| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is ucpA [H]
Identifier: 21244903
GI number: 21244903
Start: 4923463
End: 4924233
Strand: Direct
Name: ucpA [H]
Synonym: XAC4186
Alternate gene names: 21244903
Gene position: 4923463-4924233 (Clockwise)
Preceding gene: 21244902
Following gene: 21244904
Centisome position: 95.13
GC content: 66.67
Gene sequence:
>771_bases ATGACTGTCTCGATTCCCACCACTCCCAATAACCGCCTGCAGGGCAAGCGCTGCCTGATCACCGCCGCCGGCGCCGGCAT CGGGCGCGAAAGCGCGCTGGCCTGCGCACGCGCCGGTGCACAGGTGATCGCCACCGACATCGACGCCGCGGCCTTGCAAG CGCTGGCCGCCGAATCCGATGCCATCACCACCCAGCTGCTCGACGTCACCGACGCTGCGGCGATCAACGCATTGATCGCC GCACACGGCCCGTTCGATGTGCTGTTCAACTGCGCCGGCTTCGTGCATCAGGGCAGCATTCTCGACTGCGACGAGCCGGC GTGGCGCCGCTCGTTCTCGATCAACGTCGATGCGATGTACTACACCTGCAAGGCGGTGTTGCCGGGCATGCTCGAACGCG GCCGCGGCAGCATCATCAACATGTCCTCGGTGGCTTCCAGCATCAAGGGCGTGCCGAACCGCTTCGTGTACGGCGTGACC AAGGCCGCGGTGATCGGCCTGAGCAAGGCGATCGCGGCCGACCACGTGGCGCAGGGCGTACGTTGCAACGCGATCTGCCC GGGCACCATCAAGACGCCGTCGCTGGGCGAGCGCGTCAAGGCCCTGGGTGGCGACGAACAGGCGGTGTGGAAGAGCTTCA CCGACCGCCAGCCGATGGGCCGCCTGGGCGACCCACGCGAGATTGCGCAGCTGGTGGTGTACCTGGCTTCGGACGAATCC TCCTTCACCACCGGCCAGACCCACATCATCGATGGCGGCTGGTCCAACTGA
Upstream 100 bases:
>100_bases GGCATGCCGCCGAGCACGCGGCAGCCATCTTCGGCGACAACGCACGCACGTTCTATCGTCTGCCACGGCCGGCGGCCCCC ACCCACGGAACCTCATCGGT
Downstream 100 bases:
>100_bases GTGCGGCAACGACGCATGCTGCGATCTGTCGCATGTGCCCGCCTCGAGATGCGCACACCGTCCCTACCCACCCGATGCAT GCGCGCTAGGTTTGCTAGCC
Product: oxidoreductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTVSIPTTPNNRLQGKRCLITAAGAGIGRESALACARAGAQVIATDIDAAALQALAAESDAITTQLLDVTDAAAINALIA AHGPFDVLFNCAGFVHQGSILDCDEPAWRRSFSINVDAMYYTCKAVLPGMLERGRGSIINMSSVASSIKGVPNRFVYGVT KAAVIGLSKAIAADHVAQGVRCNAICPGTIKTPSLGERVKALGGDEQAVWKSFTDRQPMGRLGDPREIAQLVVYLASDES SFTTGQTHIIDGGWSN
Sequences:
>Translated_256_residues MTVSIPTTPNNRLQGKRCLITAAGAGIGRESALACARAGAQVIATDIDAAALQALAAESDAITTQLLDVTDAAAINALIA AHGPFDVLFNCAGFVHQGSILDCDEPAWRRSFSINVDAMYYTCKAVLPGMLERGRGSIINMSSVASSIKGVPNRFVYGVT KAAVIGLSKAIAADHVAQGVRCNAICPGTIKTPSLGERVKALGGDEQAVWKSFTDRQPMGRLGDPREIAQLVVYLASDES SFTTGQTHIIDGGWSN >Mature_255_residues TVSIPTTPNNRLQGKRCLITAAGAGIGRESALACARAGAQVIATDIDAAALQALAAESDAITTQLLDVTDAAAINALIAA HGPFDVLFNCAGFVHQGSILDCDEPAWRRSFSINVDAMYYTCKAVLPGMLERGRGSIINMSSVASSIKGVPNRFVYGVTK AAVIGLSKAIAADHVAQGVRCNAICPGTIKTPSLGERVKALGGDEQAVWKSFTDRQPMGRLGDPREIAQLVVYLASDESS FTTGQTHIIDGGWSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI66933014, Length=244, Percent_Identity=55.327868852459, Blast_Score=248, Evalue=3e-66, Organism=Homo sapiens, GI15277342, Length=270, Percent_Identity=32.2222222222222, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=32.5301204819277, Blast_Score=117, Evalue=8e-27, Organism=Homo sapiens, GI32483357, Length=256, Percent_Identity=32.8125, Blast_Score=111, Evalue=7e-25, Organism=Homo sapiens, GI59889578, Length=227, Percent_Identity=33.920704845815, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI126723750, Length=259, Percent_Identity=29.7297297297297, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=24.9027237354086, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI40254992, Length=245, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI5031737, Length=264, Percent_Identity=28.7878787878788, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI142976729, Length=204, Percent_Identity=29.9019607843137, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI210032110, Length=196, Percent_Identity=27.0408163265306, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI40807363, Length=204, Percent_Identity=27.9411764705882, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI10190704, Length=254, Percent_Identity=29.5275590551181, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI20149619, Length=194, Percent_Identity=28.8659793814433, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI126723191, Length=188, Percent_Identity=31.3829787234043, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI210032112, Length=188, Percent_Identity=25.531914893617, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI31542939, Length=245, Percent_Identity=28.9795918367347, Blast_Score=68, Evalue=7e-12, Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=38.4920634920635, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1787335, Length=250, Percent_Identity=32.8, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=33.739837398374, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=29.0196078431373, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=32.8, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1789378, Length=255, Percent_Identity=32.156862745098, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1787905, Length=257, Percent_Identity=32.295719844358, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1789208, Length=251, Percent_Identity=28.6852589641434, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI2367175, Length=254, Percent_Identity=30.3149606299213, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI87082160, Length=258, Percent_Identity=25.1937984496124, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI2367365, Length=245, Percent_Identity=30.2040816326531, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787820, Length=184, Percent_Identity=34.2391304347826, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1786701, Length=184, Percent_Identity=28.804347826087, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787526, Length=247, Percent_Identity=28.3400809716599, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=30.4, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI115534694, Length=259, Percent_Identity=31.6602316602317, Blast_Score=116, Evalue=9e-27, Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=30.9433962264151, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=31.0756972111554, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=31.8181818181818, Blast_Score=114, Evalue=7e-26, Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=29.8039215686275, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17561402, Length=268, Percent_Identity=34.7014925373134, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=31.2977099236641, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=30.5343511450382, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17555706, Length=249, Percent_Identity=29.718875502008, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=30.7116104868914, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=30.1526717557252, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=29.3893129770992, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=27.4436090225564, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=29.3233082706767, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17559104, Length=270, Percent_Identity=28.8888888888889, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17560220, Length=270, Percent_Identity=31.4814814814815, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17564282, Length=196, Percent_Identity=31.6326530612245, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=29.2592592592593, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI193203117, Length=191, Percent_Identity=29.3193717277487, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=27.9850746268657, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=29.3650793650794, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=29.4736842105263, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17538480, Length=272, Percent_Identity=30.8823529411765, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17538486, Length=264, Percent_Identity=29.9242424242424, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17551412, Length=268, Percent_Identity=28.7313432835821, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17508895, Length=195, Percent_Identity=31.2820512820513, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17538182, Length=260, Percent_Identity=29.2307692307692, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17565030, Length=271, Percent_Identity=28.0442804428044, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=25.5639097744361, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17568967, Length=193, Percent_Identity=27.4611398963731, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17536651, Length=260, Percent_Identity=25.3846153846154, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=237, Percent_Identity=27.8481012658228, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=149, Percent_Identity=32.2147651006711, Blast_Score=66, Evalue=6e-12, Organism=Drosophila melanogaster, GI23397609, Length=248, Percent_Identity=33.8709677419355, Blast_Score=121, Evalue=4e-28, Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=32.2709163346614, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=30.1587301587302, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=29.9212598425197, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI28571526, Length=254, Percent_Identity=31.496062992126, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI21355319, Length=253, Percent_Identity=31.6205533596838, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24644337, Length=176, Percent_Identity=35.7954545454545, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=30.2040816326531, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI18859837, Length=190, Percent_Identity=31.0526315789474, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI281364892, Length=192, Percent_Identity=34.375, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI17737361, Length=258, Percent_Identity=30.2325581395349, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24640492, Length=258, Percent_Identity=27.5193798449612, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581726, Length=199, Percent_Identity=31.1557788944724, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221510726, Length=204, Percent_Identity=27.9411764705882, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26777; Mature: 26646
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSIPTTPNNRLQGKRCLITAAGAGIGRESALACARAGAQVIATDIDAAALQALAAESD CEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCH AITTQLLDVTDAAAINALIAAHGPFDVLFNCAGFVHQGSILDCDEPAWRRSFSINVDAMY HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCHHHHCEEEEEEHHHH YTCKAVLPGMLERGRGSIINMSSVASSIKGVPNRFVYGVTKAAVIGLSKAIAADHVAQGV HHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RCNAICPGTIKTPSLGERVKALGGDEQAVWKSFTDRQPMGRLGDPREIAQLVVYLASDES EECEECCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC SFTTGQTHIIDGGWSN CCCCCCEEEECCCCCC >Mature Secondary Structure TVSIPTTPNNRLQGKRCLITAAGAGIGRESALACARAGAQVIATDIDAAALQALAAESD EEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCH AITTQLLDVTDAAAINALIAAHGPFDVLFNCAGFVHQGSILDCDEPAWRRSFSINVDAMY HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCHHHHCEEEEEEHHHH YTCKAVLPGMLERGRGSIINMSSVASSIKGVPNRFVYGVTKAAVIGLSKAIAADHVAQGV HHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RCNAICPGTIKTPSLGERVKALGGDEQAVWKSFTDRQPMGRLGDPREIAQLVVYLASDES EECEECCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC SFTTGQTHIIDGGWSN CCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]