Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is fecA [C]
Identifier: 21244059
GI number: 21244059
Start: 3929023
End: 3931083
Strand: Reverse
Name: fecA [C]
Synonym: XAC3334
Alternate gene names: 21244059
Gene position: 3931083-3929023 (Counterclockwise)
Preceding gene: 21244060
Following gene: 21244058
Centisome position: 75.95
GC content: 66.28
Gene sequence:
>2061_bases GTGCGGCCGTGCAGTCACGGCGAAGGGTTGGTCATGCGTCTGCGGTTGTTGAAAACGATGTGGTATGCGCCGTCGTTGGC GCTGGTGTGGGGGCCTGCATGCGATGTGCAGGCGCAAGACGCGGCACTCACGCTGGGCAAGGTGCAGGTGAGCGAACACG CGCAGCGCAGCCCGAGCACGGCGCGCGTGCTGAGCTCGGTGGATGTGATCGGCGGCGAGCTGCTGCACGATCAACATGTG GACTACAGCTGGGAACTGCTGATGCGCGCGCCCGGGGTGCAGGTCACCCAGTTCCGCATGGGCACCGATGCGGGGCGCTT TTCGTTCCGCGGATTCAATGGCGAGGGACGCATCAATGCGGTGAAACTGCTGATCGACGGCATCCCCAGCAACGACAATG CCGGCGCCATGCCGTACCTGGACGCGGTGTTTGCGCAGGACATCAGCGCCATCGAGATCGTGCGCGGCACCAACGACGCG CGCTATGGCTTGAATGCCATTGCCGGCAGCGTGGACGTGCTCACCCGTACCGGCGGCAACGACGGCCGCTTGAGCGTGAC GGCCGGCAGCTTCGATGCGCGCGAGGTGCAACTCAGCAAAGGGTTCGAACAGGGCGCCTGGAGCCAGAACTATGTGCTGG CCTGGCGCGACTCGGACGGGTATCGCGATCATGCCGACGCACGCAAACGCAGCGTGGCGGGCAAGTGGTTCTACACCGAC CCGGACGGTGCATTCCGCGCAGGGCTCACCACGCGGTACTACGACAACCACGCATTGGAAGCCGGCTATCTGGACGCCGC CACCGCGCGTGCGGCGCCGCGCAGCTCGCCGGACTATGCGCAGAACGACCGCAGCGAGCGTCGTGTGCGCCAGACTGCGT TGCATGCGGACGGTGCGCTCGGCGAGCAGGCGCAATGGAGCGCCAAGGCCTACCAGAACGACTACCGCAACCAACGCTGG GTGCGGTTTTCTGCGGCCGGGCTGCAGCAGGAACGCGATACCGACGAAACCCATCGCGGGCTGTTGCTGCGTAGCAACTG GCAGCCGGACTGGGGCGCGCTGCAGGCCAACCTGGAAGCCGGGGTGGATGCGCAGTGGCAGGACAACCAGTCGCAGCGGT ATCGCACCGTGGCCCGTGTGCGCGGGGCAAAGCTGCGCGATTGGGACTACGATCTGCGCACGCGTGGCGCGTATGTGCAG GCCGTGCTGACCCCCATTGCGCGCTTGCAGCTGGTGCCGGGGTATCGCATCGATCGTGTCGATGGACACCTGCATGACGT GCTGGCCGGCAGCATTGCGCCAACCTACGACTACGGCACCATCAAGCAACCCAAGTTCAGTGCGAGCTACCGCGTGGGCG AGCAGAGCAGCGTGTATGCGAACTGGGGACGTACGTTCCAGATCGGCAGCGGCGATGGCGCCTACCGTCGCCAGCCCGGC AACCTGGGGCCCTCGATCAACGACGGTTGGGAGACCGGCTTCAAGTTCGCGCCGTCGGCCCTGGTGGACGGGCGCCTGGC GTATTGGGAGCAGCGCGCATCCGGGGAGGTGGCGACTGTTTTCGGTGTCAATGGCGTGGTAGGCATCGGCGATGTGGCCA ATGTCGGCCGTACGCTGCGGCGCGGGTGGGATGCCCAGCTCAACGTGCAGCCGGCTGAGCATTGGCGCGCGTGGGTCTCG TATTCGCGGCAGAAGGCCAGCATCGCCACGCCCGATCCGAGCGCCCCGGCCACGCGCGGCAAGGAAATCGAAAACGTGCC GCACTGGTTGGCCACCGCCGGGCTGGAGTGGCAGGTCGGTTCATCGGTGCAGGTGAGCGCCTGGGGCAATGCGCAAGGCG ATTACTACCTGGAACGCACCAACACGCTGGGCCGCACCGGTGGCTACGCCTTGCTCAATCTGGGCGCGCGCTGGGCCGTG GATGCGCGCAATGCGCTCAGCCTGCAGCTACGCAACGTCACCGATCGTGCGTATGTGTACGCCTGGTACGACAGTGGCAG CTCCGGTTACTCACCCGGCGATGGGCGTGCGTTGTCGGTGTCGTGGGATTGGAGCTTCTGA
Upstream 100 bases:
>100_bases TGCGCGCCTGAGGTGTTCGGCGTCCCTGCCGGGCAGTGCGGGCGACTCGCGTCTTATCGAATGATGCCGATGCGCGCCGC GACGGTGGCAGCGTACGGCT
Downstream 100 bases:
>100_bases TGTCTGCAATCAACGATCGGGGAGGCGTCGCCGAGGCACGCCAGGGTAGCCGCTGGCGCTTCTATCGCGCGGTGTGGCGC TGGCATTTTTATGCCGGGCT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Domain Protein; NB-Dependent Outer Membrane Receptor; NB-Receptor Protein; Outer Membrane Receptor Protein; NB-Dependent Receptor YncD; NB-Dependent Receptor Plug Domain-Containing; Nb-Dependent Receptor; NB-Dependent Receptor For Iron Transport; NB-Dependent Siderophore Receptor Protein
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MRPCSHGEGLVMRLRLLKTMWYAPSLALVWGPACDVQAQDAALTLGKVQVSEHAQRSPSTARVLSSVDVIGGELLHDQHV DYSWELLMRAPGVQVTQFRMGTDAGRFSFRGFNGEGRINAVKLLIDGIPSNDNAGAMPYLDAVFAQDISAIEIVRGTNDA RYGLNAIAGSVDVLTRTGGNDGRLSVTAGSFDAREVQLSKGFEQGAWSQNYVLAWRDSDGYRDHADARKRSVAGKWFYTD PDGAFRAGLTTRYYDNHALEAGYLDAATARAAPRSSPDYAQNDRSERRVRQTALHADGALGEQAQWSAKAYQNDYRNQRW VRFSAAGLQQERDTDETHRGLLLRSNWQPDWGALQANLEAGVDAQWQDNQSQRYRTVARVRGAKLRDWDYDLRTRGAYVQ AVLTPIARLQLVPGYRIDRVDGHLHDVLAGSIAPTYDYGTIKQPKFSASYRVGEQSSVYANWGRTFQIGSGDGAYRRQPG NLGPSINDGWETGFKFAPSALVDGRLAYWEQRASGEVATVFGVNGVVGIGDVANVGRTLRRGWDAQLNVQPAEHWRAWVS YSRQKASIATPDPSAPATRGKEIENVPHWLATAGLEWQVGSSVQVSAWGNAQGDYYLERTNTLGRTGGYALLNLGARWAV DARNALSLQLRNVTDRAYVYAWYDSGSSGYSPGDGRALSVSWDWSF
Sequences:
>Translated_686_residues MRPCSHGEGLVMRLRLLKTMWYAPSLALVWGPACDVQAQDAALTLGKVQVSEHAQRSPSTARVLSSVDVIGGELLHDQHV DYSWELLMRAPGVQVTQFRMGTDAGRFSFRGFNGEGRINAVKLLIDGIPSNDNAGAMPYLDAVFAQDISAIEIVRGTNDA RYGLNAIAGSVDVLTRTGGNDGRLSVTAGSFDAREVQLSKGFEQGAWSQNYVLAWRDSDGYRDHADARKRSVAGKWFYTD PDGAFRAGLTTRYYDNHALEAGYLDAATARAAPRSSPDYAQNDRSERRVRQTALHADGALGEQAQWSAKAYQNDYRNQRW VRFSAAGLQQERDTDETHRGLLLRSNWQPDWGALQANLEAGVDAQWQDNQSQRYRTVARVRGAKLRDWDYDLRTRGAYVQ AVLTPIARLQLVPGYRIDRVDGHLHDVLAGSIAPTYDYGTIKQPKFSASYRVGEQSSVYANWGRTFQIGSGDGAYRRQPG NLGPSINDGWETGFKFAPSALVDGRLAYWEQRASGEVATVFGVNGVVGIGDVANVGRTLRRGWDAQLNVQPAEHWRAWVS YSRQKASIATPDPSAPATRGKEIENVPHWLATAGLEWQVGSSVQVSAWGNAQGDYYLERTNTLGRTGGYALLNLGARWAV DARNALSLQLRNVTDRAYVYAWYDSGSSGYSPGDGRALSVSWDWSF >Mature_686_residues MRPCSHGEGLVMRLRLLKTMWYAPSLALVWGPACDVQAQDAALTLGKVQVSEHAQRSPSTARVLSSVDVIGGELLHDQHV DYSWELLMRAPGVQVTQFRMGTDAGRFSFRGFNGEGRINAVKLLIDGIPSNDNAGAMPYLDAVFAQDISAIEIVRGTNDA RYGLNAIAGSVDVLTRTGGNDGRLSVTAGSFDAREVQLSKGFEQGAWSQNYVLAWRDSDGYRDHADARKRSVAGKWFYTD PDGAFRAGLTTRYYDNHALEAGYLDAATARAAPRSSPDYAQNDRSERRVRQTALHADGALGEQAQWSAKAYQNDYRNQRW VRFSAAGLQQERDTDETHRGLLLRSNWQPDWGALQANLEAGVDAQWQDNQSQRYRTVARVRGAKLRDWDYDLRTRGAYVQ AVLTPIARLQLVPGYRIDRVDGHLHDVLAGSIAPTYDYGTIKQPKFSASYRVGEQSSVYANWGRTFQIGSGDGAYRRQPG NLGPSINDGWETGFKFAPSALVDGRLAYWEQRASGEVATVFGVNGVVGIGDVANVGRTLRRGWDAQLNVQPAEHWRAWVS YSRQKASIATPDPSAPATRGKEIENVPHWLATAGLEWQVGSSVQVSAWGNAQGDYYLERTNTLGRTGGYALLNLGARWAV DARNALSLQLRNVTDRAYVYAWYDSGSSGYSPGDGRALSVSWDWSF
Specific function: Probable Receptor, Tonb-Dependent. [C]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75708; Mature: 75708
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS01140 GLYCOSYL_HYDROL_F45
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPCSHGEGLVMRLRLLKTMWYAPSLALVWGPACDVQAQDAALTLGKVQVSEHAQRSPST CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEEHHHHHHCCCCH ARVLSSVDVIGGELLHDQHVDYSWELLMRAPGVQVTQFRMGTDAGRFSFRGFNGEGRINA HHHHHHHHHHCCHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCCEEE VKLLIDGIPSNDNAGAMPYLDAVFAQDISAIEIVRGTNDARYGLNAIAGSVDVLTRTGGN EEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCEEEEEECCCC DGRLSVTAGSFDAREVQLSKGFEQGAWSQNYVLAWRDSDGYRDHADARKRSVAGKWFYTD CCEEEEEECCCCCEEEHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEC PDGAFRAGLTTRYYDNHALEAGYLDAATARAAPRSSPDYAQNDRSERRVRQTALHADGAL CCCCEECCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCC GEQAQWSAKAYQNDYRNQRWVRFSAAGLQQERDTDETHRGLLLRSNWQPDWGALQANLEA CCCHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCHHHCCEEEECCCCCCHHHEEECHHC GVDAQWQDNQSQRYRTVARVRGAKLRDWDYDLRTRGAYVQAVLTPIARLQLVPGYRIDRV CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHEEECCCCEEECC DGHLHDVLAGSIAPTYDYGTIKQPKFSASYRVGEQSSVYANWGRTFQIGSGDGAYRRQPG CCHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCEEECCCCEEEECCCCCCCCCCCC NLGPSINDGWETGFKFAPSALVDGRLAYWEQRASGEVATVFGVNGVVGIGDVANVGRTLR CCCCCCCCCHHCCCEECCHHHHCCHHHHHHHHCCCCEEEEEECCCCEECCHHHHHHHHHH RGWDAQLNVQPAEHWRAWVSYSRQKASIATPDPSAPATRGKEIENVPHWLATAGLEWQVG CCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHCCCEEECC SSVQVSAWGNAQGDYYLERTNTLGRTGGYALLNLGARWAVDARNALSLQLRNVTDRAYVY CEEEEEECCCCCCCEEEEECCCCCCCCCEEEEECCCEEEECCCCEEEEEEECCCCCEEEE AWYDSGSSGYSPGDGRALSVSWDWSF EEEECCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MRPCSHGEGLVMRLRLLKTMWYAPSLALVWGPACDVQAQDAALTLGKVQVSEHAQRSPST CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEEHHHHHHCCCCH ARVLSSVDVIGGELLHDQHVDYSWELLMRAPGVQVTQFRMGTDAGRFSFRGFNGEGRINA HHHHHHHHHHCCHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCCEEE VKLLIDGIPSNDNAGAMPYLDAVFAQDISAIEIVRGTNDARYGLNAIAGSVDVLTRTGGN EEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCEEEEEECCCC DGRLSVTAGSFDAREVQLSKGFEQGAWSQNYVLAWRDSDGYRDHADARKRSVAGKWFYTD CCEEEEEECCCCCEEEHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEC PDGAFRAGLTTRYYDNHALEAGYLDAATARAAPRSSPDYAQNDRSERRVRQTALHADGAL CCCCEECCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCC GEQAQWSAKAYQNDYRNQRWVRFSAAGLQQERDTDETHRGLLLRSNWQPDWGALQANLEA CCCHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCHHHCCEEEECCCCCCHHHEEECHHC GVDAQWQDNQSQRYRTVARVRGAKLRDWDYDLRTRGAYVQAVLTPIARLQLVPGYRIDRV CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHEEECCCCEEECC DGHLHDVLAGSIAPTYDYGTIKQPKFSASYRVGEQSSVYANWGRTFQIGSGDGAYRRQPG CCHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCEEECCCCEEEECCCCCCCCCCCC NLGPSINDGWETGFKFAPSALVDGRLAYWEQRASGEVATVFGVNGVVGIGDVANVGRTLR CCCCCCCCCHHCCCEECCHHHHCCHHHHHHHHCCCCEEEEEECCCCEECCHHHHHHHHHH RGWDAQLNVQPAEHWRAWVSYSRQKASIATPDPSAPATRGKEIENVPHWLATAGLEWQVG CCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHCCCEEECC SSVQVSAWGNAQGDYYLERTNTLGRTGGYALLNLGARWAVDARNALSLQLRNVTDRAYVY CEEEEEECCCCCCCEEEEECCCCCCCCCEEEEECCCEEEECCCCEEEEEEECCCCCEEEE AWYDSGSSGYSPGDGRALSVSWDWSF EEEECCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA