Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242422
Identifier: 21242422
GI number: 21242422
Start: 1932529
End: 1933230
Strand: Reverse
Name: 21242422
Synonym: XAC1673
Alternate gene names: NA
Gene position: 1933230-1932529 (Counterclockwise)
Preceding gene: 21242423
Following gene: 21242419
Centisome position: 37.35
GC content: 66.95
Gene sequence:
>702_bases ATGGCAGGTTTTTATGTCGCAAGCGCCGTGCTGGTGGCGCTGGCCTTGCTGCTGTTGCTGGCACCATTGCTGCGCCGCCC CACCGGCAGCGGTCATGCGCGTGACCGCTTGGCAATCCTGCTGGCGCTGGGCCTGCCGCTGGCCACGGCCGGGTTGTACC GGCTGGTGGGCGCGCCGGAGGCGATCGTCACGCATGTGGATGCAGCGCAGCCAGCACACGTGGCCCCGCTGCCACCATCC GCAGTTGCAGGGCAGGCGCGAGCGGCAAACGCCATCGCCGACGCGCAGGAGCTGGCGTTGGATCGCTTCATGCAGCAGGC CAAGACGTTCGAGCAGAACGACCGCCCCGCCGAGGCGCGCGAGGCATATGCACAAGTGCTCAGAATCGCTCCCGATATCA GCGCCGCCATTGTGGGCTGGGTCGCGGCGGATATGGCCACGCACGACGATTTCGCCATCGACGCCGCATCGCGCGCACGC CTGCAGCAGGTGATCGCACGCGAGCCGGACAACCAGCGTGGACTCTGGTTGTTGGGCATCAGCGATTTTCAACAGCAGGA CTTCGCCGCGGCCACGGCGCACTGGCGGCATCTGCACGGTTTGCTGGAAACCGGATCGCCGATGCAGAAAGCGGTGGCAG ACAAGATCGCGGTGGCCGAATCGATGGCCAGCGCACGGCAATCTGCGCGTGGGACGCGCTGA
Upstream 100 bases:
>100_bases CGCTGATGTTGCTTGCTGGTGCGGGCGTGGTCATCCACACCGTGCGCAAACGTGCGCGCGCCGGCACGCCGGTGGCGCCG CACGCGGAGGAAGAATGGTG
Downstream 100 bases:
>100_bases ACAGTGGCAACCCCGCGTGATGCGGTCTGATTGGCGATGGCTGCAATGCAGTGCAATTGCACAGCGCGTGCAAACTGCCA AGCAGCCGGTTCACGCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MAGFYVASAVLVALALLLLLAPLLRRPTGSGHARDRLAILLALGLPLATAGLYRLVGAPEAIVTHVDAAQPAHVAPLPPS AVAGQARAANAIADAQELALDRFMQQAKTFEQNDRPAEAREAYAQVLRIAPDISAAIVGWVAADMATHDDFAIDAASRAR LQQVIAREPDNQRGLWLLGISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKIAVAESMASARQSARGTR
Sequences:
>Translated_233_residues MAGFYVASAVLVALALLLLLAPLLRRPTGSGHARDRLAILLALGLPLATAGLYRLVGAPEAIVTHVDAAQPAHVAPLPPS AVAGQARAANAIADAQELALDRFMQQAKTFEQNDRPAEAREAYAQVLRIAPDISAAIVGWVAADMATHDDFAIDAASRAR LQQVIAREPDNQRGLWLLGISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKIAVAESMASARQSARGTR >Mature_232_residues AGFYVASAVLVALALLLLLAPLLRRPTGSGHARDRLAILLALGLPLATAGLYRLVGAPEAIVTHVDAAQPAHVAPLPPSA VAGQARAANAIADAQELALDRFMQQAKTFEQNDRPAEAREAYAQVLRIAPDISAAIVGWVAADMATHDDFAIDAASRARL QQVIAREPDNQRGLWLLGISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKIAVAESMASARQSARGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24712; Mature: 24580
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFYVASAVLVALALLLLLAPLLRRPTGSGHARDRLAILLALGLPLATAGLYRLVGAPE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH AIVTHVDAAQPAHVAPLPPSAVAGQARAANAIADAQELALDRFMQQAKTFEQNDRPAEAR HHHHHCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EAYAQVLRIAPDISAAIVGWVAADMATHDDFAIDAASRARLQQVIAREPDNQRGLWLLGI HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC SDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKIAVAESMASARQSARGTR CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AGFYVASAVLVALALLLLLAPLLRRPTGSGHARDRLAILLALGLPLATAGLYRLVGAPE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH AIVTHVDAAQPAHVAPLPPSAVAGQARAANAIADAQELALDRFMQQAKTFEQNDRPAEAR HHHHHCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EAYAQVLRIAPDISAAIVGWVAADMATHDDFAIDAASRARLQQVIAREPDNQRGLWLLGI HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC SDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKIAVAESMASARQSARGTR CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA