Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244902
Identifier: 21244902
GI number: 21244902
Start: 4922594
End: 4923466
Strand: Direct
Name: 21244902
Synonym: XAC4185
Alternate gene names: NA
Gene position: 4922594-4923466 (Clockwise)
Preceding gene: 21244901
Following gene: 21244903
Centisome position: 95.11
GC content: 70.33
Gene sequence:
>873_bases ATGAGCCGGGTCGACGCGCACCTGCATTTCTGGCACCTGGCCCGTGGCGATTACCACTGGCTGACGCCCGAGCTGGCGCC GCTGTACCGCGACTTCGGCCCCGATGACGTCAGCGCTGCGCTGGACGCGGCCGCTGTCGATCACGTGGTGGTGGTGCAGG CGGCCGCCACCGAGGCGGAGACCTGCTACCTGTTCGAGCTGGCCCGCGACGATGCACGCATTGCCGGCGTGGTGGGCTGG GTGGACTTCGCTGCGCCCGATGCCGCTGCACGCATCGGCGCACTGGTGCGCGCCGGCGGCGGCGTGCTCAAGGGCCTGCG CCCGATGGTGCAGGACATCGCCGACGTGCACTGGCTGGCCAGCCCCGCCCTGGATGCCGCCTTCGATGCGCTGCTGGCGC ATGACCTGGCCTTCGATGCGTTGATCCGTGCCGTGCACGTCCCGGCACTGCAGGCGCGCTTGAAGCGCCATCCGGCATTG CGCGTGGTGCTCGATCACGGCGGCAAACCGCAGATTGCGGCCGGCGAATTCGTTGCCTGGGCCGCCGGCATGGCCGCCCT GGCGCAGCATCCCAATGTGCATTGCAAACTGTCCGGGCTGCTGACCGAAGCCGCGCGCGGCGCTGGCATCGACGCGCTGG AGCCGTATGTGGCGCACCTGCTCGCCCGCTTCGGCGCGCAGCGGCTGCTATGGGGCAGCGACTGGCCGGTGCTGCGCTTG CGCGCCGATTACGCGCAATGGTTCGCGCTCGCCCAGCAACTCGTCACCCGGCATGCCGCCGAGCACGCGGCAGCCATCTT CGGCGACAACGCACGCACGTTCTATCGTCTGCCACGGCCGGCGGCCCCCACCCACGGAACCTCATCGGTATGA
Upstream 100 bases:
>100_bases AAGTGCGCTCGGCTGCCACGCGGCTTGCGGCCCCGGTGCCATCCGCATTGTGGCAACGCCTGCGCGATGAGGGTCTGCTC GCTGCGGAGTTGCCCACGCC
Downstream 100 bases:
>100_bases CTGTCTCGATTCCCACCACTCCCAATAACCGCCTGCAGGGCAAGCGCTGCCTGATCACCGCCGCCGGCGCCGGCATCGGG CGCGAAAGCGCGCTGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSRVDAHLHFWHLARGDYHWLTPELAPLYRDFGPDDVSAALDAAAVDHVVVVQAAATEAETCYLFELARDDARIAGVVGW VDFAAPDAAARIGALVRAGGGVLKGLRPMVQDIADVHWLASPALDAAFDALLAHDLAFDALIRAVHVPALQARLKRHPAL RVVLDHGGKPQIAAGEFVAWAAGMAALAQHPNVHCKLSGLLTEAARGAGIDALEPYVAHLLARFGAQRLLWGSDWPVLRL RADYAQWFALAQQLVTRHAAEHAAAIFGDNARTFYRLPRPAAPTHGTSSV
Sequences:
>Translated_290_residues MSRVDAHLHFWHLARGDYHWLTPELAPLYRDFGPDDVSAALDAAAVDHVVVVQAAATEAETCYLFELARDDARIAGVVGW VDFAAPDAAARIGALVRAGGGVLKGLRPMVQDIADVHWLASPALDAAFDALLAHDLAFDALIRAVHVPALQARLKRHPAL RVVLDHGGKPQIAAGEFVAWAAGMAALAQHPNVHCKLSGLLTEAARGAGIDALEPYVAHLLARFGAQRLLWGSDWPVLRL RADYAQWFALAQQLVTRHAAEHAAAIFGDNARTFYRLPRPAAPTHGTSSV >Mature_289_residues SRVDAHLHFWHLARGDYHWLTPELAPLYRDFGPDDVSAALDAAAVDHVVVVQAAATEAETCYLFELARDDARIAGVVGWV DFAAPDAAARIGALVRAGGGVLKGLRPMVQDIADVHWLASPALDAAFDALLAHDLAFDALIRAVHVPALQARLKRHPALR VVLDHGGKPQIAAGEFVAWAAGMAALAQHPNVHCKLSGLLTEAARGAGIDALEPYVAHLLARFGAQRLLWGSDWPVLRLR ADYAQWFALAQQLVTRHAAEHAAAIFGDNARTFYRLPRPAAPTHGTSSV
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 31194; Mature: 31063
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVDAHLHFWHLARGDYHWLTPELAPLYRDFGPDDVSAALDAAAVDHVVVVQAAATEAE CCCCHHHEEEEEEECCCCEECCCHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCCC TCYLFELARDDARIAGVVGWVDFAAPDAAARIGALVRAGGGVLKGLRPMVQDIADVHWLA EEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SPALDAAFDALLAHDLAFDALIRAVHVPALQARLKRHPALRVVLDHGGKPQIAAGEFVAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHH AAGMAALAQHPNVHCKLSGLLTEAARGAGIDALEPYVAHLLARFGAQRLLWGSDWPVLRL HHHHHHHHHCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHEECCCCCCEEEE RADYAQWFALAQQLVTRHAAEHAAAIFGDNARTFYRLPRPAAPTHGTSSV EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure SRVDAHLHFWHLARGDYHWLTPELAPLYRDFGPDDVSAALDAAAVDHVVVVQAAATEAE CCCHHHEEEEEEECCCCEECCCHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCCC TCYLFELARDDARIAGVVGWVDFAAPDAAARIGALVRAGGGVLKGLRPMVQDIADVHWLA EEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SPALDAAFDALLAHDLAFDALIRAVHVPALQARLKRHPALRVVLDHGGKPQIAAGEFVAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHH AAGMAALAQHPNVHCKLSGLLTEAARGAGIDALEPYVAHLLARFGAQRLLWGSDWPVLRL HHHHHHHHHCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHEECCCCCCEEEE RADYAQWFALAQQLVTRHAAEHAAAIFGDNARTFYRLPRPAAPTHGTSSV EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]