Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244752
Identifier: 21244752
GI number: 21244752
Start: 4725019
End: 4725900
Strand: Direct
Name: 21244752
Synonym: XAC4035
Alternate gene names: NA
Gene position: 4725019-4725900 (Clockwise)
Preceding gene: 21244744
Following gene: 21244754
Centisome position: 91.29
GC content: 69.5
Gene sequence:
>882_bases ATGCACTATCGATGGACGCTGCTCACGCTGGCGGCAAGTTTACTCTGCGTCCCGTCCGCTTCGGGGCTTGCTGAATTCGG CATCGAGGGCATGGGTGTGGTCTCCACGCCGGCCAACGAGGCACGCGCCACGCTCAGCCCGGACGGACAGCGCATCGTTT GGGCCAGCGACCGGACCGGTGGCACCGGCGGCTGGGATCTGTGGCAGGCGCAGCTGCGCGGCGGGCGCTGGCAGGACGCG CAGCCGCTGCCGATCAATACCGCGCAGGACGAGACCACCCCATTGTTCAGTGCCGACGGCCGCTGGCTGCTGTTCGCCTC CACCCGGCCAGGCGGCGCGGGCGGCAGCGACCTGTACCGTGCACCGGTGGATGCGCAAGGCGCCGTCGGCCCGGTGCAAT CGCTGGGCGCAGCGATCGACAGCGCCGGCAACGAGCGCGCACCGACGCTGTCGCTGGACGGCACACGCCTGCTGTTCGCC AGCGACGGGCATGGCGGTGCTGGCGGCATGGATCTATTCGTCGCGCACTGGGATGGGCAGGCGTTCACTGCGCCGGTGGC CTTGGTCGACATCAACAGCGCAGCCGACGAGCTGGACGCCGCCTGGCTCGGCGACGGGCGCGCGCTGGTATGGGCGCGCG GGAAGACCGATGACCCCAGCCAGTTGCTGCTGGCCATCTGCAAGGACGGGCATTTTGTACAGGGCTCGCCGCTGCCGCTG TCGTTCAACGGGCCGCAGGAGCGCACTTTCGGCGCGGTCGTGGATACGGCCAAGCCCGGCGAATTGCTGGTGACCGGCAG TGCTCGCGCGCCGCGCGCAGGGCAGTTGGACATTTACCGGATGAAGGCACCGGCAGCCGATGGCGATGCGAGTTGCCGTT GA
Upstream 100 bases:
>100_bases GGGGTGACCGAATACGGCATAACGGGAGACGGGCATGAAACGCTCTCTGGTTGACTAGACTGTGCGCGACTTAGAGCCGC TCTTGAGGCAGGAACACCGC
Downstream 100 bases:
>100_bases GGTGGATGGGTGCATCGGTCAGATCGAGAAGATGTTATCTGGGCATTCGCCGCAGAGCTGCTGATCGCCTCCGATGAGGT GACTAGCAAGCCGTGCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: OmpA Family Protein; Ompa/Motb Domain Protein; OmpA/MotB Domain-Containing Protein; OmpA Family Outer Membrane Protein; OmpA/MotB Family Outer Membrane Protein; WD40 Domain-Containing Protein Beta Propeller; Outer Membrane Protein; Outer Membrane Protein OmpA Family Protein; Beta Propeller Repeat-Containing Protein; Peptidoglycan-Associated Lipoprotein; OmpA Family Peptidoglycan-Associated Lipoprotein
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MHYRWTLLTLAASLLCVPSASGLAEFGIEGMGVVSTPANEARATLSPDGQRIVWASDRTGGTGGWDLWQAQLRGGRWQDA QPLPINTAQDETTPLFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDGTRLLFA SDGHGGAGGMDLFVAHWDGQAFTAPVALVDINSAADELDAAWLGDGRALVWARGKTDDPSQLLLAICKDGHFVQGSPLPL SFNGPQERTFGAVVDTAKPGELLVTGSARAPRAGQLDIYRMKAPAADGDASCR
Sequences:
>Translated_293_residues MHYRWTLLTLAASLLCVPSASGLAEFGIEGMGVVSTPANEARATLSPDGQRIVWASDRTGGTGGWDLWQAQLRGGRWQDA QPLPINTAQDETTPLFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDGTRLLFA SDGHGGAGGMDLFVAHWDGQAFTAPVALVDINSAADELDAAWLGDGRALVWARGKTDDPSQLLLAICKDGHFVQGSPLPL SFNGPQERTFGAVVDTAKPGELLVTGSARAPRAGQLDIYRMKAPAADGDASCR >Mature_293_residues MHYRWTLLTLAASLLCVPSASGLAEFGIEGMGVVSTPANEARATLSPDGQRIVWASDRTGGTGGWDLWQAQLRGGRWQDA QPLPINTAQDETTPLFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDGTRLLFA SDGHGGAGGMDLFVAHWDGQAFTAPVALVDINSAADELDAAWLGDGRALVWARGKTDDPSQLLLAICKDGHFVQGSPLPL SFNGPQERTFGAVVDTAKPGELLVTGSARAPRAGQLDIYRMKAPAADGDASCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30492; Mature: 30492
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYRWTLLTLAASLLCVPSASGLAEFGIEGMGVVSTPANEARATLSPDGQRIVWASDRTG CCEEEHHHHHHHHHHCCCCCCCHHHHCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCC GTGGWDLWQAQLRGGRWQDAQPLPINTAQDETTPLFSADGRWLLFASTRPGGAGGSDLYR CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCEE APVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDGTRLLFASDGHGGAGGMDLFVAHWDGQ CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCCCCCCEEEEEEEECCC AFTAPVALVDINSAADELDAAWLGDGRALVWARGKTDDPSQLLLAICKDGHFVQGSPLPL EEECCEEEEECCCCHHHHCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCEE SFNGPQERTFGAVVDTAKPGELLVTGSARAPRAGQLDIYRMKAPAADGDASCR ECCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MHYRWTLLTLAASLLCVPSASGLAEFGIEGMGVVSTPANEARATLSPDGQRIVWASDRTG CCEEEHHHHHHHHHHCCCCCCCHHHHCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCC GTGGWDLWQAQLRGGRWQDAQPLPINTAQDETTPLFSADGRWLLFASTRPGGAGGSDLYR CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCEE APVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDGTRLLFASDGHGGAGGMDLFVAHWDGQ CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCCCCCCEEEEEEEECCC AFTAPVALVDINSAADELDAAWLGDGRALVWARGKTDDPSQLLLAICKDGHFVQGSPLPL EEECCEEEEECCCCHHHHCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCEE SFNGPQERTFGAVVDTAKPGELLVTGSARAPRAGQLDIYRMKAPAADGDASCR ECCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA