Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244915
Identifier: 21244915
GI number: 21244915
Start: 4942743
End: 4943339
Strand: Direct
Name: 21244915
Synonym: XAC4198
Alternate gene names: NA
Gene position: 4942743-4943339 (Clockwise)
Preceding gene: 21244914
Following gene: 21244916
Centisome position: 95.5
GC content: 60.64
Gene sequence:
>597_bases GTGCGTTGTGCGTTGTGCGTTGTGCGTTGTGCGTCACGAGGCTACCGCTTCCGTGCCGATGGACAACCCGTAGCGATAGC GCGACGCGCAGCATTACCGCAGTGCACAGAGGGCAAGACACAACGGCGCAGCGCCAAACCTGTCGCGCTAGCTTGCGCAT CCAGCGCGCATCCACGCGGCCGCATGCCGCAGAAAAGTACCGCATCAGCAACGCGCCATTCCCTTCTCCCGCCGGGAGAA GGTGCCCGGAAGGGGCGGATGAGGGTACGGCCACCCGCATCGCGCATCTCGCCACCTCCGCACGCCGTACGACAGGCAAC GCGCAGCGCAATCAGCCGCAGTGCTGAGCCAATAAGCCCCATTCGCTACATACCGCAGAACGCTGCAATCGACCGCCGAC ATCGCGCACCGGGTTCGTCGTGCCCTTCCCCATCGCGTCCATCCGTTGCAAAGGCCCACACCCAAGGTTGCGCAACATTT CCTGGTTACTTCTTGCAAACCGCCATCATCGGCGCATCTTCGGCCAAGACCGCATCAATCATTTTTTCTATCGCAACACA GGAAATAGTGATGAATCATCACGATTGGTGCGAATAG
Upstream 100 bases:
>100_bases GATCCTGCCGCAGTGCAACATACTTCACGTGCATCGGAGCGGGTGTAAGCGGACGCACACGACGTGCGTGATGCCTACGG TGAGTGCCGCCTAGGCCGTT
Downstream 100 bases:
>100_bases CGAACCGATTGAACGCAAATTTTTCAAGCTGGTCGCACCAGATGCGAACGGACCCGACCATTGTCTGAATGCAGCGCTGC GCAAGTGTTGCGCGGTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRCALCVVRCASRGYRFRADGQPVAIARRAALPQCTEGKTQRRSAKPVALACASSAHPRGRMPQKSTASATRHSLLPPGE GARKGRMRVRPPASRISPPPHAVRQATRSAISRSAEPISPIRYIPQNAAIDRRHRAPGSSCPSPSRPSVAKAHTQGCATF PGYFLQTAIIGASSAKTASIIFSIATQEIVMNHHDWCE
Sequences:
>Translated_198_residues MRCALCVVRCASRGYRFRADGQPVAIARRAALPQCTEGKTQRRSAKPVALACASSAHPRGRMPQKSTASATRHSLLPPGE GARKGRMRVRPPASRISPPPHAVRQATRSAISRSAEPISPIRYIPQNAAIDRRHRAPGSSCPSPSRPSVAKAHTQGCATF PGYFLQTAIIGASSAKTASIIFSIATQEIVMNHHDWCE >Mature_198_residues MRCALCVVRCASRGYRFRADGQPVAIARRAALPQCTEGKTQRRSAKPVALACASSAHPRGRMPQKSTASATRHSLLPPGE GARKGRMRVRPPASRISPPPHAVRQATRSAISRSAEPISPIRYIPQNAAIDRRHRAPGSSCPSPSRPSVAKAHTQGCATF PGYFLQTAIIGASSAKTASIIFSIATQEIVMNHHDWCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21282; Mature: 21282
Theoretical pI: Translated: 11.94; Mature: 11.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCALCVVRCASRGYRFRADGQPVAIARRAALPQCTEGKTQRRSAKPVALACASSAHPRG CCHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCHHHHCCCCEEEEECCCCCCCC RMPQKSTASATRHSLLPPGEGARKGRMRVRPPASRISPPPHAVRQATRSAISRSAEPISP CCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCCH IRYIPQNAAIDRRHRAPGSSCPSPSRPSVAKAHTQGCATFPGYFLQTAIIGASSAKTASI HHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHH IFSIATQEIVMNHHDWCE HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRCALCVVRCASRGYRFRADGQPVAIARRAALPQCTEGKTQRRSAKPVALACASSAHPRG CCHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCHHHHCCCCEEEEECCCCCCCC RMPQKSTASATRHSLLPPGEGARKGRMRVRPPASRISPPPHAVRQATRSAISRSAEPISP CCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCCH IRYIPQNAAIDRRHRAPGSSCPSPSRPSVAKAHTQGCATFPGYFLQTAIIGASSAKTASI HHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHH IFSIATQEIVMNHHDWCE HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA