Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is idnK [H]
Identifier: 21244914
GI number: 21244914
Start: 4942163
End: 4942690
Strand: Direct
Name: idnK [H]
Synonym: XAC4197
Alternate gene names: 21244914
Gene position: 4942163-4942690 (Clockwise)
Preceding gene: 21244911
Following gene: 21244915
Centisome position: 95.49
GC content: 65.15
Gene sequence:
>528_bases ATGGGCGTGTCGGGCAGCGGCAAGACCACCATTGCACAAGCGCTGGCAGCGCATTACCGCTTCCGTTTTCTGGACGCAGA CGACTACCACAGCGTGGCAGCACGCGCACAGATGGCGGCCGGCCAACCGCTCACCGACGCTATGCGTCTGCCATGGGTAG AACTGCTGTCGGCCACGCTGCGCGATTGCGTGCAGGCCGGCGAATCGGTGGTGCTGGCCTTCTCCGGTCTGCGTAGCGCG CATCGCCAATTGCTGCGCAACAGCGGCGTGCCGATGCGCTTCGTGTTCCTGCACGCAGCCCCGCACGTGATCGCCGCCCG CCTGAGCACCCGCGCAGGCCACTTCATGCCAGCCACATTGCTCGACAGCCAGCTGCAGACATTGGAGCTGCCGCTGGACG AAGCGGACGTGGTGTCGGTGGACGTGGATGCCAGCGTGCCTGCGGTTGTGCAGGATGCGATCGCACAGCTGGCAGCGATC GATCCTGCCGCAGTGCAACATACTTCACGTGCATCGGAGCGGGTGTAA
Upstream 100 bases:
>100_bases TCCATTCGAATGCCGAATCGATCCAGAGATATAACCTGACGTGATGGACACCGCCACACATGCCACGCCCGCGTCCGCTT CGCCGCTTGCCATCGTGGTG
Downstream 100 bases:
>100_bases GCGGACGCACACGACGTGCGTGATGCCTACGGTGAGTGCCGCCTAGGCCGTTGTGCGTTGTGCGTTGTGCGTTGTGCGTT GTGCGTCACGAGGCTACCGC
Product: gluconokinase
Products: NA
Alternate protein names: Gluconate kinase 1 [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MGVSGSGKTTIAQALAAHYRFRFLDADDYHSVAARAQMAAGQPLTDAMRLPWVELLSATLRDCVQAGESVVLAFSGLRSA HRQLLRNSGVPMRFVFLHAAPHVIAARLSTRAGHFMPATLLDSQLQTLELPLDEADVVSVDVDASVPAVVQDAIAQLAAI DPAAVQHTSRASERV
Sequences:
>Translated_175_residues MGVSGSGKTTIAQALAAHYRFRFLDADDYHSVAARAQMAAGQPLTDAMRLPWVELLSATLRDCVQAGESVVLAFSGLRSA HRQLLRNSGVPMRFVFLHAAPHVIAARLSTRAGHFMPATLLDSQLQTLELPLDEADVVSVDVDASVPAVVQDAIAQLAAI DPAAVQHTSRASERV >Mature_174_residues GVSGSGKTTIAQALAAHYRFRFLDADDYHSVAARAQMAAGQPLTDAMRLPWVELLSATLRDCVQAGESVVLAFSGLRSAH RQLLRNSGVPMRFVFLHAAPHVIAARLSTRAGHFMPATLLDSQLQTLELPLDEADVVSVDVDASVPAVVQDAIAQLAAID PAAVQHTSRASERV
Specific function: Gluconate utilization system GNT-II. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=169, Percent_Identity=39.0532544378698, Blast_Score=113, Evalue=8e-26, Organism=Escherichia coli, GI1790719, Length=161, Percent_Identity=37.888198757764, Blast_Score=115, Evalue=1e-27, Organism=Escherichia coli, GI87082265, Length=155, Percent_Identity=36.1290322580645, Blast_Score=100, Evalue=4e-23, Organism=Caenorhabditis elegans, GI25146487, Length=167, Percent_Identity=40.1197604790419, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6320454, Length=170, Percent_Identity=31.1764705882353, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 18679; Mature: 18547
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSGSGKTTIAQALAAHYRFRFLDADDYHSVAARAQMAAGQPLTDAMRLPWVELLSATL CCCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHH RDCVQAGESVVLAFSGLRSAHRQLLRNSGVPMRFVFLHAAPHVIAARLSTRAGHFMPATL HHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEEHEEHHHHHHHHHHHHHCCCCCCHHHH LDSQLQTLELPLDEADVVSVDVDASVPAVVQDAIAQLAAIDPAAVQHTSRASERV HHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure GVSGSGKTTIAQALAAHYRFRFLDADDYHSVAARAQMAAGQPLTDAMRLPWVELLSATL CCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHH RDCVQAGESVVLAFSGLRSAHRQLLRNSGVPMRFVFLHAAPHVIAARLSTRAGHFMPATL HHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEEHEEHHHHHHHHHHHHHCCCCCCHHHH LDSQLQTLELPLDEADVVSVDVDASVPAVVQDAIAQLAAIDPAAVQHTSRASERV HHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9658018 [H]