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The map label for this gene is 21244150

Identifier: 21244150

GI number: 21244150

Start: 4031785

End: 4032210

Strand: Reverse

Name: 21244150

Synonym: XAC3425

Alternate gene names: NA

Gene position: 4032210-4031785 (Counterclockwise)

Preceding gene: 21244151

Following gene: 21244149

Centisome position: 77.91

GC content: 65.96

Gene sequence:

>426_bases
ATGAGTCTGCTGCCAAGAGCGTGCGGCGCCACGGTTGCGCTCGCCATTCTCGCCTTGTTGCTGCCGCCCAACGTGCGCGA
TGCGCAGGCGCAGAGTTCCGATGCCACGCAGTTGTTTCCGCAGCAAGGCTTCGCCAAGGCCTCCGGTCAGGACGTTTACC
AGGCCATCTGCCAGGGCTGCCATATGCCGGCCGGCCGTGGCGCGCAAGGTGCCGGCGACTATCCTGCGCTTGCCGGCAAC
CCCAAGCTGGCTGCCGGCCCGTACGTGACCATGATGGTGCTCGACGGCCACGCGGGGATGCCGGGTTTCGCCGACATGCT
CGACGACCGCCAGGTGGCCGAAGTGGTGAGTTATGTGCGCACGCACTTCGGTAACGACTATGCCGAGCGCGTGACCATCG
ACGACGTCAAATCGCTCCGCCGCTGA

Upstream 100 bases:

>100_bases
ACGTGTCGTACATCCCGGCCTGGCAGGAGGGTGCCATCCTGTCGGCACACGATGTGGTTGGCCGCCTGCATCGCAAGGTC
ATTGCCCAGGGAGCGCGCGC

Downstream 100 bases:

>100_bases
TCTTCTCTCCTACAAGGAATTGCCATGCCACGTTCCATCACGACCGTTCTTAGCGCCGCAGTAGTGTGGGCTGCCGGTCT
CGGTGCCGCGCACGCCGCCG

Product: cytochrome C6

Products: NA

Alternate protein names: Gluconate 2-Dehydrogenase; Cytochrome C Family Protein; Cytochrome C; TdcF Protein

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSLLPRACGATVALAILALLLPPNVRDAQAQSSDATQLFPQQGFAKASGQDVYQAICQGCHMPAGRGAQGAGDYPALAGN
PKLAAGPYVTMMVLDGHAGMPGFADMLDDRQVAEVVSYVRTHFGNDYAERVTIDDVKSLRR

Sequences:

>Translated_141_residues
MSLLPRACGATVALAILALLLPPNVRDAQAQSSDATQLFPQQGFAKASGQDVYQAICQGCHMPAGRGAQGAGDYPALAGN
PKLAAGPYVTMMVLDGHAGMPGFADMLDDRQVAEVVSYVRTHFGNDYAERVTIDDVKSLRR
>Mature_140_residues
SLLPRACGATVALAILALLLPPNVRDAQAQSSDATQLFPQQGFAKASGQDVYQAICQGCHMPAGRGAQGAGDYPALAGNP
KLAAGPYVTMMVLDGHAGMPGFADMLDDRQVAEVVSYVRTHFGNDYAERVTIDDVKSLRR

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14878; Mature: 14747

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLPRACGATVALAILALLLPPNVRDAQAQSSDATQLFPQQGFAKASGQDVYQAICQGC
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHC
HMPAGRGAQGAGDYPALAGNPKLAAGPYVTMMVLDGHAGMPGFADMLDDRQVAEVVSYVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHH
THFGNDYAERVTIDDVKSLRR
HHHCCHHHHHCCHHHHHHHCC
>Mature Secondary Structure 
SLLPRACGATVALAILALLLPPNVRDAQAQSSDATQLFPQQGFAKASGQDVYQAICQGC
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHC
HMPAGRGAQGAGDYPALAGNPKLAAGPYVTMMVLDGHAGMPGFADMLDDRQVAEVVSYVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHH
THFGNDYAERVTIDDVKSLRR
HHHCCHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA