, Percent_Identity=34.718826405868, Blast_Score=204, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 - InterPro: IPR011658 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 98513; Mature: 98382
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSHPPTRFRSLAQGVLLALGCATGAAHAATPPYLDTQRSFEARAADLVSRMTLEEKAAQ CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MQNAAPAIPRLQVPAYDWWNEALHGVARAGGATVFPQAIGMAATFDLPLMHEVATAISDE HHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEECHHHHCCEEECCCHHHHHHHHHHHHH ARAKHHQFLRQNQHARYQGLTFWSPNINIFRDPRWGRGQETYGEDPFLTARMGVTFVQGL HHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCEEEHHHHHHHHHCC QGEGAAAPKNAQGEPYRKLDATAKHLAVHSGPEADRHHFDARPSQRDLYETYLPAFEALV CCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHH KEGKVDAVMGAYNRVYGESASASKFLLQDVLRDQWGFRGYVVSDCWAIVDIWKHHKIVAT HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCEEEEE REQAAALAVKHGTELECGEEYATLPAAVRQGLIDEAQIDTALKTLMTARMRLGMFDPPGQ HHHHHEEHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC LPWSTIPASVNQSPAHDALARRTARESLVLLKNDGLLPLSRAKFKRIAVIGPTADDTMAL CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHH LGNYYGTPAAPVTVLQGIRAAAPNAQVLYARGADLVEGRDDPAATPLIEPQYLRPSANSP HHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCC ERGLRGEYFRNRDLSGKPALVRVDAQIGFKWDRGSPTDNLLARGEAGPSEAVPADNFSIR CCCCCCCHHCCCCCCCCCEEEEEEEEECEEECCCCCHHHHEECCCCCCCCCCCCCCEEEE WSGQLVPPTTGTYHLEAAADDGVRLYLDGKPVIDRWSTSDRLHADGVDVQLQAGRAYEVR ECCEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCEEEEE LEYFEGERDAAVRLAWRQPGARPPLQEALDVARSADVVVFVGGLTGDVEGEEMKVNYPGF EEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCC AGGDRTDLRLPKPQRDLLEALQATGRPVVAVLTTGSALAIDWAQQHLPAILLAWYPGQRG CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEHHHHHCCCEEEEEECCCCCC GTAVADTLFGDANPGGRLPVTFYKESETLPAFDDYAMRGRTYRYFGGTPLYPFGHGLSYT CCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCHH QFAYSGLRLDRTTIATDGSLAATVTVKNTGQRAGDEVVQLYLHPLAPQRERAGKELHGFQ HHHHCCEEECCEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHCCHHHHHHH RIALQPGEQRELGFTINAKDALRLYDEQRKAYGVDPGAYEVQIGASSADIRARQRFTVTD HHHCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHCEEEEECC K C >Mature Secondary Structure PSHPPTRFRSLAQGVLLALGCATGAAHAATPPYLDTQRSFEARAADLVSRMTLEEKAAQ CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MQNAAPAIPRLQVPAYDWWNEALHGVARAGGATVFPQAIGMAATFDLPLMHEVATAISDE HHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEECHHHHCCEEECCCHHHHHHHHHHHHH ARAKHHQFLRQNQHARYQGLTFWSPNINIFRDPRWGRGQETYGEDPFLTARMGVTFVQGL HHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCEEEHHHHHHHHHCC QGEGAAAPKNAQGEPYRKLDATAKHLAVHSGPEADRHHFDARPSQRDLYETYLPAFEALV CCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHH KEGKVDAVMGAYNRVYGESASASKFLLQDVLRDQWGFRGYVVSDCWAIVDIWKHHKIVAT HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCEEEEE REQAAALAVKHGTELECGEEYATLPAAVRQGLIDEAQIDTALKTLMTARMRLGMFDPPGQ HHHHHEEHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC LPWSTIPASVNQSPAHDALARRTARESLVLLKNDGLLPLSRAKFKRIAVIGPTADDTMAL CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHH LGNYYGTPAAPVTVLQGIRAAAPNAQVLYARGADLVEGRDDPAATPLIEPQYLRPSANSP HHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCC ERGLRGEYFRNRDLSGKPALVRVDAQIGFKWDRGSPTDNLLARGEAGPSEAVPADNFSIR CCCCCCCHHCCCCCCCCCEEEEEEEEECEEECCCCCHHHHEECCCCCCCCCCCCCCEEEE WSGQLVPPTTGTYHLEAAADDGVRLYLDGKPVIDRWSTSDRLHADGVDVQLQAGRAYEVR ECCEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCEEEEE LEYFEGERDAAVRLAWRQPGARPPLQEALDVARSADVVVFVGGLTGDVEGEEMKVNYPGF EEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCC AGGDRTDLRLPKPQRDLLEALQATGRPVVAVLTTGSALAIDWAQQHLPAILLAWYPGQRG CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEHHHHHCCCEEEEEECCCCCC GTAVADTLFGDANPGGRLPVTFYKESETLPAFDDYAMRGRTYRYFGGTPLYPFGHGLSYT CCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCHH QFAYSGLRLDRTTIATDGSLAATVTVKNTGQRAGDEVVQLYLHPLAPQRERAGKELHGFQ HHHHCCEEECCEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHCCHHHHHHH RIALQPGEQRELGFTINAKDALRLYDEQRKAYGVDPGAYEVQIGASSADIRARQRFTVTD HHHCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHCEEEEECC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537792 [H]