Click here to switch to the map view.

The map label for this gene is 21242434

Identifier: 21242434

GI number: 21242434

Start: 1942040

End: 1943383

Strand: Reverse

Name: 21242434

Synonym: XAC1685

Alternate gene names: NA

Gene position: 1943383-1942040 (Counterclockwise)

Preceding gene: 77748605

Following gene: 77748604

Centisome position: 37.55

GC content: 64.66

Gene sequence:

>1344_bases
ATGCCCGCTTTCCAGCCCGCCCCGCGTTGCACCGCCACGCGTACTGCCTGCCTGACGTCCTTGTTGTGCGTGTCCGGCCC
CTTGTTGCTACTGGCCAGCACGCAGGCGCAGGCGATTCCCTCGTTCGCGCGCCAGACCGGCTCGTCCTGCGCCGATTGCC
ATGTCGGTTCCTATGGCCCCTCGCTCACGCCCTACGGCATGCGCTTCAAGCTCGGCGGTTTTACCGATACCGATGGCGAA
GGCACCAAGATCCCGGTGTCCGGCCAGCTCACCTGGTCGCGCAACAACCCCAGCCGCGGCGACAGCACCTCGCGCCTGCG
CGAAGCCGATCTGTATCTGGGCGGCCGCCTTAACGACAACATCGGTGGCTATTCGAAGATCCGCTCCAACAACAGCGGCA
ATGCGACCTTCGATACGCGCCTGGACGACGTCGATCTGCGCTTTGTCGGCAAGCCGTTCCAGATAGCGGGCAAGGACACC
ATGATCGGTGTCAGCGTCAACAACAACCCGGGCATTTCCGACCCGGTGCATGTGTTGCCGAACGCCTCCACGCTCACCCC
TGCCTCCAATGGCGGTGCCTCCACCATGCTCAGCTCCTCGGCGCTGTCCAACCGCGTCGTCGGCGCCAGCGTCTACGGCC
TGTACGACCGCAATTGGTACGGCGAAGTGGGCAGCTACAGCGCGCTGTCGCCGTCTGCGCAGGACCGCCTCGGCTGGCCG
GTCAACGGCGACCCGGGCAAGCTCAGCGATACCAGCTATGCGCGTCTTGCCTACATGAAGGACATGAAGCGCCAGTTCTT
CTCGGTGGGCCTGACCGCGCTCACTACGCGCCGCCAGCCGCTGCGCACCGGGCCCAGCGACGACCTCACCGATTTCGGCT
ACGACCTGACCTACCAATTCCTCGGCACCCGCGAGCACGTGCTGTCGCTGGCCTACGTCAACATCTACGAGCGTCGCAAA
TACGGCAGCCCGCTGATGCCGACCGATCCCACCCTGCCGGCGCTGGACCGGGGCAGCGTGCGCGATCAGACCCTCAGCAT
GAACTACGCCTTCAAGCAGACCTACGGCGTGCTGGCCGCGCACATGATCAACAGCGGCTCGTTCGATGCGGCGCGCTATT
CGCCGGTGGGTATCCCGGACACCACCAGCAATCTGATCCTGCTGTACTGGACCCCGTTCGGCAAGGACGGCACCTATACC
TCGATGGCCAATCTGCGCGTGTCCGCCGGCTGGTTCCGTTTCGACAAGTTCAACGGCAGTACCTCCAACGTCTTCCGTGG
CCCGCCGATCACCAATCCGCGCGATCTCGACAGCTTCACCCTGTCGGTCAACCTGGCCTTCTGA

Upstream 100 bases:

>100_bases
CGGGCAAGCGCGCATGAGCCGCCGCCCCCCGCCGTCTGTCATTCGTTTTCTCGCCGATTCCCGCACCACTGCATCCCGCA
CCGTCGAACAAGGACTTTCC

Downstream 100 bases:

>100_bases
CCCCTCCCGCACCTGTACGGATCCACATGAACTCACCACGCAAACTCTCCGTGTTGTGCGCCCCATTGGCCGGGCTGATG
CTGGCAGGCGCACTGCCTGT

Product: cytochrome C

Products: NA

Alternate protein names: Cytochrome C1 Protein; Cytochrome C; Cytochrome C Protein

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MPAFQPAPRCTATRTACLTSLLCVSGPLLLLASTQAQAIPSFARQTGSSCADCHVGSYGPSLTPYGMRFKLGGFTDTDGE
GTKIPVSGQLTWSRNNPSRGDSTSRLREADLYLGGRLNDNIGGYSKIRSNNSGNATFDTRLDDVDLRFVGKPFQIAGKDT
MIGVSVNNNPGISDPVHVLPNASTLTPASNGGASTMLSSSALSNRVVGASVYGLYDRNWYGEVGSYSALSPSAQDRLGWP
VNGDPGKLSDTSYARLAYMKDMKRQFFSVGLTALTTRRQPLRTGPSDDLTDFGYDLTYQFLGTREHVLSLAYVNIYERRK
YGSPLMPTDPTLPALDRGSVRDQTLSMNYAFKQTYGVLAAHMINSGSFDAARYSPVGIPDTTSNLILLYWTPFGKDGTYT
SMANLRVSAGWFRFDKFNGSTSNVFRGPPITNPRDLDSFTLSVNLAF

Sequences:

>Translated_447_residues
MPAFQPAPRCTATRTACLTSLLCVSGPLLLLASTQAQAIPSFARQTGSSCADCHVGSYGPSLTPYGMRFKLGGFTDTDGE
GTKIPVSGQLTWSRNNPSRGDSTSRLREADLYLGGRLNDNIGGYSKIRSNNSGNATFDTRLDDVDLRFVGKPFQIAGKDT
MIGVSVNNNPGISDPVHVLPNASTLTPASNGGASTMLSSSALSNRVVGASVYGLYDRNWYGEVGSYSALSPSAQDRLGWP
VNGDPGKLSDTSYARLAYMKDMKRQFFSVGLTALTTRRQPLRTGPSDDLTDFGYDLTYQFLGTREHVLSLAYVNIYERRK
YGSPLMPTDPTLPALDRGSVRDQTLSMNYAFKQTYGVLAAHMINSGSFDAARYSPVGIPDTTSNLILLYWTPFGKDGTYT
SMANLRVSAGWFRFDKFNGSTSNVFRGPPITNPRDLDSFTLSVNLAF
>Mature_446_residues
PAFQPAPRCTATRTACLTSLLCVSGPLLLLASTQAQAIPSFARQTGSSCADCHVGSYGPSLTPYGMRFKLGGFTDTDGEG
TKIPVSGQLTWSRNNPSRGDSTSRLREADLYLGGRLNDNIGGYSKIRSNNSGNATFDTRLDDVDLRFVGKPFQIAGKDTM
IGVSVNNNPGISDPVHVLPNASTLTPASNGGASTMLSSSALSNRVVGASVYGLYDRNWYGEVGSYSALSPSAQDRLGWPV
NGDPGKLSDTSYARLAYMKDMKRQFFSVGLTALTTRRQPLRTGPSDDLTDFGYDLTYQFLGTREHVLSLAYVNIYERRKY
GSPLMPTDPTLPALDRGSVRDQTLSMNYAFKQTYGVLAAHMINSGSFDAARYSPVGIPDTTSNLILLYWTPFGKDGTYTS
MANLRVSAGWFRFDKFNGSTSNVFRGPPITNPRDLDSFTLSVNLAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48427; Mature: 48296

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFQPAPRCTATRTACLTSLLCVSGPLLLLASTQAQAIPSFARQTGSSCADCHVGSYGP
CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC
SLTPYGMRFKLGGFTDTDGEGTKIPVSGQLTWSRNNPSRGDSTSRLREADLYLGGRLNDN
CCCCCCEEEEECCCCCCCCCCCEEEECCEEEECCCCCCCCCHHHHHHHHHEEECCEECCC
IGGYSKIRSNNSGNATFDTRLDDVDLRFVGKPFQIAGKDTMIGVSVNNNPGISDPVHVLP
CCCCHHHCCCCCCCEEEECCCCCEEEEEECCCEEECCCCEEEEEEECCCCCCCCCEEECC
NASTLTPASNGGASTMLSSSALSNRVVGASVYGLYDRNWYGEVGSYSALSPSAQDRLGWP
CCCEECCCCCCCHHHHHHHHHHHCCEECEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCC
VNGDPGKLSDTSYARLAYMKDMKRQFFSVGLTALTTRRQPLRTGPSDDLTDFGYDLTYQF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEEE
LGTREHVLSLAYVNIYERRKYGSPLMPTDPTLPALDRGSVRDQTLSMNYAFKQTYGVLAA
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHH
HMINSGSFDAARYSPVGIPDTTSNLILLYWTPFGKDGTYTSMANLRVSAGWFRFDKFNGS
HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCEEEEEECCCC
TSNVFRGPPITNPRDLDSFTLSVNLAF
CCCEECCCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure 
PAFQPAPRCTATRTACLTSLLCVSGPLLLLASTQAQAIPSFARQTGSSCADCHVGSYGP
CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC
SLTPYGMRFKLGGFTDTDGEGTKIPVSGQLTWSRNNPSRGDSTSRLREADLYLGGRLNDN
CCCCCCEEEEECCCCCCCCCCCEEEECCEEEECCCCCCCCCHHHHHHHHHEEECCEECCC
IGGYSKIRSNNSGNATFDTRLDDVDLRFVGKPFQIAGKDTMIGVSVNNNPGISDPVHVLP
CCCCHHHCCCCCCCEEEECCCCCEEEEEECCCEEECCCCEEEEEEECCCCCCCCCEEECC
NASTLTPASNGGASTMLSSSALSNRVVGASVYGLYDRNWYGEVGSYSALSPSAQDRLGWP
CCCEECCCCCCCHHHHHHHHHHHCCEECEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCC
VNGDPGKLSDTSYARLAYMKDMKRQFFSVGLTALTTRRQPLRTGPSDDLTDFGYDLTYQF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEEE
LGTREHVLSLAYVNIYERRKYGSPLMPTDPTLPALDRGSVRDQTLSMNYAFKQTYGVLAA
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHH
HMINSGSFDAARYSPVGIPDTTSNLILLYWTPFGKDGTYTSMANLRVSAGWFRFDKFNGS
HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCEEEEEECCCC
TSNVFRGPPITNPRDLDSFTLSVNLAF
CCCEECCCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA