Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244258
Identifier: 21244258
GI number: 21244258
Start: 4177331
End: 4178242
Strand: Reverse
Name: 21244258
Synonym: XAC3533
Alternate gene names: NA
Gene position: 4178242-4177331 (Counterclockwise)
Preceding gene: 21244259
Following gene: 21244252
Centisome position: 80.73
GC content: 67.54
Gene sequence:
>912_bases TTGTCAAAAGTGGGTTCCTTACCCGTAGAATGTAATTCCTGCAAAAAAATCTTTATAGTTTTCAGTTCGCGTGGAGCGTG GATGCCCCCAATCGTCTTGCTCTCAGTCGGCACCGACGACGAGGCGCTGGATGCGTGCCTGGGCGCATTGGATGCGGCCA CGCCCGCAGGAACACGCGTCTGGCTGGCCGATGATGCGCAGGCCGGCCCGCGTGGGCGCGCAGTGATCGAACATTGGCTG GCGCGCACGCAGTTGCAGGCCCATCACACCCGTCGCCAGCGCATGCTGGGCGAGGTAGCGCATCTGGACGAAATGCTCAG CGCCTGCGGCGATGCCGACGTGGTGGTGCTGGGCTTGGATGCCTGCCCGTTGCCCGGATGGTTGCGGCAGCTGACCGCGT GTTTTGCACGCGATGCCGCGATCGCCACCGCCACGCCATGGAGCAATGTGGGCGAGGCCTGCAGCTGGCCGCGGCTGGGC GAACTCAACCCGATGCCGGATGCGCCCGAGCGGCTTGCGGCTGCCTGTGCTGCGATGCCGCCGCTGCACCCGGAACTGCC GTCGGCGATCGGGCACGCGGTGCTGTTGCGCGGAACCGCGCGGCGCAAGGCCGGTGGCCTTGACGCCAGCAGTTACGGCT CGTGGTACGCGGCACTGGTGGACTTGAGCCTGCGCATGGCTGGGCTGGGCTGGCGTAACGTGTTGTGCGAGACCGCCTTC GTTGCCTCCCCGCACGAAGGCCGCCCGGCCGAAGGCGACATGGACGCGCTGGCCACACGCTGGCCGGCCTGGCATGCGCG CCTGGCCAACTTCCTCATGCACGACCCGTTGCGCGCGCAGCGCGACCAGCTGACTCGCCTCCTGGCGCACCTGCCGCCAC CGGACCTGCAACGCGCCTTGTTCGAGGCCTAG
Upstream 100 bases:
>100_bases CTACTCGCTTGCTTTATAGCAAGTGTGTGTTTGTTGGGTATCAATCCAAGCGGCCAAATTTTTACGACCCAAATTGGTAT GAGGTTACTGCGGCCTACAC
Downstream 100 bases:
>100_bases CGTCGCCGCCGACGAGACCTGCGCGCCGCCAGGCGCGCGGCTATCGTCCGGGATTGACATGGATCACGCATGCACGAAGG CGTTTGTCATCCGACCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; DTDP-Rhamnosyl Transferase RfbF
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSKVGSLPVECNSCKKIFIVFSSRGAWMPPIVLLSVGTDDEALDACLGALDAATPAGTRVWLADDAQAGPRGRAVIEHWL ARTQLQAHHTRRQRMLGEVAHLDEMLSACGDADVVVLGLDACPLPGWLRQLTACFARDAAIATATPWSNVGEACSWPRLG ELNPMPDAPERLAAACAAMPPLHPELPSAIGHAVLLRGTARRKAGGLDASSYGSWYAALVDLSLRMAGLGWRNVLCETAF VASPHEGRPAEGDMDALATRWPAWHARLANFLMHDPLRAQRDQLTRLLAHLPPPDLQRALFEA
Sequences:
>Translated_303_residues MSKVGSLPVECNSCKKIFIVFSSRGAWMPPIVLLSVGTDDEALDACLGALDAATPAGTRVWLADDAQAGPRGRAVIEHWL ARTQLQAHHTRRQRMLGEVAHLDEMLSACGDADVVVLGLDACPLPGWLRQLTACFARDAAIATATPWSNVGEACSWPRLG ELNPMPDAPERLAAACAAMPPLHPELPSAIGHAVLLRGTARRKAGGLDASSYGSWYAALVDLSLRMAGLGWRNVLCETAF VASPHEGRPAEGDMDALATRWPAWHARLANFLMHDPLRAQRDQLTRLLAHLPPPDLQRALFEA >Mature_302_residues SKVGSLPVECNSCKKIFIVFSSRGAWMPPIVLLSVGTDDEALDACLGALDAATPAGTRVWLADDAQAGPRGRAVIEHWLA RTQLQAHHTRRQRMLGEVAHLDEMLSACGDADVVVLGLDACPLPGWLRQLTACFARDAAIATATPWSNVGEACSWPRLGE LNPMPDAPERLAAACAAMPPLHPELPSAIGHAVLLRGTARRKAGGLDASSYGSWYAALVDLSLRMAGLGWRNVLCETAFV ASPHEGRPAEGDMDALATRWPAWHARLANFLMHDPLRAQRDQLTRLLAHLPPPDLQRALFEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32646; Mature: 32515
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVGSLPVECNSCKKIFIVFSSRGAWMPPIVLLSVGTDDEALDACLGALDAATPAGTRV CCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEE WLADDAQAGPRGRAVIEHWLARTQLQAHHTRRQRMLGEVAHLDEMLSACGDADVVVLGLD EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC ACPLPGWLRQLTACFARDAAIATATPWSNVGEACSWPRLGELNPMPDAPERLAAACAAMP CCCCCHHHHHHHHHHHHCCHHEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC PLHPELPSAIGHAVLLRGTARRKAGGLDASSYGSWYAALVDLSLRMAGLGWRNVLCETAF CCCCHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VASPHEGRPAEGDMDALATRWPAWHARLANFLMHDPLRAQRDQLTRLLAHLPPPDLQRAL HCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH FEA HCC >Mature Secondary Structure SKVGSLPVECNSCKKIFIVFSSRGAWMPPIVLLSVGTDDEALDACLGALDAATPAGTRV CCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEE WLADDAQAGPRGRAVIEHWLARTQLQAHHTRRQRMLGEVAHLDEMLSACGDADVVVLGLD EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC ACPLPGWLRQLTACFARDAAIATATPWSNVGEACSWPRLGELNPMPDAPERLAAACAAMP CCCCCHHHHHHHHHHHHCCHHEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC PLHPELPSAIGHAVLLRGTARRKAGGLDASSYGSWYAALVDLSLRMAGLGWRNVLCETAF CCCCHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VASPHEGRPAEGDMDALATRWPAWHARLANFLMHDPLRAQRDQLTRLLAHLPPPDLQRAL HCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH FEA HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA