Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is xpsG [H]
Identifier: 21244267
GI number: 21244267
Start: 4185791
End: 4186222
Strand: Reverse
Name: xpsG [H]
Synonym: XAC3542
Alternate gene names: 21244267
Gene position: 4186222-4185791 (Counterclockwise)
Preceding gene: 21244268
Following gene: 21244266
Centisome position: 80.88
GC content: 63.43
Gene sequence:
>432_bases ATGATCAAGCGTTCCATCACCCGCAGTCCGTCGCGCGCAGGCCAGGCCGGCATGAGCTTGCTGGAAATCATCATCGTCAT CGTGCTGATCGGTGCGGTGCTCACGCTGGTCGGCAGTCGCGTGCTTGGCGGTGCCGATCGCGGCAAGGCCAATCTGGCCA AGTCGCAGATCCAGACGCTGGCCGGCAAGATCGAGAATTTCCAGCTCGACACCGGCAAGTTGCCGAGCAAACTCGATGAC CTGGTCACCCAGCCCGGCGACAGCAGCGGTTGGCTGGGCCCGTACGTCAAGCCGGCCGAACTCAACGACCCATGGGGCCA CGCCATCGAATACCGTGCGCCCGGCGACGGTCAGCCGTTCGATCTGATCAGCCTGGGCAAGGACGGCAAGCCCGGCGGCA GCAGTTACGACGCGGACATCAAGTACCAATAA
Upstream 100 bases:
>100_bases GTTCCGGTGACCGCACGACACCCAAGCGGGAACCATTGCAATGCCCGCCGTGTCATCTGTTGGCGGCAGCATCCCTCATC GACGTGCAAGGAAATCGTTC
Downstream 100 bases:
>100_bases GCGCTCGCCATGCGCGTTGCGCGTCAGCCGTTGCGTCATCGGCATGGAGTGGTCGGCCCTGGTCGGGCACGCGCGCGTGG CACCTCGTTGCTGGAGATGC
Product: general secretion pathway protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MIKRSITRSPSRAGQAGMSLLEIIIVIVLIGAVLTLVGSRVLGGADRGKANLAKSQIQTLAGKIENFQLDTGKLPSKLDD LVTQPGDSSGWLGPYVKPAELNDPWGHAIEYRAPGDGQPFDLISLGKDGKPGGSSYDADIKYQ
Sequences:
>Translated_143_residues MIKRSITRSPSRAGQAGMSLLEIIIVIVLIGAVLTLVGSRVLGGADRGKANLAKSQIQTLAGKIENFQLDTGKLPSKLDD LVTQPGDSSGWLGPYVKPAELNDPWGHAIEYRAPGDGQPFDLISLGKDGKPGGSSYDADIKYQ >Mature_143_residues MIKRSITRSPSRAGQAGMSLLEIIIVIVLIGAVLTLVGSRVLGGADRGKANLAKSQIQTLAGKIENFQLDTGKLPSKLDD LVTQPGDSSGWLGPYVKPAELNDPWGHAIEYRAPGDGQPFDLISLGKDGKPGGSSYDADIKYQ
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP G family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000983 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR013545 - InterPro: IPR010054 [H]
Pfam domain/function: PF08334 GSPII_G [H]
EC number: NA
Molecular weight: Translated: 15130; Mature: 15130
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRSITRSPSRAGQAGMSLLEIIIVIVLIGAVLTLVGSRVLGGADRGKANLAKSQIQTL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AGKIENFQLDTGKLPSKLDDLVTQPGDSSGWLGPYVKPAELNDPWGHAIEYRAPGDGQPF HHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCE DLISLGKDGKPGGSSYDADIKYQ EEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIKRSITRSPSRAGQAGMSLLEIIIVIVLIGAVLTLVGSRVLGGADRGKANLAKSQIQTL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AGKIENFQLDTGKLPSKLDDLVTQPGDSSGWLGPYVKPAELNDPWGHAIEYRAPGDGQPF HHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCE DLISLGKDGKPGGSSYDADIKYQ EEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1944223; 12024217 [H]