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The map label for this gene is cycA

Identifier: 77748604

GI number: 77748604

Start: 1941621

End: 1941986

Strand: Reverse

Name: cycA

Synonym: XAC1684

Alternate gene names: NA

Gene position: 1941986-1941621 (Counterclockwise)

Preceding gene: 21242434

Following gene: 21242432

Centisome position: 37.52

GC content: 62.84

Gene sequence:

>366_bases
TTGTGCGCCCCATTGGCCGGGCTGATGCTGGCAGGCGCACTGCCTGTGCCCTCGGCATACGCTGCCGACGGCGCCAACGT
CTTCCTCACCGAATGCGGTGAATGCCACAGCGTCAAACCGGGCAAGAACAAGAAGGGCCCATCGCTGTTCGGCGTGGCAG
GACGCCCTGCCGGTACCGTCGCCGACTTCGGCGGTTATTCCGACGCGCTCAAGAACAGCAAGTGGACCTGGACCCCGGCC
CAGCTCAAGACCTATCTATCGCAATCCTCGTCCAAGGCGCTGCCGGGCACCAAGATGAAATACGACGGCCTGGACGACCC
CAAGGAGCTCGACGCGCTGATCGCCTACCTCAACACCTTGAAATAG

Upstream 100 bases:

>100_bases
CGCGCGATCTCGACAGCTTCACCCTGTCGGTCAACCTGGCCTTCTGACCCCTCCCGCACCTGTACGGATCCACATGAACT
CACCACGCAAACTCTCCGTG

Downstream 100 bases:

>100_bases
GCGCGGCCTACGCGGCATGGCGCGTCGTCGCCCGAGGGGGCGGACGGATGGCGCGCCAATCGCACCGCGCGTGCATGCCC
GCGGTCCCGGTCGTCTGTCC

Product: cytochrome C2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MCAPLAGLMLAGALPVPSAYAADGANVFLTECGECHSVKPGKNKKGPSLFGVAGRPAGTVADFGGYSDALKNSKWTWTPA
QLKTYLSQSSSKALPGTKMKYDGLDDPKELDALIAYLNTLK

Sequences:

>Translated_121_residues
MCAPLAGLMLAGALPVPSAYAADGANVFLTECGECHSVKPGKNKKGPSLFGVAGRPAGTVADFGGYSDALKNSKWTWTPA
QLKTYLSQSSSKALPGTKMKYDGLDDPKELDALIAYLNTLK
>Mature_121_residues
MCAPLAGLMLAGALPVPSAYAADGANVFLTECGECHSVKPGKNKKGPSLFGVAGRPAGTVADFGGYSDALKNSKWTWTPA
QLKTYLSQSSSKALPGTKMKYDGLDDPKELDALIAYLNTLK

Specific function: Unknown

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=95, Percent_Identity=40, Blast_Score=66, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17539604, Length=104, Percent_Identity=39.4230769230769, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17566554, Length=104, Percent_Identity=37.5, Blast_Score=65, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320796, Length=98, Percent_Identity=38.7755102040816, Blast_Score=70, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6322508, Length=98, Percent_Identity=38.7755102040816, Blast_Score=65, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17137228, Length=107, Percent_Identity=41.1214953271028, Blast_Score=77, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17137204, Length=105, Percent_Identity=40.9523809523809, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12639; Mature: 12639

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCAPLAGLMLAGALPVPSAYAADGANVFLTECGECHSVKPGKNKKGPSLFGVAGRPAGTV
CCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCC
ADFGGYSDALKNSKWTWTPAQLKTYLSQSSSKALPGTKMKYDGLDDPKELDALIAYLNTL
CCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHC
K
C
>Mature Secondary Structure
MCAPLAGLMLAGALPVPSAYAADGANVFLTECGECHSVKPGKNKKGPSLFGVAGRPAGTV
CCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCC
ADFGGYSDALKNSKWTWTPAQLKTYLSQSSSKALPGTKMKYDGLDDPKELDALIAYLNTL
CCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2823792; 8809072 [H]