Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244060
Identifier: 21244060
GI number: 21244060
Start: 3931222
End: 3931821
Strand: Reverse
Name: 21244060
Synonym: XAC3336
Alternate gene names: NA
Gene position: 3931821-3931222 (Counterclockwise)
Preceding gene: 21244062
Following gene: 21244059
Centisome position: 75.97
GC content: 70.17
Gene sequence:
>600_bases TTGGGGCTGCAGCGGCTGGCCCATCCGGTTCTGGCGTGCCGGCTCCGGCGCATGCCTGGGCGCGGGTCATCCGGGTGTGA CCGGGCCAGCCGGGTGCGACATGCGGTCGCGCATCGGCCGCGACCATCGCCCCGGCTTGCGTGGCGGCTTACACTTCGAC GCATGCTGCGTTTGTCCCGTCGCCATCGGTTGTTGCCCCTGCTTGCCTGTCTGGCGGTGGCGCTAATGCTGGTCGCACCG CTGATCAGCCGCTGGAGCCAGGCGCAGCCGATCGAGCCGATGTGCATGGGTGTTCCAGCGTTGTCTGCAGCGCGCGCGCT GCATGCCGGTCATCGAACCCAGCCGGCCGGTCTGGCTGCGGACGCGCACTCCGGCGCCGTAGCGAACATGCAGCACGCCC GCACCCACGACGCAGCGACGCATGGGCACGCCTGCGATTACTGCGTCTTGGCCGCACGGTTGCTGCCATTGCTGATCGTG GCGTTGCTGTGCCTGCTGCAACCGCGGCCGGCGCCGGCTCCGGTGCTCACCCAGGCAGGCGCACGCTCGGTCTTTCGATG GGCCGCACTCGGCGCACGTGGACCACCGCTGGCCGCATAA
Upstream 100 bases:
>100_bases CAAGGCCCTTCATGTGTCTGCGGTCACAGAGGTCGGACGAAACTGTGACTGCCGACCAGGACGGCGGCGCGTGGACGAGG CCGGCGTGCGGTAAACGGGC
Downstream 100 bases:
>100_bases GGTGGCCCCTGTGCGGGCGTCCACGCAGCGATGCCCCGTGCGCGCCTGAGGTGTTCGGCGTCCCTGCCGGGCAGTGCGGG CGACTCGCGTCTTATCGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MGLQRLAHPVLACRLRRMPGRGSSGCDRASRVRHAVAHRPRPSPRLAWRLTLRRMLRLSRRHRLLPLLACLAVALMLVAP LISRWSQAQPIEPMCMGVPALSAARALHAGHRTQPAGLAADAHSGAVANMQHARTHDAATHGHACDYCVLAARLLPLLIV ALLCLLQPRPAPAPVLTQAGARSVFRWAALGARGPPLAA
Sequences:
>Translated_199_residues MGLQRLAHPVLACRLRRMPGRGSSGCDRASRVRHAVAHRPRPSPRLAWRLTLRRMLRLSRRHRLLPLLACLAVALMLVAP LISRWSQAQPIEPMCMGVPALSAARALHAGHRTQPAGLAADAHSGAVANMQHARTHDAATHGHACDYCVLAARLLPLLIV ALLCLLQPRPAPAPVLTQAGARSVFRWAALGARGPPLAA >Mature_198_residues GLQRLAHPVLACRLRRMPGRGSSGCDRASRVRHAVAHRPRPSPRLAWRLTLRRMLRLSRRHRLLPLLACLAVALMLVAPL ISRWSQAQPIEPMCMGVPALSAARALHAGHRTQPAGLAADAHSGAVANMQHARTHDAATHGHACDYCVLAARLLPLLIVA LLCLLQPRPAPAPVLTQAGARSVFRWAALGARGPPLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21415; Mature: 21284
Theoretical pI: Translated: 12.47; Mature: 12.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLQRLAHPVLACRLRRMPGRGSSGCDRASRVRHAVAHRPRPSPRLAWRLTLRRMLRLSR CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RHRLLPLLACLAVALMLVAPLISRWSQAQPIEPMCMGVPALSAARALHAGHRTQPAGLAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCC DAHSGAVANMQHARTHDAATHGHACDYCVLAARLLPLLIVALLCLLQPRPAPAPVLTQAG CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH ARSVFRWAALGARGPPLAA HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GLQRLAHPVLACRLRRMPGRGSSGCDRASRVRHAVAHRPRPSPRLAWRLTLRRMLRLSR CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RHRLLPLLACLAVALMLVAPLISRWSQAQPIEPMCMGVPALSAARALHAGHRTQPAGLAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCC DAHSGAVANMQHARTHDAATHGHACDYCVLAARLLPLLIVALLCLLQPRPAPAPVLTQAG CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH ARSVFRWAALGARGPPLAA HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA