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The map label for this gene is tdcF [C]

Identifier: 21244149

GI number: 21244149

Start: 4031257

End: 4031760

Strand: Reverse

Name: tdcF [C]

Synonym: XAC3424

Alternate gene names: 21244149

Gene position: 4031760-4031257 (Counterclockwise)

Preceding gene: 21244150

Following gene: 21244148

Centisome position: 77.9

GC content: 60.52

Gene sequence:

>504_bases
ATGCCACGTTCCATCACGACCGTTCTTAGCGCCGCAGTAGTGTGGGCTGCCGGTCTCGGTGCCGCGCACGCCGCCGAGGT
GATCCGCCACAAGATTCCCAACAGCGATTTCCCAATTGCTGCTGCGGTGGAAATTCCCGCCGGCAAGGCCACGGTGTATG
TCAGCGGCAAGGTGCCGGCGGTGATCGATACCAATGCGCCCAAGGATTCCGCTGCTGCCTATGGCGATACCAAGGCGCAA
ACGGTGAGCGTGTTGAACCAGATCAAGCAGCAGCTAACCACGCTGGGGTTGGGCATGGGCGATGTGGTGAAGATGCAGGT
GTTTCTGGTCGGCGATCCGGCGATGGGCGGCAAGATGGATTTCAACGGCTTCATGGAAGGGTATCGCCAGTTCTTCGGCA
CCAAGGAGCAACCCAATCTGCCAGCGCGCTCGGCATTCCAGATCGCGGCATTGGGTAACCCGCTGTACCGGGTCGAGATC
GAAGTTGTTGCCGTGCGTCCCTGA

Upstream 100 bases:

>100_bases
TTATGTGCGCACGCACTTCGGTAACGACTATGCCGAGCGCGTGACCATCGACGACGTCAAATCGCTCCGCCGCTGATCTT
CTCTCCTACAAGGAATTGCC

Downstream 100 bases:

>100_bases
GTCCGCGTCTTCATCCTGCTGGAGTTTGTCATGAACACTGCTCTTTCGCGCCGCACGTTTCTACGCGACTCCGCGCTGTT
TGCCGGCGCCGCCGGTGCCG

Product: TdcF protein

Products: NA

Alternate protein names: TdcF Protein; Translation Initiation Inhibitor; Endoribonuclease; Endoribonuclease L-PSP Family; Endonuclease L-PSP Endoribonuclease; Endoribonuclease L-Psp; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-PSP Superfamily

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MPRSITTVLSAAVVWAAGLGAAHAAEVIRHKIPNSDFPIAAAVEIPAGKATVYVSGKVPAVIDTNAPKDSAAAYGDTKAQ
TVSVLNQIKQQLTTLGLGMGDVVKMQVFLVGDPAMGGKMDFNGFMEGYRQFFGTKEQPNLPARSAFQIAALGNPLYRVEI
EVVAVRP

Sequences:

>Translated_167_residues
MPRSITTVLSAAVVWAAGLGAAHAAEVIRHKIPNSDFPIAAAVEIPAGKATVYVSGKVPAVIDTNAPKDSAAAYGDTKAQ
TVSVLNQIKQQLTTLGLGMGDVVKMQVFLVGDPAMGGKMDFNGFMEGYRQFFGTKEQPNLPARSAFQIAALGNPLYRVEI
EVVAVRP
>Mature_166_residues
PRSITTVLSAAVVWAAGLGAAHAAEVIRHKIPNSDFPIAAAVEIPAGKATVYVSGKVPAVIDTNAPKDSAAAYGDTKAQT
VSVLNQIKQQLTTLGLGMGDVVKMQVFLVGDPAMGGKMDFNGFMEGYRQFFGTKEQPNLPARSAFQIAALGNPLYRVEIE
VVAVRP

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17584; Mature: 17452

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSITTVLSAAVVWAAGLGAAHAAEVIRHKIPNSDFPIAAAVEIPAGKATVYVSGKVPA
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCE
VIDTNAPKDSAAAYGDTKAQTVSVLNQIKQQLTTLGLGMGDVVKMQVFLVGDPAMGGKMD
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCC
FNGFMEGYRQFFGTKEQPNLPARSAFQIAALGNPLYRVEIEVVAVRP
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEECC
>Mature Secondary Structure 
PRSITTVLSAAVVWAAGLGAAHAAEVIRHKIPNSDFPIAAAVEIPAGKATVYVSGKVPA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCE
VIDTNAPKDSAAAYGDTKAQTVSVLNQIKQQLTTLGLGMGDVVKMQVFLVGDPAMGGKMD
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCC
FNGFMEGYRQFFGTKEQPNLPARSAFQIAALGNPLYRVEIEVVAVRP
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA