Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244075
Identifier: 21244075
GI number: 21244075
Start: 3946194
End: 3949040
Strand: Reverse
Name: 21244075
Synonym: XAC3350
Alternate gene names: NA
Gene position: 3949040-3946194 (Counterclockwise)
Preceding gene: 21244076
Following gene: 21244074
Centisome position: 76.3
GC content: 67.9
Gene sequence:
>2847_bases TTGGAAACGATAATCGTGTTGGTGGCCCTGGTGCTACTCGCCGTGCCGGTGGGTGTGGTGATCGCGCTGGTGTGGATTGC CGGGCTGCGGCGACGGGTGGCGGCGCTGGAGCAGCGGCTTGCGCAGTGGCAGAGCAGTGGTGCCGGGCCTGCGGATGCGC CGGCGCAAGCACCCACGGACGCGCAGGGCAGGGCGTGGGAGCAACCGGACGTGGCGTCCGATGTAGGCGCTGGTCCGGGC GCCGTCGCCGACAGCGATCTACCTGGGTACCGCACGTCCGTTGCAGCGGGTCAGGACGTTGGCTCGCATGCGCCGGCTGC GGATCACCAGGCGGTTGGTGGGTCTGCCTCGGCGGTGCCGCCGCCATTGCCGGCGCAGGCACCTGCAGATGCGATGGCGG GCAGTGCAAGCGCGACGTCGGAACGTCCCAGCGCGCAAGCGCAGGCGACGCGCGCCCAGTCGGCGCAACTGCAATCCGCA CAACCGCAACCGCCTCGGCTTCCGGCCGCGCCCAGCGCCATCGCGCGCGCGGCCAGCGCCTTGAAGCGTTGGTTCACCGA GGGCAATGTGCCGGTCAAGGTCGGCATGCTGGTCTTGTTGGCGGGCGTGGCGTCGCTGTTGAAGTACGCCAGCGATCAGG GCTGGATGCGCATGCCGACCGAGCTGCGCTTGGCCGGCATCAGCGTTCTGGCATTGGCCGGTCTGATCTTCGGTTGGACG CAGCGCGCGCAGCGGCCGGGGTTTGCGTTGGCGTTGCAGGGCGGCGCCATCGGTGGCCTGTTGTTGACGGTGTTCGCGGC CTTCAAGTTGTACGGCTTGCTCGATGCCGGAACGGCGCTGGGCATCAGCGTGGTGCTGATCGCAGGTATGTGCGTGCTGG CGGTGCTGCAGGATTCGCGCACATTGGCGGTGCTGGGCGTGCTGGCCGGTTTTCTTGCGCCGATCTGGTTGTCTACCGGC AGCGGCAACCATGTCGCGCTGTTCTCGTACTACGCCGTACTCAACGCCGGTATCGTGGCGATTGCATGGACACGCCCGTG GCGCGTGCTGAACCTGCTGGGGTTTGCTTTCACCTTCGGCATCGGCACCGCGTGGGGAGCGCTGCAGTACTCCCCGGCAA AATTCGCCACGACCGAGCCGTTCCTGTTGCTGTTCTTCGCCATGTACGTGGCGATTCCGGTCCTGCATGCGCGCCGCGGC GACGTTAGTGCCGGCAGGCTCATCGATGGCAGCCTGTTGTTCGGAACGCCGCTGGTGGCCTTCGCGTTACAGGCGCGCCT GCTCGAGGGCGATCGGCTGCCACTGGCGTTGTGCGCGGTGGCGGTGGCCGCGTTGTACGCGGGCCTGGGCAGTTGGCTGC TGCGCCGCGCATCCACGCGCTTGCTGGGCCAGGCGCACGCGATGCTGGCGGTCGGGTTCGCAACCCTGGCCGTACCGCTG GCGTTGTCGGCACGTGCCACTGCGAGCGTGTTTGCGCTGGAAGGCGTCGGTTTGCTGTGGCTGGCGCTTCGCCAACAACG GTGGATCTCGCAGGTCAGCGGTGTCGCGCTGCAGGTGTTTGCGGCGGTGGGTGTCGCGTTCGGTGTGGATGCCTGGCGCC ACGATGCGGTCGCGGTGGCCAACGCAACCTGCATGAGTACCGTACTGCTGGCGCTGGCCGGCTGGGCCAGTGCCTGGTTC CTGCGCGATGCAGGACATCGGCGGCGTGCGCTGCTGGCATATCTGTGGGGACTGGGCTGGTGGACGCTGTGCGGCGTGCA CGAGATCCTGCGTTTTGCCGATCTGCGCAGCGAGCCGGATCTGCTGCTGGGCTTGGTCGCACTCAGTGTATGGCTGGCGG CCGAAGTGCATCGGCGCCGTCCTGCTGGGGCGCTGGTATGGACGGCGATGTCCGGTCTGGCGCTGGCGGCGCCATTGGCG CTGTGGCAAGGCGCAGCGCACACCCAGCCATTCGCGCATTGGGGCGCGTTGGCATGGGGTGTGTTTGCGGTGGCGGGCGC GCGCGCGTTGTGGTGCTTGCGCACGCAGCAAGGCGCTGGCGCGATGGCGGCGCAGTTCATCTGGTGGCTGCTGTGGCCGT TGGTCGTCTCGTTGGGCGCGGCCTGGCTGGCCGATGCGTTCTTGTTGGCCAATGGCTGGCGTTGCGCCTTGCTGGCGGCG CCGTGGTTGCTGGTGGCGACGCTGGGGCTGTTGCGTTGGCCATGGCTGGCCTGGCCGCAGGGAACCGGCTTCGATCCTGC ACGCAACGCGTTGCTGAGTTGCGTGTTCGCGGTATTGGGGCTCGGCTGGCTGCTCGCATTGCTGGATCCGGTGAGCGCTG CACCGTTGCCATGGCTGCCGTTGCTCAATCCCGCCGAGCTGGCGCAATTGGCGGTCCTGGCCTTGCTTGCGCGCTGGGCC TGGTCGGCACCCGCGCCGACATTGCTGCAGCATTGGCGCGTAAGTGCGCTGGGTGTGCTGGGTTGGGCGTTGAGCACCGG CAGTACCTTGCACAGCGTGCATCACTGGGGCGGTGTGCCGTGGGATTCGGCGCTGATCGGCGCCACCTTGTCGCAGACCA GCCTCACCATCGTCTGGAGCGTGCTCGGCGTGCTGGGCTGGGTGATCGGCTCGCGTCGTGGGCAACGCGGGCTGTGGCTG GGCGGCGCGTTGCTGATGGGACTGGTCCTGGCGAAGGTGGTGTTGGTCGACCGCCAGCATCTGGGCAACTTACTCGGCAT CGGCTCGTTCATGGCCTATGGCCTGTTGTGCACCGTGGTGGGCTATCTGGCGCCGGCACCGCCGCGTGCGGTTGCGACCG AAGGTCATGCTGTCCAAGAGAACGGCGTCGAAAAGGATCGGGAATGA
Upstream 100 bases:
>100_bases CGCTTCATCCATCGTCTGAGCGAGAGACTGTCTGCCCAGCCGCAGCCCGAGGCTGTATGGTGCGCGCATTCGGCTGGACG CCGGCTCGGGGATTGCTGCG
Downstream 100 bases:
>100_bases AAGCGATGCGATGGGCGCTGCTGCTGATGGTGCCGATGTTGGCGCAGGCCAGCGATGTGCGGCAGGACTACCGCCAGCAG TGGCCGCTGCAGATGACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 948; Mature: 948
Protein sequence:
>948_residues METIIVLVALVLLAVPVGVVIALVWIAGLRRRVAALEQRLAQWQSSGAGPADAPAQAPTDAQGRAWEQPDVASDVGAGPG AVADSDLPGYRTSVAAGQDVGSHAPAADHQAVGGSASAVPPPLPAQAPADAMAGSASATSERPSAQAQATRAQSAQLQSA QPQPPRLPAAPSAIARAASALKRWFTEGNVPVKVGMLVLLAGVASLLKYASDQGWMRMPTELRLAGISVLALAGLIFGWT QRAQRPGFALALQGGAIGGLLLTVFAAFKLYGLLDAGTALGISVVLIAGMCVLAVLQDSRTLAVLGVLAGFLAPIWLSTG SGNHVALFSYYAVLNAGIVAIAWTRPWRVLNLLGFAFTFGIGTAWGALQYSPAKFATTEPFLLLFFAMYVAIPVLHARRG DVSAGRLIDGSLLFGTPLVAFALQARLLEGDRLPLALCAVAVAALYAGLGSWLLRRASTRLLGQAHAMLAVGFATLAVPL ALSARATASVFALEGVGLLWLALRQQRWISQVSGVALQVFAAVGVAFGVDAWRHDAVAVANATCMSTVLLALAGWASAWF LRDAGHRRRALLAYLWGLGWWTLCGVHEILRFADLRSEPDLLLGLVALSVWLAAEVHRRRPAGALVWTAMSGLALAAPLA LWQGAAHTQPFAHWGALAWGVFAVAGARALWCLRTQQGAGAMAAQFIWWLLWPLVVSLGAAWLADAFLLANGWRCALLAA PWLLVATLGLLRWPWLAWPQGTGFDPARNALLSCVFAVLGLGWLLALLDPVSAAPLPWLPLLNPAELAQLAVLALLARWA WSAPAPTLLQHWRVSALGVLGWALSTGSTLHSVHHWGGVPWDSALIGATLSQTSLTIVWSVLGVLGWVIGSRRGQRGLWL GGALLMGLVLAKVVLVDRQHLGNLLGIGSFMAYGLLCTVVGYLAPAPPRAVATEGHAVQENGVEKDRE
Sequences:
>Translated_948_residues METIIVLVALVLLAVPVGVVIALVWIAGLRRRVAALEQRLAQWQSSGAGPADAPAQAPTDAQGRAWEQPDVASDVGAGPG AVADSDLPGYRTSVAAGQDVGSHAPAADHQAVGGSASAVPPPLPAQAPADAMAGSASATSERPSAQAQATRAQSAQLQSA QPQPPRLPAAPSAIARAASALKRWFTEGNVPVKVGMLVLLAGVASLLKYASDQGWMRMPTELRLAGISVLALAGLIFGWT QRAQRPGFALALQGGAIGGLLLTVFAAFKLYGLLDAGTALGISVVLIAGMCVLAVLQDSRTLAVLGVLAGFLAPIWLSTG SGNHVALFSYYAVLNAGIVAIAWTRPWRVLNLLGFAFTFGIGTAWGALQYSPAKFATTEPFLLLFFAMYVAIPVLHARRG DVSAGRLIDGSLLFGTPLVAFALQARLLEGDRLPLALCAVAVAALYAGLGSWLLRRASTRLLGQAHAMLAVGFATLAVPL ALSARATASVFALEGVGLLWLALRQQRWISQVSGVALQVFAAVGVAFGVDAWRHDAVAVANATCMSTVLLALAGWASAWF LRDAGHRRRALLAYLWGLGWWTLCGVHEILRFADLRSEPDLLLGLVALSVWLAAEVHRRRPAGALVWTAMSGLALAAPLA LWQGAAHTQPFAHWGALAWGVFAVAGARALWCLRTQQGAGAMAAQFIWWLLWPLVVSLGAAWLADAFLLANGWRCALLAA PWLLVATLGLLRWPWLAWPQGTGFDPARNALLSCVFAVLGLGWLLALLDPVSAAPLPWLPLLNPAELAQLAVLALLARWA WSAPAPTLLQHWRVSALGVLGWALSTGSTLHSVHHWGGVPWDSALIGATLSQTSLTIVWSVLGVLGWVIGSRRGQRGLWL GGALLMGLVLAKVVLVDRQHLGNLLGIGSFMAYGLLCTVVGYLAPAPPRAVATEGHAVQENGVEKDRE >Mature_948_residues METIIVLVALVLLAVPVGVVIALVWIAGLRRRVAALEQRLAQWQSSGAGPADAPAQAPTDAQGRAWEQPDVASDVGAGPG AVADSDLPGYRTSVAAGQDVGSHAPAADHQAVGGSASAVPPPLPAQAPADAMAGSASATSERPSAQAQATRAQSAQLQSA QPQPPRLPAAPSAIARAASALKRWFTEGNVPVKVGMLVLLAGVASLLKYASDQGWMRMPTELRLAGISVLALAGLIFGWT QRAQRPGFALALQGGAIGGLLLTVFAAFKLYGLLDAGTALGISVVLIAGMCVLAVLQDSRTLAVLGVLAGFLAPIWLSTG SGNHVALFSYYAVLNAGIVAIAWTRPWRVLNLLGFAFTFGIGTAWGALQYSPAKFATTEPFLLLFFAMYVAIPVLHARRG DVSAGRLIDGSLLFGTPLVAFALQARLLEGDRLPLALCAVAVAALYAGLGSWLLRRASTRLLGQAHAMLAVGFATLAVPL ALSARATASVFALEGVGLLWLALRQQRWISQVSGVALQVFAAVGVAFGVDAWRHDAVAVANATCMSTVLLALAGWASAWF LRDAGHRRRALLAYLWGLGWWTLCGVHEILRFADLRSEPDLLLGLVALSVWLAAEVHRRRPAGALVWTAMSGLALAAPLA LWQGAAHTQPFAHWGALAWGVFAVAGARALWCLRTQQGAGAMAAQFIWWLLWPLVVSLGAAWLADAFLLANGWRCALLAA PWLLVATLGLLRWPWLAWPQGTGFDPARNALLSCVFAVLGLGWLLALLDPVSAAPLPWLPLLNPAELAQLAVLALLARWA WSAPAPTLLQHWRVSALGVLGWALSTGSTLHSVHHWGGVPWDSALIGATLSQTSLTIVWSVLGVLGWVIGSRRGQRGLWL GGALLMGLVLAKVVLVDRQHLGNLLGIGSFMAYGLLCTVVGYLAPAPPRAVATEGHAVQENGVEKDRE
Specific function: Unknown
COG id: COG5373
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99447; Mature: 99447
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METIIVLVALVLLAVPVGVVIALVWIAGLRRRVAALEQRLAQWQSSGAGPADAPAQAPTD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AQGRAWEQPDVASDVGAGPGAVADSDLPGYRTSVAAGQDVGSHAPAADHQAVGGSASAVP CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PPLPAQAPADAMAGSASATSERPSAQAQATRAQSAQLQSAQPQPPRLPAAPSAIARAASA CCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH LKRWFTEGNVPVKVGMLVLLAGVASLLKYASDQGWMRMPTELRLAGISVLALAGLIFGWT HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHH QRAQRPGFALALQGGAIGGLLLTVFAAFKLYGLLDAGTALGISVVLIAGMCVLAVLQDSR HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC TLAVLGVLAGFLAPIWLSTGSGNHVALFSYYAVLNAGIVAIAWTRPWRVLNLLGFAFTFG HHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHH IGTAWGALQYSPAKFATTEPFLLLFFAMYVAIPVLHARRGDVSAGRLIDGSLLFGTPLVA HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHH FALQARLLEGDRLPLALCAVAVAALYAGLGSWLLRRASTRLLGQAHAMLAVGFATLAVPL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSARATASVFALEGVGLLWLALRQQRWISQVSGVALQVFAAVGVAFGVDAWRHDAVAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH NATCMSTVLLALAGWASAWFLRDAGHRRRALLAYLWGLGWWTLCGVHEILRFADLRSEPD HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LLLGLVALSVWLAAEVHRRRPAGALVWTAMSGLALAAPLALWQGAAHTQPFAHWGALAWG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH VFAVAGARALWCLRTQQGAGAMAAQFIWWLLWPLVVSLGAAWLADAFLLANGWRCALLAA HHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH PWLLVATLGLLRWPWLAWPQGTGFDPARNALLSCVFAVLGLGWLLALLDPVSAAPLPWLP HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LLNPAELAQLAVLALLARWAWSAPAPTLLQHWRVSALGVLGWALSTGSTLHSVHHWGGVP CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC WDSALIGATLSQTSLTIVWSVLGVLGWVIGSRRGQRGLWLGGALLMGLVLAKVVLVDRQH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH LGNLLGIGSFMAYGLLCTVVGYLAPAPPRAVATEGHAVQENGVEKDRE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure METIIVLVALVLLAVPVGVVIALVWIAGLRRRVAALEQRLAQWQSSGAGPADAPAQAPTD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC AQGRAWEQPDVASDVGAGPGAVADSDLPGYRTSVAAGQDVGSHAPAADHQAVGGSASAVP CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PPLPAQAPADAMAGSASATSERPSAQAQATRAQSAQLQSAQPQPPRLPAAPSAIARAASA CCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH LKRWFTEGNVPVKVGMLVLLAGVASLLKYASDQGWMRMPTELRLAGISVLALAGLIFGWT HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHH QRAQRPGFALALQGGAIGGLLLTVFAAFKLYGLLDAGTALGISVVLIAGMCVLAVLQDSR HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC TLAVLGVLAGFLAPIWLSTGSGNHVALFSYYAVLNAGIVAIAWTRPWRVLNLLGFAFTFG HHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHH IGTAWGALQYSPAKFATTEPFLLLFFAMYVAIPVLHARRGDVSAGRLIDGSLLFGTPLVA HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHH FALQARLLEGDRLPLALCAVAVAALYAGLGSWLLRRASTRLLGQAHAMLAVGFATLAVPL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSARATASVFALEGVGLLWLALRQQRWISQVSGVALQVFAAVGVAFGVDAWRHDAVAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH NATCMSTVLLALAGWASAWFLRDAGHRRRALLAYLWGLGWWTLCGVHEILRFADLRSEPD HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LLLGLVALSVWLAAEVHRRRPAGALVWTAMSGLALAAPLALWQGAAHTQPFAHWGALAWG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH VFAVAGARALWCLRTQQGAGAMAAQFIWWLLWPLVVSLGAAWLADAFLLANGWRCALLAA HHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH PWLLVATLGLLRWPWLAWPQGTGFDPARNALLSCVFAVLGLGWLLALLDPVSAAPLPWLP HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LLNPAELAQLAVLALLARWAWSAPAPTLLQHWRVSALGVLGWALSTGSTLHSVHHWGGVP CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC WDSALIGATLSQTSLTIVWSVLGVLGWVIGSRRGQRGLWLGGALLMGLVLAKVVLVDRQH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH LGNLLGIGSFMAYGLLCTVVGYLAPAPPRAVATEGHAVQENGVEKDRE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA